EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000000524 (Gene tree)
Gene ID: 100178170
Gene Symbol: -
Alias: -
Full Name: staphylococcal nuclease domain-containing protein 1
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 28603 bases
Position: chrHT000077.1:67919-96521
Accession: 100178170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000027118	TUDOR	PF00567.24	1.9e-25	1	1
ENSCINP00000027118	SNase	PF00565.17	6e-61	1	4
ENSCINP00000027118	SNase	PF00565.17	6e-61	2	4
ENSCINP00000027118	SNase	PF00565.17	6e-61	3	4
ENSCINP00000027118	SNase	PF00565.17	6e-61	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000027364	-	2971	XM_002128366	ENSCINP00000027118	919 (aa)	XP_002128402	F6VCH9

Gene Model

Click here to download ENSCING00000000524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000000524's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000000524	-	98	56.921	ENSG00000197157	SND1	98	56.921	Homo_sapiens
ENSCING00000000524	-	99	56.100	ENSAPOG00000017599	snd1	98	56.700	Acanthochromis_polyacanthus
ENSCING00000000524	-	99	56.277	ENSAMEG00000004664	SND1	92	56.954	Ailuropoda_melanoleuca
ENSCING00000000524	-	98	55.150	ENSACIG00000003551	snd1	98	55.150	Amphilophus_citrinellus
ENSCING00000000524	-	99	55.991	ENSAOCG00000014166	snd1	98	56.700	Amphiprion_ocellaris
ENSCING00000000524	-	99	56.100	ENSAPEG00000007067	snd1	98	56.700	Amphiprion_percula
ENSCING00000000524	-	98	55.801	ENSATEG00000018475	snd1	87	56.321	Anabas_testudineus
ENSCING00000000524	-	98	57.032	ENSANAG00000034463	SND1	100	55.902	Aotus_nancymaae
ENSCING00000000524	-	99	56.895	ENSACLG00000022897	snd1	98	57.475	Astatotilapia_calliptera
ENSCING00000000524	-	99	56.135	ENSAMXG00000016318	snd1	98	56.670	Astyanax_mexicanus
ENSCING00000000524	-	98	57.364	ENSBTAG00000010692	SND1	98	57.364	Bos_taurus
ENSCING00000000524	-	98	44.731	WBGene00006626	tsn-1	97	44.989	Caenorhabditis_elegans
ENSCING00000000524	-	98	57.032	ENSCJAG00000017668	SND1	99	56.745	Callithrix_jacchus
ENSCING00000000524	-	99	55.917	ENSCAFG00000001700	SND1	98	57.032	Canis_familiaris
ENSCING00000000524	-	99	55.917	ENSCAFG00020021639	SND1	98	57.032	Canis_lupus_dingo
ENSCING00000000524	-	98	57.254	ENSCHIG00000023390	SND1	99	56.575	Capra_hircus
ENSCING00000000524	-	71	61.379	ENSTSYG00000004979	SND1	96	61.379	Carlito_syrichta
ENSCING00000000524	-	97	51.276	ENSCAPG00000010677	SND1	97	51.050	Cavia_aperea
ENSCING00000000524	-	98	57.032	ENSCPOG00000006251	SND1	98	57.032	Cavia_porcellus
ENSCING00000000524	-	98	57.143	ENSCCAG00000036847	SND1	100	56.013	Cebus_capucinus
ENSCING00000000524	-	98	57.143	ENSCATG00000035214	SND1	99	56.856	Cercocebus_atys
ENSCING00000000524	-	98	56.700	ENSCLAG00000011796	SND1	94	61.604	Chinchilla_lanigera
ENSCING00000000524	-	98	57.143	ENSCSAG00000010182	SND1	98	57.143	Chlorocebus_sabaeus
ENSCING00000000524	-	78	49.515	ENSCHOG00000002218	SND1	86	49.515	Choloepus_hoffmanni
ENSCING00000000524	-	99	56.312	ENSCPBG00000018094	SND1	98	57.032	Chrysemys_picta_bellii
ENSCING00000000524	-	99	84.113	ENSCSAVG00000008807	-	98	84.956	Ciona_savignyi
