EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000000345 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4043 bases
Position: chrHT000161.1:34971-39013
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000000632	RRM_1	PF00076.22	1.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000000632	-	1432	-	ENSCINP00000000632	258 (aa)	-	F6WDS6

Gene Model

Click here to download ENSCING00000000345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000000345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000000345	-	53	64.493	ENSG00000125944	HNRNPR	92	39.597	Homo_sapiens
ENSCING00000000345	-	53	62.319	ENSG00000135316	SYNCRIP	50	47.521	Homo_sapiens
ENSCING00000000345	-	53	65.217	ENSDARG00000014569	hnrnpr	87	65.217	Danio_rerio
ENSCING00000000345	-	53	62.319	ENSDARG00000040184	syncrip	66	44.099	Danio_rerio
ENSCING00000000345	-	56	42.282	ENSDNOG00000031176	-	52	37.500	Dasypus_novemcinctus
ENSCING00000000345	-	53	62.319	ENSMMUG00000012575	SYNCRIP	50	47.521	Macaca_mulatta
ENSCING00000000345	-	53	62.319	ENSMUSG00000032423	Syncrip	50	47.521	Mus_musculus
ENSCING00000000345	-	53	42.953	MGP_PahariEiJ_G0015376	Syncrip	61	36.759	Mus_pahari
ENSCING00000000345	-	53	62.319	ENSSSCG00000004294	-	50	47.521	Sus_scrofa