EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000000529 (Gene tree)
Gene ID: 778799
Gene Symbol: zf(btb/c2h2)
Alias: -
Full Name: Ciona intestinalis zinc finger protein (zf(btb/c2h2))%2C mRNA.
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 7091 bases
Position: chr14:2030815-2037905
Accession: NM_001078386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000026213	zf-C2H2	PF00096.26	1.7e-28	1	6
ENSCINP00000026213	zf-C2H2	PF00096.26	1.7e-28	2	6
ENSCINP00000026213	zf-C2H2	PF00096.26	1.7e-28	3	6
ENSCINP00000026213	zf-C2H2	PF00096.26	1.7e-28	4	6
ENSCINP00000026213	zf-C2H2	PF00096.26	1.7e-28	5	6
ENSCINP00000026213	zf-C2H2	PF00096.26	1.7e-28	6	6
ENSCINP00000026213	zf-met	PF12874.7	8.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000026459	-	1745	XM_018814690	ENSCINP00000026213	467 (aa)	XP_018670235	Q4H2L1

Gene Model

Click here to download ENSCING00000000529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000000529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000000529	zf(btb/c2h2)	58	31.933	ENSAPEG00000007889	-	80	31.933	Amphiprion_percula
ENSCING00000000529	zf(btb/c2h2)	53	31.138	ENSAPEG00000019755	-	85	31.138	Amphiprion_percula
ENSCING00000000529	zf(btb/c2h2)	60	32.609	ENSCING00000004861	zf(c2h2)-12	76	31.373	Ciona_intestinalis
ENSCING00000000529	zf(btb/c2h2)	59	35.652	ENSCSAVG00000009574	-	99	35.652	Ciona_savignyi
ENSCING00000000529	zf(btb/c2h2)	54	32.857	ENSCSAVG00000005896	-	69	32.857	Ciona_savignyi
ENSCING00000000529	zf(btb/c2h2)	61	32.941	ENSCSEG00000005491	-	79	33.803	Cynoglossus_semilaevis
ENSCING00000000529	zf(btb/c2h2)	59	32.778	ENSCVAG00000002295	-	57	31.518	Cyprinodon_variegatus
ENSCING00000000529	zf(btb/c2h2)	58	30.909	ENSCVAG00000016098	-	99	30.909	Cyprinodon_variegatus
ENSCING00000000529	zf(btb/c2h2)	54	31.953	FBgn0033934	CG17385	80	31.953	Drosophila_melanogaster
ENSCING00000000529	zf(btb/c2h2)	58	34.862	ENSEBUG00000008392	-	74	31.696	Eptatretus_burgeri
ENSCING00000000529	zf(btb/c2h2)	59	31.349	ENSEBUG00000015522	-	68	31.349	Eptatretus_burgeri
ENSCING00000000529	zf(btb/c2h2)	58	35.652	ENSEBUG00000000735	-	98	35.652	Eptatretus_burgeri
ENSCING00000000529	zf(btb/c2h2)	53	33.333	ENSELUG00000020794	-	64	33.333	Esox_lucius
ENSCING00000000529	zf(btb/c2h2)	59	31.765	ENSFHEG00000013644	-	77	31.765	Fundulus_heteroclitus
ENSCING00000000529	zf(btb/c2h2)	58	31.963	ENSFHEG00000003596	-	59	31.963	Fundulus_heteroclitus
ENSCING00000000529	zf(btb/c2h2)	62	31.214	ENSFHEG00000020889	-	86	31.214	Fundulus_heteroclitus
ENSCING00000000529	zf(btb/c2h2)	63	31.879	ENSFHEG00000012990	-	90	31.879	Fundulus_heteroclitus
ENSCING00000000529	zf(btb/c2h2)	53	31.858	ENSGACG00000018415	-	88	31.858	Gasterosteus_aculeatus
ENSCING00000000529	zf(btb/c2h2)	54	34.409	ENSHCOG00000001313	-	52	34.409	Hippocampus_comes
ENSCING00000000529	zf(btb/c2h2)	53	33.962	ENSHCOG00000017437	-	70	33.962	Hippocampus_comes