ENSCING00000000524	-	98	57.143	ENSCANG00000035119	SND1	98	57.143	Colobus_angolensis_palliatus
ENSCING00000000524	-	98	56.748	ENSCGRG00001022514	Snd1	95	61.670	Cricetulus_griseus_chok1gshd
ENSCING00000000524	-	97	56.459	ENSCGRG00000012277	Snd1	99	56.459	Cricetulus_griseus_crigri
ENSCING00000000524	-	99	55.799	ENSCSEG00000008661	snd1	98	56.305	Cynoglossus_semilaevis
ENSCING00000000524	-	99	55.641	ENSCVAG00000010316	snd1	100	54.938	Cyprinodon_variegatus
ENSCING00000000524	-	99	56.911	ENSDARG00000006766	snd1	95	61.400	Danio_rerio
ENSCING00000000524	-	97	55.444	ENSDNOG00000006795	SND1	100	55.444	Dasypus_novemcinctus
ENSCING00000000524	-	98	57.143	ENSDORG00000000336	Snd1	98	57.143	Dipodomys_ordii
ENSCING00000000524	-	99	46.063	FBgn0035121	Tudor-SN	98	46.471	Drosophila_melanogaster
ENSCING00000000524	-	90	55.556	ENSETEG00000000375	SND1	92	55.556	Echinops_telfairi
ENSCING00000000524	-	98	56.970	ENSEASG00005008513	SND1	98	56.970	Equus_asinus_asinus
ENSCING00000000524	-	98	57.206	ENSECAG00000011451	SND1	98	57.206	Equus_caballus
ENSCING00000000524	-	99	50.774	ENSEEUG00000014737	SND1	98	51.217	Erinaceus_europaeus
ENSCING00000000524	-	99	56.013	ENSELUG00000001805	snd1	95	56.954	Esox_lucius
ENSCING00000000524	-	99	56.460	ENSFCAG00000008289	SND1	98	57.143	Felis_catus
ENSCING00000000524	-	98	56.700	ENSFDAG00000015881	SND1	98	56.700	Fukomys_damarensis
ENSCING00000000524	-	99	54.828	ENSFHEG00000004093	snd1	97	56.863	Fundulus_heteroclitus
ENSCING00000000524	-	63	46.218	ENSGMOG00000018932	snd1	64	46.218	Gadus_morhua
ENSCING00000000524	-	99	55.700	ENSGAFG00000008421	snd1	99	56.013	Gambusia_affinis
ENSCING00000000524	-	99	35.193	ENSGACG00000019793	snd1	98	35.892	Gasterosteus_aculeatus
ENSCING00000000524	-	98	57.143	ENSGGOG00000009614	SND1	99	56.856	Gorilla_gorilla
ENSCING00000000524	-	99	57.158	ENSHBUG00000019135	snd1	98	57.475	Haplochromis_burtoni
ENSCING00000000524	-	98	56.811	ENSHGLG00000003618	SND1	94	61.604	Heterocephalus_glaber_female
ENSCING00000000524	-	99	56.346	ENSHGLG00100012449	SND1	98	56.811	Heterocephalus_glaber_male
ENSCING00000000524	-	98	56.257	ENSHCOG00000005266	snd1	98	56.257	Hippocampus_comes
ENSCING00000000524	-	99	55.124	ENSIPUG00000013279	snd1	98	55.788	Ictalurus_punctatus
ENSCING00000000524	-	98	56.921	ENSSTOG00000002140	SND1	98	56.921	Ictidomys_tridecemlineatus
ENSCING00000000524	-	98	57.143	ENSJJAG00000009561	Snd1	98	57.143	Jaculus_jaculus
ENSCING00000000524	-	99	56.100	ENSKMAG00000016997	snd1	98	56.921	Kryptolebias_marmoratus
ENSCING00000000524	-	99	55.375	ENSLBEG00000013563	snd1	98	56.146	Labrus_bergylta
ENSCING00000000524	-	98	55.458	ENSLOCG00000015537	snd1	98	55.458	Lepisosteus_oculatus
ENSCING00000000524	-	98	57.364	ENSLAFG00000009696	SND1	98	57.364	Loxodonta_africana
ENSCING00000000524	-	98	57.143	ENSMFAG00000038114	SND1	99	56.856	Macaca_fascicularis
ENSCING00000000524	-	98	57.143	ENSMMUG00000015432	SND1	93	62.176	Macaca_mulatta
ENSCING00000000524	-	98	57.143	ENSMNEG00000039808	SND1	96	61.780	Macaca_nemestrina
ENSCING00000000524	-	98	57.032	ENSMLEG00000029040	SND1	96	61.780	Mandrillus_leucophaeus
