EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000000293 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2148 bases
Position: chr14:1477139-1479286
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000000537	Not3	PF04065.15	4.7e-88	1	1
ENSCINP00000000537	NOT2_3_5	PF04153.18	4.5e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000000537	-	2079	-	ENSCINP00000000537	692 (aa)	-	F6ZZH3

Gene Model

Click here to download ENSCING00000000293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000000293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000000293	-	57	69.099	ENSAPOG00000015499	CNOT3	91	69.099	Acanthochromis_polyacanthus
ENSCING00000000293	-	68	68.240	ENSAMEG00000004528	CNOT3	100	49.369	Ailuropoda_melanoleuca
ENSCING00000000293	-	71	68.182	ENSACIG00000006635	cnot3a	100	46.457	Amphilophus_citrinellus
ENSCING00000000293	-	68	66.667	ENSACIG00000003652	cnot3b	76	66.667	Amphilophus_citrinellus
ENSCING00000000293	-	64	64.831	ENSAOCG00000018385	-	100	46.232	Amphiprion_ocellaris
ENSCING00000000293	-	70	67.769	ENSAOCG00000023769	cnot3a	56	67.769	Amphiprion_ocellaris
ENSCING00000000293	-	95	64.831	ENSAPEG00000002640	cnot3b	100	47.832	Amphiprion_percula
ENSCING00000000293	-	72	67.769	ENSAPEG00000006624	cnot3a	57	67.769	Amphiprion_percula
ENSCING00000000293	-	71	67.355	ENSATEG00000015777	cnot3b	78	54.849	Anabas_testudineus
ENSCING00000000293	-	72	67.769	ENSATEG00000022737	cnot3a	76	56.940	Anabas_testudineus
ENSCING00000000293	-	100	49.464	ENSACAG00000016085	CNOT3	100	50.000	Anolis_carolinensis
ENSCING00000000293	-	94	68.240	ENSANAG00000025756	CNOT3	100	50.195	Aotus_nancymaae
ENSCING00000000293	-	71	67.769	ENSACLG00000021136	cnot3a	57	67.769	Astatotilapia_calliptera
ENSCING00000000293	-	71	67.355	ENSACLG00000016702	cnot3b	80	55.140	Astatotilapia_calliptera
ENSCING00000000293	-	74	68.595	ENSAMXG00000012359	cnot3a	82	50.997	Astyanax_mexicanus
ENSCING00000000293	-	68	70.536	ENSAMXG00000009447	cnot3b	100	47.418	Astyanax_mexicanus
ENSCING00000000293	-	83	68.240	ENSCJAG00000001094	CNOT3	100	48.557	Callithrix_jacchus
ENSCING00000000293	-	68	68.182	ENSTSYG00000008058	CNOT3	100	49.367	Carlito_syrichta
ENSCING00000000293	-	94	68.240	ENSCCAG00000036290	CNOT3	100	50.653	Cebus_capucinus
ENSCING00000000293	-	100	50.740	ENSCPBG00000011655	CNOT3	100	50.661	Chrysemys_picta_bellii
ENSCING00000000293	-	64	53.953	ENSCGRG00000012929	Cnot3	71	53.953	Cricetulus_griseus_crigri
ENSCING00000000293	-	72	67.769	ENSCSEG00000003574	cnot3a	79	54.259	Cynoglossus_semilaevis
ENSCING00000000293	-	68	63.636	ENSCSEG00000016892	cnot3b	100	46.867	Cynoglossus_semilaevis