ENSCING00000000529	zf(btb/c2h2)	62	34.579	ENSHCOG00000008181	-	69	34.579	Hippocampus_comes
ENSCING00000000529	zf(btb/c2h2)	54	32.161	ENSIPUG00000013526	-	71	32.161	Ictalurus_punctatus
ENSCING00000000529	zf(btb/c2h2)	56	33.990	ENSKMAG00000012909	-	88	34.158	Kryptolebias_marmoratus
ENSCING00000000529	zf(btb/c2h2)	55	32.273	ENSKMAG00000007658	-	86	32.273	Kryptolebias_marmoratus
ENSCING00000000529	zf(btb/c2h2)	60	32.749	ENSONIG00000016416	-	98	32.468	Oreochromis_niloticus
ENSCING00000000529	zf(btb/c2h2)	54	32.432	ENSONIG00000003471	-	99	32.432	Oreochromis_niloticus
ENSCING00000000529	zf(btb/c2h2)	58	32.000	ENSONIG00000007812	-	100	32.000	Oreochromis_niloticus
ENSCING00000000529	zf(btb/c2h2)	52	33.333	ENSONIG00000009894	-	99	33.333	Oreochromis_niloticus
ENSCING00000000529	zf(btb/c2h2)	53	30.137	ENSONIG00000003224	-	93	30.653	Oreochromis_niloticus
ENSCING00000000529	zf(btb/c2h2)	54	36.250	ENSORLG00015018254	-	89	36.250	Oryzias_latipes_hsok
ENSCING00000000529	zf(btb/c2h2)	55	42.857	ENSPMGG00000000218	-	62	31.606	Periophthalmus_magnuspinnatus
ENSCING00000000529	zf(btb/c2h2)	62	31.600	ENSPMGG00000022524	-	97	31.600	Periophthalmus_magnuspinnatus
ENSCING00000000529	zf(btb/c2h2)	53	34.568	ENSPMGG00000000489	-	71	34.568	Periophthalmus_magnuspinnatus
ENSCING00000000529	zf(btb/c2h2)	55	30.000	ENSPMGG00000010563	-	73	30.000	Periophthalmus_magnuspinnatus
ENSCING00000000529	zf(btb/c2h2)	60	30.233	ENSPMGG00000010664	-	94	30.233	Periophthalmus_magnuspinnatus
ENSCING00000000529	zf(btb/c2h2)	58	38.636	ENSPMGG00000000243	-	89	32.468	Periophthalmus_magnuspinnatus
ENSCING00000000529	zf(btb/c2h2)	54	33.058	ENSPMGG00000000458	-	95	30.918	Periophthalmus_magnuspinnatus
ENSCING00000000529	zf(btb/c2h2)	58	32.624	ENSPMAG00000007983	-	98	32.624	Petromyzon_marinus
ENSCING00000000529	zf(btb/c2h2)	56	33.333	ENSPFOG00000002879	-	100	33.333	Poecilia_formosa
ENSCING00000000529	zf(btb/c2h2)	54	34.409	ENSPFOG00000020691	-	83	30.493	Poecilia_formosa
ENSCING00000000529	zf(btb/c2h2)	63	32.124	ENSPLAG00000006174	-	72	32.558	Poecilia_latipinna
ENSCING00000000529	zf(btb/c2h2)	56	30.594	ENSPMEG00000019229	-	66	30.594	Poecilia_mexicana
ENSCING00000000529	zf(btb/c2h2)	74	31.349	ENSPMEG00000022676	-	99	31.200	Poecilia_mexicana
ENSCING00000000529	zf(btb/c2h2)	58	30.137	ENSPREG00000007146	-	65	30.137	Poecilia_reticulata
ENSCING00000000529	zf(btb/c2h2)	53	30.556	ENSPREG00000015352	-	63	30.556	Poecilia_reticulata
ENSCING00000000529	zf(btb/c2h2)	62	32.143	ENSPREG00000016204	-	64	31.481	Poecilia_reticulata
ENSCING00000000529	zf(btb/c2h2)	55	32.243	ENSSMAG00000000404	-	53	32.243	Scophthalmus_maximus
ENSCING00000000529	zf(btb/c2h2)	60	35.156	ENSSDUG00000000946	-	99	32.824	Seriola_dumerili
ENSCING00000000529	zf(btb/c2h2)	53	31.792	ENSXMAG00000022242	-	80	31.792	Xiphophorus_maculatus