EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000000609 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 972 bases
Position: chrHT000075.1:560697-561668
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000001147	zf-C2H2	PF00096.26	3.8e-44	1	7
ENSCINP00000001147	zf-C2H2	PF00096.26	3.8e-44	2	7
ENSCINP00000001147	zf-C2H2	PF00096.26	3.8e-44	3	7
ENSCINP00000001147	zf-C2H2	PF00096.26	3.8e-44	4	7
ENSCINP00000001147	zf-C2H2	PF00096.26	3.8e-44	5	7
ENSCINP00000001147	zf-C2H2	PF00096.26	3.8e-44	6	7
ENSCINP00000001147	zf-C2H2	PF00096.26	3.8e-44	7	7
ENSCINP00000001147	zf-met	PF12874.7	1.4e-11	1	2
ENSCINP00000001147	zf-met	PF12874.7	1.4e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000001147	-	972	-	ENSCINP00000001147	323 (aa)	-	Q1RLF1

Gene Model

Click here to download ENSCING00000000609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000000609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000000609	-	96	43.087	ENSATEG00000003344	-	69	43.464	Anabas_testudineus
ENSCING00000000609	-	99	41.624	ENSACLG00000019270	-	76	42.105	Astatotilapia_calliptera
ENSCING00000000609	-	99	40.968	ENSACLG00000011642	-	78	40.984	Astatotilapia_calliptera
ENSCING00000000609	-	99	46.048	ENSCING00000003072	-	95	45.196	Ciona_intestinalis
ENSCING00000000609	-	99	48.923	ENSCING00000020618	-	98	49.007	Ciona_intestinalis
ENSCING00000000609	-	99	45.016	ENSDARG00000110710	CU210890.1	96	44.702	Danio_rerio
ENSCING00000000609	-	96	45.763	ENSDNOG00000045100	-	96	46.207	Dasypus_novemcinctus
ENSCING00000000609	-	99	41.294	ENSEBUG00000015661	-	70	43.038	Eptatretus_burgeri
ENSCING00000000609	-	97	39.310	ENSEBUG00000013392	-	56	39.310	Eptatretus_burgeri
ENSCING00000000609	-	97	42.105	ENSEBUG00000015155	-	72	42.806	Eptatretus_burgeri
ENSCING00000000609	-	98	41.089	ENSIPUG00000007934	-	96	41.089	Ictalurus_punctatus
ENSCING00000000609	-	96	42.222	ENSIPUG00000005581	-	77	42.222	Ictalurus_punctatus
ENSCING00000000609	-	98	43.408	MGP_CAROLIEiJ_G0015655	-	78	44.186	Mus_caroli
ENSCING00000000609	-	98	42.424	ENSSLDG00000006217	-	77	44.715	Seriola_lalandi_dorsalis
ENSCING00000000609	-	98	42.424	ENSSLDG00000005868	-	79	44.715	Seriola_lalandi_dorsalis