ENSCING00000000293	-	71	69.008	ENSCVAG00000008168	cnot3a	67	69.008	Cyprinodon_variegatus
ENSCING00000000293	-	70	69.820	ENSCVAG00000022122	cnot3b	84	54.167	Cyprinodon_variegatus
ENSCING00000000293	-	75	68.595	ENSDARG00000007135	cnot3a	66	68.595	Danio_rerio
ENSCING00000000293	-	75	66.534	ENSDARG00000019842	cnot3b	64	60.498	Danio_rerio
ENSCING00000000293	-	68	68.103	ENSDNOG00000045972	CNOT3	100	48.473	Dasypus_novemcinctus
ENSCING00000000293	-	100	48.761	ENSDORG00000008021	Cnot3	100	78.161	Dipodomys_ordii
ENSCING00000000293	-	60	68.208	FBgn0033029	Not3	50	69.461	Drosophila_melanogaster
ENSCING00000000293	-	56	96.875	ENSETEG00000006305	CNOT3	61	96.875	Echinops_telfairi
ENSCING00000000293	-	89	59.124	ENSEBUG00000010437	cnot3a	100	46.985	Eptatretus_burgeri
ENSCING00000000293	-	75	66.932	ENSELUG00000000953	cnot3b	86	48.052	Esox_lucius
ENSCING00000000293	-	71	69.957	ENSELUG00000014743	cnot3a	54	69.957	Esox_lucius
ENSCING00000000293	-	71	69.957	ENSFHEG00000023166	cnot3a	78	69.957	Fundulus_heteroclitus
ENSCING00000000293	-	71	70.270	ENSFHEG00000001696	cnot3b	82	56.289	Fundulus_heteroclitus
ENSCING00000000293	-	63	63.563	ENSGMOG00000005365	cnot3a	69	54.829	Gadus_morhua
ENSCING00000000293	-	71	68.443	ENSGAFG00000013094	cnot3a	64	57.547	Gambusia_affinis
ENSCING00000000293	-	68	70.721	ENSGAFG00000003459	cnot3b	96	50.130	Gambusia_affinis
ENSCING00000000293	-	62	63.525	ENSGACG00000011489	cnot3a	69	54.180	Gasterosteus_aculeatus
ENSCING00000000293	-	99	50.674	ENSGAGG00000012677	CNOT3	99	51.275	Gopherus_agassizii
ENSCING00000000293	-	68	68.240	ENSGGOG00000012996	CNOT3	100	50.850	Gorilla_gorilla
ENSCING00000000293	-	71	67.769	ENSHBUG00000005275	cnot3a	57	67.769	Haplochromis_burtoni
ENSCING00000000293	-	72	67.769	ENSHCOG00000020968	cnot3a	72	69.099	Hippocampus_comes
ENSCING00000000293	-	88	68.670	ENSIPUG00000000167	cnot3	82	68.670	Ictalurus_punctatus
ENSCING00000000293	-	98	61.818	ENSJJAG00000014594	Cnot3	100	78.161	Jaculus_jaculus
ENSCING00000000293	-	66	69.912	ENSKMAG00000018723	cnot3b	89	48.564	Kryptolebias_marmoratus
ENSCING00000000293	-	72	67.769	ENSKMAG00000004863	cnot3a	100	49.713	Kryptolebias_marmoratus
ENSCING00000000293	-	73	67.331	ENSLBEG00000018278	cnot3b	68	58.805	Labrus_bergylta
ENSCING00000000293	-	69	81.707	ENSLOCG00000000005	cnot3b	100	49.574	Lepisosteus_oculatus
ENSCING00000000293	-	72	67.490	ENSLAFG00000022133	CNOT3	100	45.718	Loxodonta_africana
ENSCING00000000293	-	72	67.769	ENSMAMG00000019397	cnot3a	79	53.271	Mastacembelus_armatus
ENSCING00000000293	-	68	65.702	ENSMAMG00000019357	cnot3b	93	51.917	Mastacembelus_armatus
ENSCING00000000293	-	71	67.355	ENSMZEG00005002466	cnot3b	83	52.083	Maylandia_zebra