ENSCING00000000524	-	98	56.589	ENSMAMG00000011739	snd1	98	56.589	Mastacembelus_armatus
ENSCING00000000524	-	99	56.895	ENSMZEG00005005681	snd1	98	57.475	Maylandia_zebra
ENSCING00000000524	-	98	57.143	ENSMICG00000000097	SND1	98	57.143	Microcebus_murinus
ENSCING00000000524	-	98	57.301	ENSMOCG00000005040	Snd1	98	57.301	Microtus_ochrogaster
ENSCING00000000524	-	99	55.917	ENSMMOG00000001795	snd1	98	56.589	Mola_mola
ENSCING00000000524	-	98	57.522	ENSMODG00000015182	SND1	98	57.522	Monodelphis_domestica
ENSCING00000000524	-	99	56.379	ENSMALG00000012071	snd1	98	56.921	Monopterus_albus
ENSCING00000000524	-	98	57.190	MGP_CAROLIEiJ_G0028159	Snd1	96	62.116	Mus_caroli
ENSCING00000000524	-	98	57.301	ENSMUSG00000001424	Snd1	96	62.181	Mus_musculus
ENSCING00000000524	-	98	57.190	MGP_PahariEiJ_G0021917	Snd1	97	62.116	Mus_pahari
ENSCING00000000524	-	98	57.190	MGP_SPRETEiJ_G0029159	Snd1	96	62.010	Mus_spretus
ENSCING00000000524	-	98	57.095	ENSMPUG00000006545	SND1	98	57.095	Mustela_putorius_furo
ENSCING00000000524	-	97	56.057	ENSMLUG00000017130	SND1	99	56.057	Myotis_lucifugus
ENSCING00000000524	-	98	56.858	ENSNGAG00000011186	Snd1	98	56.858	Nannospalax_galili
ENSCING00000000524	-	99	57.003	ENSNBRG00000006681	snd1	98	57.586	Neolamprologus_brichardi
ENSCING00000000524	-	98	57.143	ENSNLEG00000012263	SND1	96	61.880	Nomascus_leucogenys
ENSCING00000000524	-	90	55.556	ENSOPRG00000013405	SND1	90	55.556	Ochotona_princeps
ENSCING00000000524	-	98	56.969	ENSODEG00000011502	SND1	98	56.969	Octodon_degus
ENSCING00000000524	-	99	56.786	ENSONIG00000011481	snd1	95	57.364	Oreochromis_niloticus
ENSCING00000000524	-	97	56.430	ENSOANG00000000817	SND1	98	56.874	Ornithorhynchus_anatinus
ENSCING00000000524	-	98	57.254	ENSOCUG00000001620	SND1	98	57.254	Oryctolagus_cuniculus
ENSCING00000000524	-	98	56.146	ENSORLG00000015201	snd1	98	56.146	Oryzias_latipes
ENSCING00000000524	-	98	56.368	ENSORLG00020013991	snd1	98	56.368	Oryzias_latipes_hni
ENSCING00000000524	-	98	56.257	ENSORLG00015012436	snd1	98	56.257	Oryzias_latipes_hsok
ENSCING00000000524	-	98	56.811	ENSOMEG00000006406	snd1	98	56.811	Oryzias_melastigma
ENSCING00000000524	-	98	56.796	ENSOGAG00000013356	SND1	92	56.796	Otolemur_garnettii
ENSCING00000000524	-	97	55.345	ENSOARG00000002149	SND1	100	55.345	Ovis_aries
ENSCING00000000524	-	98	57.032	ENSPPAG00000042947	SND1	99	56.745	Pan_paniscus
ENSCING00000000524	-	99	56.460	ENSPPRG00000004494	SND1	98	57.143	Panthera_pardus
ENSCING00000000524	-	99	56.352	ENSPTIG00000014214	SND1	98	57.032	Panthera_tigris_altaica
ENSCING00000000524	-	98	57.032	ENSPTRG00000023911	SND1	99	56.745	Pan_troglodytes
ENSCING00000000524	-	97	56.856	ENSPANG00000011997	SND1	99	56.856	Papio_anubis
ENSCING00000000524	-	99	55.556	ENSPKIG00000023494	snd1	98	55.837	Paramormyrops_kingsleyae
ENSCING00000000524	-	92	56.080	ENSPMGG00000003629	snd1	100	56.080	Periophthalmus_magnuspinnatus
ENSCING00000000524	-	98	57.190	ENSPEMG00000010240	Snd1	98	57.190	Peromyscus_maniculatus_bairdii
ENSCING00000000524	-	99	54.404	ENSPMAG00000007915	-	99	54.404	Petromyzon_marinus
