EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000000308 (Gene tree)
Gene ID: 100187540
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 4E type 3
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3454 bases
Position: chrHT000542.1:88961-92414
Accession: 100187540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000000571	IF4E	PF01652.18	7.3e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000000571	-	732	XM_002122705	ENSCINP00000000571	235 (aa)	XP_002122741	F6ZFY8

Gene Model

Click here to download ENSCING00000000308's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG
cin04150	mTOR signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000000308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000000308	-	82	54.404	ENSG00000163412	EIF4E3	100	56.818	Homo_sapiens
ENSCING00000000308	-	76	51.955	ENSAPOG00000014276	EIF4E3	79	51.955	Acanthochromis_polyacanthus
ENSCING00000000308	-	74	53.714	ENSAPOG00000016094	eif4e3	96	47.867	Acanthochromis_polyacanthus
ENSCING00000000308	-	69	54.878	ENSAMEG00000015115	EIF4E3	97	54.878	Ailuropoda_melanoleuca
ENSCING00000000308	-	74	52.023	ENSACIG00000021312	-	76	52.023	Amphilophus_citrinellus
ENSCING00000000308	-	78	52.128	ENSACIG00000000059	eif4e3	86	52.128	Amphilophus_citrinellus
ENSCING00000000308	-	76	53.073	ENSAOCG00000022785	eif4e3	96	48.341	Amphiprion_ocellaris
ENSCING00000000308	-	76	51.955	ENSAOCG00000024717	-	79	51.955	Amphiprion_ocellaris
ENSCING00000000308	-	75	53.672	ENSAPEG00000018566	EIF4E3	95	48.804	Amphiprion_percula
ENSCING00000000308	-	76	51.955	ENSAPEG00000021766	-	79	51.955	Amphiprion_percula
ENSCING00000000308	-	76	51.397	ENSATEG00000008530	EIF4E3	79	51.397	Anabas_testudineus
ENSCING00000000308	-	89	47.143	ENSATEG00000020241	eif4e3	96	47.143	Anabas_testudineus
ENSCING00000000308	-	77	54.696	ENSACAG00000013899	EIF4E3	82	54.696	Anolis_carolinensis
ENSCING00000000308	-	76	56.425	ENSANAG00000031727	EIF4E3	94	54.124	Aotus_nancymaae
ENSCING00000000308	-	74	53.179	ENSACLG00000022985	EIF4E3	76	53.179	Astatotilapia_calliptera
ENSCING00000000308	-	81	51.295	ENSAMXG00000036675	eif4e3	86	51.295	Astyanax_mexicanus
ENSCING00000000308	-	76	55.866	ENSBTAG00000018862	EIF4E3	90	50.971	Bos_taurus
ENSCING00000000308	-	82	54.404	ENSCJAG00000044237	EIF4E3	94	50.926	Callithrix_jacchus
ENSCING00000000308	-	72	54.438	ENSCAFG00000006445	EIF4E3	74	54.938	Canis_familiaris
ENSCING00000000308	-	76	55.866	ENSCHIG00000024333	EIF4E3	87	53.093	Capra_hircus
ENSCING00000000308	-	69	42.593	ENSCAPG00000013651	EIF4E3	98	42.593	Cavia_aperea
ENSCING00000000308	-	80	55.080	ENSCPOG00000000391	EIF4E3	94	53.266	Cavia_porcellus
ENSCING00000000308	-	82	53.886	ENSCCAG00000002248	EIF4E3	87	53.886	Cebus_capucinus
ENSCING00000000308	-	89	50.952	ENSCATG00000042150	-	96	54.867	Cercocebus_atys
ENSCING00000000308	-	74	49.143	ENSCATG00000031817	-	97	45.813	Cercocebus_atys
ENSCING00000000308	-	69	54.601	ENSCLAG00000003818	EIF4E3	96	53.982	Chinchilla_lanigera