ENSCING00000000293	-	71	67.769	ENSMZEG00005016304	cnot3a	57	67.769	Maylandia_zebra
ENSCING00000000293	-	65	96.875	ENSMOCG00000013249	Cnot3	93	96.875	Microtus_ochrogaster
ENSCING00000000293	-	69	65.678	ENSMMOG00000013086	cnot3b	73	65.678	Mola_mola
ENSCING00000000293	-	70	64.378	ENSMMOG00000016446	cnot3a	66	64.378	Mola_mola
ENSCING00000000293	-	71	68.182	ENSMALG00000009204	cnot3a	63	58.176	Monopterus_albus
ENSCING00000000293	-	71	67.769	ENSNBRG00000002401	cnot3a	57	67.769	Neolamprologus_brichardi
ENSCING00000000293	-	68	64.831	ENSNBRG00000003336	cnot3b	87	61.441	Neolamprologus_brichardi
ENSCING00000000293	-	51	94.872	ENSOPRG00000001605	-	61	94.872	Ochotona_princeps
ENSCING00000000293	-	71	67.623	ENSONIG00000006568	cnot3a	65	57.862	Oreochromis_niloticus
ENSCING00000000293	-	71	66.942	ENSONIG00000007047	cnot3b	83	52.679	Oreochromis_niloticus
ENSCING00000000293	-	66	71.239	ENSORLG00000005982	cnot3b	76	57.193	Oryzias_latipes
ENSCING00000000293	-	71	67.769	ENSORLG00000011174	cnot3a	67	57.862	Oryzias_latipes
ENSCING00000000293	-	71	67.769	ENSORLG00020008009	cnot3a	66	57.547	Oryzias_latipes_hni
ENSCING00000000293	-	66	71.239	ENSORLG00020005779	cnot3b	76	57.762	Oryzias_latipes_hni
ENSCING00000000293	-	71	67.769	ENSORLG00015013729	cnot3a	67	57.547	Oryzias_latipes_hsok
ENSCING00000000293	-	66	71.239	ENSORLG00015019021	cnot3b	79	56.940	Oryzias_latipes_hsok
ENSCING00000000293	-	86	67.623	ENSOMEG00000010309	cnot3a	100	48.956	Oryzias_melastigma
ENSCING00000000293	-	66	69.912	ENSOMEG00000015557	cnot3b	65	80.488	Oryzias_melastigma
ENSCING00000000293	-	68	68.240	ENSPTIG00000008781	CNOT3	100	51.140	Panthera_tigris_altaica
ENSCING00000000293	-	71	69.957	ENSPKIG00000015967	-	100	51.000	Paramormyrops_kingsleyae
ENSCING00000000293	-	59	80.488	ENSPKIG00000011733	CNOT3	73	80.488	Paramormyrops_kingsleyae
ENSCING00000000293	-	68	63.964	ENSPMGG00000022539	cnot3b	58	63.964	Periophthalmus_magnuspinnatus
ENSCING00000000293	-	60	79.885	ENSPCIG00000023018	CNOT3	100	68.182	Phascolarctos_cinereus
ENSCING00000000293	-	71	70.270	ENSPFOG00000007168	cnot3b	81	56.508	Poecilia_formosa
ENSCING00000000293	-	71	68.595	ENSPFOG00000008693	cnot3a	100	48.469	Poecilia_formosa
ENSCING00000000293	-	71	68.595	ENSPLAG00000013324	cnot3a	78	55.482	Poecilia_latipinna
ENSCING00000000293	-	71	70.270	ENSPLAG00000013457	cnot3b	81	56.508	Poecilia_latipinna
ENSCING00000000293	-	71	70.270	ENSPMEG00000010184	cnot3b	81	56.825	Poecilia_mexicana
ENSCING00000000293	-	71	68.595	ENSPMEG00000017718	cnot3a	78	55.482	Poecilia_mexicana
ENSCING00000000293	-	66	64.444	ENSPREG00000000662	cnot3b	76	60.071	Poecilia_reticulata