ENSCING00000000524	-	98	57.412	ENSPCIG00000011561	SND1	98	57.412	Phascolarctos_cinereus
ENSCING00000000524	-	99	55.895	ENSPFOG00000001557	snd1	98	56.368	Poecilia_formosa
ENSCING00000000524	-	99	56.004	ENSPLAG00000018459	snd1	95	56.478	Poecilia_latipinna
ENSCING00000000524	-	99	56.004	ENSPMEG00000006803	snd1	98	56.478	Poecilia_mexicana
ENSCING00000000524	-	99	55.447	ENSPREG00000002189	snd1	98	56.146	Poecilia_reticulata
ENSCING00000000524	-	90	58.949	ENSPPYG00000017972	SND1	98	58.949	Pongo_abelii
ENSCING00000000524	-	98	48.505	ENSPCAG00000011305	SND1	98	48.726	Procavia_capensis
ENSCING00000000524	-	98	57.143	ENSPCOG00000026791	SND1	100	56.904	Propithecus_coquereli
ENSCING00000000524	-	98	55.703	ENSPVAG00000013945	SND1	98	55.703	Pteropus_vampyrus
ENSCING00000000524	-	99	56.786	ENSPNYG00000000932	snd1	98	57.364	Pundamilia_nyererei
ENSCING00000000524	-	99	56.526	ENSPNAG00000001206	snd1	98	57.222	Pygocentrus_nattereri
ENSCING00000000524	-	98	57.080	ENSRNOG00000031173	Snd1	100	56.589	Rattus_norvegicus
ENSCING00000000524	-	71	62.132	ENSRBIG00000027782	-	93	62.082	Rhinopithecus_bieti
ENSCING00000000524	-	99	56.188	ENSRROG00000033020	SND1	98	57.143	Rhinopithecus_roxellana
ENSCING00000000524	-	98	57.143	ENSSBOG00000032461	SND1	100	55.902	Saimiri_boliviensis_boliviensis
ENSCING00000000524	-	97	55.322	ENSSHAG00000015359	SND1	100	55.322	Sarcophilus_harrisii
ENSCING00000000524	-	98	56.167	ENSSFOG00015001103	snd1	98	56.167	Scleropages_formosus
ENSCING00000000524	-	98	56.478	ENSSMAG00000001932	snd1	93	56.216	Scophthalmus_maximus
ENSCING00000000524	-	99	56.291	ENSSDUG00000002699	snd1	92	56.589	Seriola_dumerili
ENSCING00000000524	-	99	51.407	ENSSLDG00000001950	snd1	98	51.602	Seriola_lalandi_dorsalis
ENSCING00000000524	-	86	55.912	ENSSARG00000004877	SND1	92	55.912	Sorex_araneus
ENSCING00000000524	-	71	56.143	ENSSPUG00000017586	SND1	96	56.048	Sphenodon_punctatus
ENSCING00000000524	-	74	60.368	ENSSPAG00000021398	snd1	96	60.684	Stegastes_partitus
ENSCING00000000524	-	98	57.032	ENSSSCG00000016590	SND1	98	57.032	Sus_scrofa
ENSCING00000000524	-	99	54.832	ENSTRUG00000014067	snd1	98	55.482	Takifugu_rubripes
ENSCING00000000524	-	99	55.375	ENSTNIG00000011019	snd1	95	61.092	Tetraodon_nigroviridis
ENSCING00000000524	-	93	51.916	ENSTBEG00000003999	SND1	100	51.916	Tupaia_belangeri
ENSCING00000000524	-	99	54.928	ENSTTRG00000006059	SND1	98	54.928	Tursiops_truncatus
ENSCING00000000524	-	85	58.700	ENSUAMG00000005604	-	93	58.700	Ursus_americanus
ENSCING00000000524	-	66	51.697	ENSUAMG00000002820	-	83	53.151	Ursus_americanus
ENSCING00000000524	-	98	57.080	ENSUMAG00000005960	SND1	98	57.080	Ursus_maritimus
ENSCING00000000524	-	74	56.995	ENSVPAG00000008302	SND1	74	56.995	Vicugna_pacos
ENSCING00000000524	-	99	55.700	ENSVVUG00000007226	SND1	98	56.811	Vulpes_vulpes
ENSCING00000000524	-	97	53.898	ENSXETG00000023043	snd1	100	54.721	Xenopus_tropicalis
ENSCING00000000524	-	92	53.728	ENSXCOG00000013629	snd1	98	53.964	Xiphophorus_couchianus
ENSCING00000000524	-	99	55.773	ENSXMAG00000011469	snd1	98	56.478	Xiphophorus_maculatus