ENSCING00000000308	-	82	53.886	ENSCSAG00000011556	-	94	50.000	Chlorocebus_sabaeus
ENSCING00000000308	-	69	54.321	ENSCHOG00000009047	EIF4E3	98	54.321	Choloepus_hoffmanni
ENSCING00000000308	-	76	54.749	ENSCPBG00000006415	EIF4E3	81	54.749	Chrysemys_picta_bellii
ENSCING00000000308	-	99	85.837	ENSCSAVG00000001252	-	100	85.837	Ciona_savignyi
ENSCING00000000308	-	83	51.031	ENSCANG00000034117	-	84	51.031	Colobus_angolensis_palliatus
ENSCING00000000308	-	76	56.425	ENSCGRG00001016500	Eif4e3	86	56.425	Cricetulus_griseus_chok1gshd
ENSCING00000000308	-	68	55.625	ENSCGRG00000007847	Eif4e3	87	55.625	Cricetulus_griseus_crigri
ENSCING00000000308	-	87	48.077	ENSCSEG00000007779	-	92	48.077	Cynoglossus_semilaevis
ENSCING00000000308	-	78	52.717	ENSCSEG00000018457	eif4e3	84	52.717	Cynoglossus_semilaevis
ENSCING00000000308	-	87	46.890	ENSCVAG00000020000	-	92	46.890	Cyprinodon_variegatus
ENSCING00000000308	-	51	49.580	ENSCVAG00000023205	eif4e3	73	49.580	Cyprinodon_variegatus
ENSCING00000000308	-	88	50.481	ENSDARG00000005078	eif4e3	92	50.481	Danio_rerio
ENSCING00000000308	-	71	54.491	ENSDNOG00000039475	EIF4E3	62	54.491	Dasypus_novemcinctus
ENSCING00000000308	-	69	53.704	ENSDORG00000006531	Eif4e3	98	53.704	Dipodomys_ordii
ENSCING00000000308	-	77	52.222	ENSEBUG00000005603	eif4e3	69	52.222	Eptatretus_burgeri
ENSCING00000000308	-	82	54.404	ENSEASG00005002204	EIF4E3	86	54.124	Equus_asinus_asinus
ENSCING00000000308	-	76	56.425	ENSECAG00000004471	EIF4E3	87	54.124	Equus_caballus
ENSCING00000000308	-	57	54.815	ENSEEUG00000008916	EIF4E3	96	54.815	Erinaceus_europaeus
ENSCING00000000308	-	81	50.000	ENSELUG00000019727	eif4e3	76	50.000	Esox_lucius
ENSCING00000000308	-	85	49.275	ENSELUG00000003543	-	95	49.275	Esox_lucius
ENSCING00000000308	-	76	55.866	ENSFCAG00000025548	EIF4E3	96	54.867	Felis_catus
ENSCING00000000308	-	86	50.495	ENSFALG00000013420	EIF4E3	94	50.495	Ficedula_albicollis
ENSCING00000000308	-	72	52.353	ENSFDAG00000006089	EIF4E3	94	52.353	Fukomys_damarensis
ENSCING00000000308	-	87	46.667	ENSFHEG00000017632	-	92	46.667	Fundulus_heteroclitus
ENSCING00000000308	-	78	53.261	ENSFHEG00000008279	eif4e3	86	53.261	Fundulus_heteroclitus
ENSCING00000000308	-	74	53.143	ENSGMOG00000007389	-	85	53.143	Gadus_morhua
ENSCING00000000308	-	78	51.087	ENSGMOG00000010140	eif4e3	85	51.087	Gadus_morhua
ENSCING00000000308	-	84	50.505	ENSGALG00000007780	EIF4E3	98	50.505	Gallus_gallus
ENSCING00000000308	-	83	50.515	ENSGAFG00000004090	eif4e3	90	50.515	Gambusia_affinis
ENSCING00000000308	-	80	49.223	ENSGAFG00000009003	EIF4E3	85	49.223	Gambusia_affinis
ENSCING00000000308	-	87	47.059	ENSGACG00000011825	-	94	47.059	Gasterosteus_aculeatus
ENSCING00000000308	-	77	50.829	ENSGACG00000003392	eif4e3	85	50.829	Gasterosteus_aculeatus
ENSCING00000000308	-	76	54.190	ENSGAGG00000022510	EIF4E3	81	54.190	Gopherus_agassizii
ENSCING00000000308	-	74	53.179	ENSHBUG00000010777	EIF4E3	76	53.179	Haplochromis_burtoni
ENSCING00000000308	-	74	53.714	ENSHBUG00000007849	eif4e3	85	51.872	Haplochromis_burtoni