ENSCING00000000293	-	71	69.957	ENSPREG00000007592	cnot3a	82	69.957	Poecilia_reticulata
ENSCING00000000293	-	77	88.034	ENSPCAG00000011999	CNOT3	77	88.034	Procavia_capensis
ENSCING00000000293	-	68	65.289	ENSPNYG00000003358	cnot3b	51	65.289	Pundamilia_nyererei
ENSCING00000000293	-	71	67.769	ENSPNYG00000002282	cnot3a	57	67.769	Pundamilia_nyererei
ENSCING00000000293	-	72	68.182	ENSPNAG00000017679	cnot3a	78	53.125	Pygocentrus_nattereri
ENSCING00000000293	-	71	66.529	ENSPNAG00000027459	cnot3b	74	57.093	Pygocentrus_nattereri
ENSCING00000000293	-	83	68.103	ENSSBOG00000030268	CNOT3	100	50.391	Saimiri_boliviensis_boliviensis
ENSCING00000000293	-	68	67.355	ENSSFOG00015019203	-	64	57.100	Scleropages_formosus
ENSCING00000000293	-	59	81.707	ENSSFOG00015000248	cnot3	67	81.707	Scleropages_formosus
ENSCING00000000293	-	71	66.529	ENSSMAG00000016031	cnot3b	80	57.877	Scophthalmus_maximus
ENSCING00000000293	-	72	67.213	ENSSMAG00000013235	cnot3a	77	57.651	Scophthalmus_maximus
ENSCING00000000293	-	68	67.355	ENSSDUG00000003428	cnot3b	87	58.947	Seriola_dumerili
ENSCING00000000293	-	72	67.886	ENSSDUG00000008181	cnot3a	100	67.078	Seriola_dumerili
ENSCING00000000293	-	68	67.355	ENSSLDG00000014376	cnot3b	87	58.947	Seriola_lalandi_dorsalis
ENSCING00000000293	-	68	67.623	ENSSLDG00000014733	cnot3a	75	52.209	Seriola_lalandi_dorsalis
ENSCING00000000293	-	100	50.734	ENSSPUG00000008510	CNOT3	100	49.935	Sphenodon_punctatus
ENSCING00000000293	-	70	68.670	ENSSPAG00000001429	cnot3b	64	57.862	Stegastes_partitus
ENSCING00000000293	-	71	67.213	ENSSPAG00000003858	cnot3a	60	67.355	Stegastes_partitus
ENSCING00000000293	-	68	68.240	ENSSSCG00000003264	CNOT3	100	49.054	Sus_scrofa
ENSCING00000000293	-	59	80.488	ENSTRUG00000007248	cnot3b	57	80.488	Takifugu_rubripes
ENSCING00000000293	-	72	68.033	ENSTRUG00000015732	cnot3a	72	58.176	Takifugu_rubripes
ENSCING00000000293	-	64	67.769	ENSTNIG00000005663	cnot3b	78	50.117	Tetraodon_nigroviridis
ENSCING00000000293	-	63	68.182	ENSTNIG00000008082	cnot3a	60	59.740	Tetraodon_nigroviridis
ENSCING00000000293	-	71	69.528	ENSUMAG00000010934	CNOT3	82	68.201	Ursus_maritimus
ENSCING00000000293	-	51	76.699	ENSVPAG00000001320	-	50	76.699	Vicugna_pacos
ENSCING00000000293	-	72	67.490	ENSXETG00000003166	cnot3	100	50.593	Xenopus_tropicalis
ENSCING00000000293	-	69	69.957	ENSXCOG00000019460	cnot3a	91	69.957	Xiphophorus_couchianus
ENSCING00000000293	-	66	70.721	ENSXCOG00000018976	cnot3b	78	55.823	Xiphophorus_couchianus
ENSCING00000000293	-	71	70.721	ENSXMAG00000014176	cnot3b	81	56.825	Xiphophorus_maculatus
ENSCING00000000293	-	71	68.595	ENSXMAG00000012273	cnot3a	64	57.547	Xiphophorus_maculatus