ENSCING00000000308	-	76	55.307	ENSHGLG00000019560	EIF4E3	96	53.097	Heterocephalus_glaber_female
ENSCING00000000308	-	80	40.426	ENSHCOG00000012145	eif4e3	84	40.426	Hippocampus_comes
ENSCING00000000308	-	77	47.222	ENSHCOG00000010757	EIF4E3	79	47.222	Hippocampus_comes
ENSCING00000000308	-	88	50.000	ENSIPUG00000007049	eif4e3	92	50.000	Ictalurus_punctatus
ENSCING00000000308	-	69	54.658	ENSJJAG00000002638	Eif4e3	86	54.658	Jaculus_jaculus
ENSCING00000000308	-	77	52.778	ENSKMAG00000004316	EIF4E3	78	52.778	Kryptolebias_marmoratus
ENSCING00000000308	-	85	49.038	ENSKMAG00000010167	eif4e3	96	49.038	Kryptolebias_marmoratus
ENSCING00000000308	-	77	51.934	ENSLBEG00000008251	eif4e3	83	51.934	Labrus_bergylta
ENSCING00000000308	-	92	43.779	ENSLACG00000005925	EIF4E3	96	43.779	Latimeria_chalumnae
ENSCING00000000308	-	77	54.144	ENSLOCG00000010001	eif4e3	81	54.144	Lepisosteus_oculatus
ENSCING00000000308	-	69	55.215	ENSLAFG00000001998	EIF4E3	96	55.215	Loxodonta_africana
ENSCING00000000308	-	74	42.857	ENSMFAG00000044935	-	82	42.857	Macaca_fascicularis
ENSCING00000000308	-	82	53.886	ENSMNEG00000035212	-	96	54.867	Macaca_nemestrina
ENSCING00000000308	-	74	47.778	ENSMNEG00000043302	-	85	47.802	Macaca_nemestrina
ENSCING00000000308	-	74	48.864	ENSMLEG00000035876	-	82	48.864	Mandrillus_leucophaeus
ENSCING00000000308	-	75	53.107	ENSMAMG00000023426	EIF4E3	78	53.107	Mastacembelus_armatus
ENSCING00000000308	-	89	46.190	ENSMAMG00000024180	EIF4E3	80	46.190	Mastacembelus_armatus
ENSCING00000000308	-	74	53.714	ENSMZEG00005026251	eif4e3	85	51.872	Maylandia_zebra
ENSCING00000000308	-	74	53.179	ENSMZEG00005008767	EIF4E3	76	53.179	Maylandia_zebra
ENSCING00000000308	-	69	53.374	ENSMGAG00000009619	EIF4E3	98	53.374	Meleagris_gallopavo
ENSCING00000000308	-	76	55.866	ENSMAUG00000019824	Eif4e3	95	52.736	Mesocricetus_auratus
ENSCING00000000308	-	69	54.938	ENSMICG00000001125	EIF4E3	86	54.938	Microcebus_murinus
ENSCING00000000308	-	76	55.866	ENSMOCG00000020297	Eif4e3	86	55.866	Microtus_ochrogaster
ENSCING00000000308	-	69	51.553	ENSMMOG00000010583	EIF4E3	90	51.553	Mola_mola
ENSCING00000000308	-	79	50.538	ENSMMOG00000011660	eif4e3	85	50.538	Mola_mola
ENSCING00000000308	-	80	55.556	ENSMODG00000003899	EIF4E3	83	55.556	Monodelphis_domestica
ENSCING00000000308	-	74	53.143	ENSMALG00000010770	eif4e3	80	53.143	Monopterus_albus
ENSCING00000000308	-	76	51.397	ENSMALG00000008769	EIF4E3	79	51.397	Monopterus_albus
ENSCING00000000308	-	80	55.319	MGP_CAROLIEiJ_G0028685	Eif4e3	90	55.319	Mus_caroli
ENSCING00000000308	-	80	55.851	ENSMUSG00000093661	Eif4e3	90	55.851	Mus_musculus
ENSCING00000000308	-	80	55.851	MGP_PahariEiJ_G0022436	Eif4e3	90	55.851	Mus_pahari
ENSCING00000000308	-	80	55.851	MGP_SPRETEiJ_G0029713	Eif4e3	90	55.851	Mus_spretus
ENSCING00000000308	-	69	54.938	ENSMPUG00000017002	EIF4E3	60	54.938	Mustela_putorius_furo
ENSCING00000000308	-	76	54.144	ENSMLUG00000004758	EIF4E3	97	54.144	Myotis_lucifugus
ENSCING00000000308	-	76	55.866	ENSNGAG00000000837	Eif4e3	86	55.866	Nannospalax_galili
ENSCING00000000308	-	74	53.714	ENSNBRG00000012239	eif4e3	85	51.872	Neolamprologus_brichardi
ENSCING00000000308	-	74	53.179	ENSNBRG00000023984	EIF4E3	76	53.179	Neolamprologus_brichardi
ENSCING00000000308	-	68	56.875	ENSOPRG00000014732	EIF4E3	97	56.875	Ochotona_princeps
ENSCING00000000308	-	80	54.011	ENSODEG00000006191	EIF4E3	94	52.000	Octodon_degus
ENSCING00000000308	-	74	53.714	ENSONIG00000016959	eif4e3	85	51.872	Oreochromis_niloticus
ENSCING00000000308	-	74	53.179	ENSONIG00000020266	EIF4E3	76	53.179	Oreochromis_niloticus
ENSCING00000000308	-	69	53.988	ENSOANG00000013094	EIF4E3	96	53.988	Ornithorhynchus_anatinus
ENSCING00000000308	-	69	55.901	ENSOCUG00000000259	EIF4E3	97	55.901	Oryctolagus_cuniculus
ENSCING00000000308	-	76	50.838	ENSORLG00000010970	-	79	50.838	Oryzias_latipes
ENSCING00000000308	-	80	51.042	ENSORLG00000013391	EIF4E3	89	52.174	Oryzias_latipes
ENSCING00000000308	-	76	50.838	ENSORLG00020003751	-	79	50.838	Oryzias_latipes_hni
ENSCING00000000308	-	80	51.562	ENSORLG00020015316	EIF4E3	89	51.562	Oryzias_latipes_hni
ENSCING00000000308	-	80	51.042	ENSORLG00015009312	EIF4E3	92	51.042	Oryzias_latipes_hsok
ENSCING00000000308	-	77	50.276	ENSORLG00015021121	-	80	50.276	Oryzias_latipes_hsok
ENSCING00000000308	-	77	50.276	ENSOMEG00000001240	-	80	50.276	Oryzias_melastigma
ENSCING00000000308	-	80	50.521	ENSOMEG00000004650	eif4e3	92	50.521	Oryzias_melastigma
ENSCING00000000308	-	69	54.938	ENSOGAG00000014590	EIF4E3	98	54.938	Otolemur_garnettii
ENSCING00000000308	-	68	54.658	ENSOARG00000009622	EIF4E3	97	54.658	Ovis_aries
ENSCING00000000308	-	71	52.695	ENSPPAG00000035020	-	89	52.410	Pan_paniscus
ENSCING00000000308	-	81	54.450	ENSPPRG00000004898	EIF4E3	96	54.867	Panthera_pardus
ENSCING00000000308	-	82	54.404	ENSPTRG00000015102	EIF4E3	94	50.463	Pan_troglodytes
ENSCING00000000308	-	82	53.886	ENSPANG00000024441	-	94	50.000	Papio_anubis
ENSCING00000000308	-	79	55.376	ENSPKIG00000024547	eif4e3	83	55.376	Paramormyrops_kingsleyae
ENSCING00000000308	-	78	53.804	ENSPKIG00000021599	-	86	53.804	Paramormyrops_kingsleyae
ENSCING00000000308	-	75	51.977	ENSPMGG00000008853	EIF4E3	78	51.977	Periophthalmus_magnuspinnatus
ENSCING00000000308	-	74	54.913	ENSPMGG00000009868	eif4e3	80	54.913	Periophthalmus_magnuspinnatus
ENSCING00000000308	-	75	55.682	ENSPEMG00000015380	Eif4e3	85	55.682	Peromyscus_maniculatus_bairdii
ENSCING00000000308	-	76	56.983	ENSPCIG00000011825	EIF4E3	89	53.807	Phascolarctos_cinereus
ENSCING00000000308	-	78	51.337	ENSPFOG00000007551	eif4e3	85	51.337	Poecilia_formosa
ENSCING00000000308	-	80	48.187	ENSPFOG00000001273	-	85	48.187	Poecilia_formosa
ENSCING00000000308	-	65	49.045	ENSPLAG00000005792	-	76	49.045	Poecilia_latipinna
ENSCING00000000308	-	78	52.174	ENSPLAG00000008729	eif4e3	85	52.174	Poecilia_latipinna
ENSCING00000000308	-	78	52.174	ENSPMEG00000009131	eif4e3	85	52.174	Poecilia_mexicana
ENSCING00000000308	-	80	48.187	ENSPMEG00000013473	-	85	48.187	Poecilia_mexicana
ENSCING00000000308	-	74	51.445	ENSPREG00000004801	EIF4E3	74	51.445	Poecilia_reticulata
ENSCING00000000308	-	80	48.187	ENSPREG00000000653	EIF4E3	85	48.187	Poecilia_reticulata
ENSCING00000000308	-	69	54.321	ENSPPYG00000013721	-	98	54.321	Pongo_abelii
ENSCING00000000308	-	64	54.667	ENSPCAG00000002861	EIF4E3	100	54.667	Procavia_capensis
ENSCING00000000308	-	64	54.667	ENSPVAG00000005661	EIF4E3	100	54.667	Pteropus_vampyrus
ENSCING00000000308	-	74	53.714	ENSPNYG00000017704	eif4e3	85	51.872	Pundamilia_nyererei
ENSCING00000000308	-	74	53.179	ENSPNYG00000003711	-	76	53.179	Pundamilia_nyererei
ENSCING00000000308	-	75	54.237	ENSPNAG00000029186	eif4e3	79	54.237	Pygocentrus_nattereri
ENSCING00000000308	-	80	54.787	ENSRNOG00000010301	Eif4e3	90	54.787	Rattus_norvegicus
ENSCING00000000308	-	70	55.152	ENSRBIG00000028060	EIF4E3	84	55.828	Rhinopithecus_bieti
ENSCING00000000308	-	69	56.522	ENSSHAG00000008775	EIF4E3	97	56.522	Sarcophilus_harrisii
ENSCING00000000308	-	75	55.932	ENSSFOG00015016279	eif4e3	90	50.490	Scleropages_formosus
ENSCING00000000308	-	78	53.804	ENSSFOG00015020539	eif4e3	82	53.804	Scleropages_formosus
ENSCING00000000308	-	83	47.692	ENSSMAG00000006112	eif4e3	73	47.692	Scophthalmus_maximus
ENSCING00000000308	-	69	50.932	ENSSMAG00000016095	EIF4E3	74	50.932	Scophthalmus_maximus
ENSCING00000000308	-	76	51.955	ENSSDUG00000012045	EIF4E3	79	51.955	Seriola_dumerili
ENSCING00000000308	-	81	50.785	ENSSDUG00000020316	eif4e3	85	50.785	Seriola_dumerili
ENSCING00000000308	-	76	51.955	ENSSLDG00000013831	EIF4E3	79	51.955	Seriola_lalandi_dorsalis
ENSCING00000000308	-	81	50.785	ENSSLDG00000007755	eif4e3	85	50.785	Seriola_lalandi_dorsalis
ENSCING00000000308	-	53	47.200	ENSSARG00000008020	-	99	47.200	Sorex_araneus
ENSCING00000000308	-	86	50.495	ENSSPUG00000011580	EIF4E3	88	49.268	Sphenodon_punctatus
ENSCING00000000308	-	76	51.955	ENSSPAG00000021234	EIF4E3	79	51.955	Stegastes_partitus
ENSCING00000000308	-	79	53.226	ENSSPAG00000019336	eif4e3	96	48.815	Stegastes_partitus
ENSCING00000000308	-	76	55.866	ENSSSCG00000011516	EIF4E3	96	53.982	Sus_scrofa
ENSCING00000000308	-	74	55.491	ENSTGUG00000009923	EIF4E3	100	55.491	Taeniopygia_guttata
ENSCING00000000308	-	89	47.596	ENSTRUG00000020181	eif4e3	97	47.596	Takifugu_rubripes
ENSCING00000000308	-	77	50.276	ENSTRUG00000022670	-	79	50.276	Takifugu_rubripes
ENSCING00000000308	-	76	51.397	ENSTNIG00000007358	-	78	51.397	Tetraodon_nigroviridis
ENSCING00000000308	-	89	47.596	ENSTNIG00000012566	eif4e3	95	47.596	Tetraodon_nigroviridis
ENSCING00000000308	-	69	47.531	ENSTTRG00000005076	EIF4E3	98	47.531	Tursiops_truncatus
ENSCING00000000308	-	69	55.280	ENSXETG00000015908	eif4e3	97	55.280	Xenopus_tropicalis
ENSCING00000000308	-	69	51.553	ENSXCOG00000010474	EIF4E3	70	51.553	Xiphophorus_couchianus
ENSCING00000000308	-	80	48.705	ENSXMAG00000002188	EIF4E3	85	48.705	Xiphophorus_maculatus
ENSCING00000000308	-	78	52.174	ENSXMAG00000024672	eif4e3	85	52.174	Xiphophorus_maculatus