EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000000633 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: X-ray repair cross-complementing protein 5
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 7657 bases
Position: chr13:927852-935508
Accession: 100177452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000001166	SAP	PF02037.27	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000001166	-	1893	XM_002122525	ENSCINP00000001166	603 (aa)	XP_002122561	F6RQS4

Gene Model

Click here to download ENSCING00000000633's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000000633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000000633	-	95	35.678	ENSG00000196419	XRCC6	97	35.949	Homo_sapiens
ENSCING00000000633	-	95	35.284	ENSAPOG00000012704	xrcc6	98	35.392	Acanthochromis_polyacanthus
ENSCING00000000633	-	95	34.423	ENSACIG00000021277	xrcc6	98	34.667	Amphilophus_citrinellus
ENSCING00000000633	-	95	34.596	ENSAOCG00000021344	xrcc6	99	34.098	Amphiprion_ocellaris
ENSCING00000000633	-	95	34.940	ENSAPEG00000020712	xrcc6	99	34.426	Amphiprion_percula
ENSCING00000000633	-	95	35.628	ENSATEG00000007119	xrcc6	98	35.644	Anabas_testudineus
ENSCING00000000633	-	90	35.727	ENSAPLG00000004469	XRCC6	98	35.727	Anas_platyrhynchos
ENSCING00000000633	-	95	35.506	ENSANAG00000018684	XRCC6	99	35.560	Aotus_nancymaae
ENSCING00000000633	-	97	32.209	ENSANAG00000020017	-	98	32.209	Aotus_nancymaae
ENSCING00000000633	-	95	30.782	ENSANAG00000035230	-	97	31.000	Aotus_nancymaae
ENSCING00000000633	-	95	30.862	ENSANAG00000023445	-	94	35.648	Aotus_nancymaae
ENSCING00000000633	-	95	34.940	ENSACLG00000018608	xrcc6	98	35.167	Astatotilapia_calliptera
ENSCING00000000633	-	98	34.992	ENSAMXG00000007545	xrcc6	98	34.992	Astyanax_mexicanus
ENSCING00000000633	-	95	35.678	ENSCJAG00000045512	XRCC6	98	35.548	Callithrix_jacchus
ENSCING00000000633	-	96	34.694	ENSTSYG00000011348	XRCC6	97	34.909	Carlito_syrichta
ENSCING00000000633	-	95	30.241	ENSCCAG00000037663	-	93	30.241	Cebus_capucinus
ENSCING00000000633	-	95	34.542	ENSCCAG00000030041	-	90	34.542	Cebus_capucinus
ENSCING00000000633	-	95	35.849	ENSCATG00000042366	XRCC6	98	36.000	Cercocebus_atys
ENSCING00000000633	-	96	34.014	ENSCLAG00000016669	XRCC6	95	34.014	Chinchilla_lanigera
ENSCING00000000633	-	95	35.849	ENSCSAG00000005784	XRCC6	95	35.849	Chlorocebus_sabaeus
ENSCING00000000633	-	96	36.074	ENSCPBG00000020535	XRCC6	99	35.703	Chrysemys_picta_bellii
ENSCING00000000633	-	95	35.849	ENSCANG00000031032	XRCC6	94	40.090	Colobus_angolensis_palliatus
ENSCING00000000633	-	96	31.633	ENSCGRG00001019029	Xrcc6	95	31.633	Cricetulus_griseus_chok1gshd
ENSCING00000000633	-	96	34.184	ENSCGRG00000001528	Xrcc6	96	34.184	Cricetulus_griseus_crigri
ENSCING00000000633	-	95	33.505	ENSCSEG00000020434	xrcc6	98	33.444	Cynoglossus_semilaevis
ENSCING00000000633	-	95	35.517	ENSCVAG00000002189	xrcc6	99	34.975	Cyprinodon_variegatus
ENSCING00000000633	-	95	36.116	ENSDARG00000071551	xrcc6	98	35.702	Danio_rerio
ENSCING00000000633	-	61	31.267	ENSETEG00000015333	-	60	31.267	Echinops_telfairi
ENSCING00000000633	-	96	34.242	ENSEASG00005001514	XRCC6	95	34.354	Equus_asinus_asinus
ENSCING00000000633	-	96	34.242	ENSECAG00000017563	XRCC6	99	34.446	Equus_caballus
ENSCING00000000633	-	95	34.536	ENSELUG00000020301	xrcc6	97	34.167	Esox_lucius
ENSCING00000000633	-	96	35.702	ENSFALG00000011908	XRCC6	93	35.452	Ficedula_albicollis
ENSCING00000000633	-	95	34.655	ENSFHEG00000016833	xrcc6	99	34.154	Fundulus_heteroclitus
ENSCING00000000633	-	84	40.550	ENSGMOG00000013524	xrcc6	88	40.550	Gadus_morhua
ENSCING00000000633	-	96	36.181	ENSGALG00000011932	XRCC6	98	35.703	Gallus_gallus
ENSCING00000000633	-	95	33.679	ENSGAFG00000008130	xrcc6	99	33.114	Gambusia_affinis
ENSCING00000000633	-	95	33.788	ENSGACG00000004868	xrcc6	94	33.788	Gasterosteus_aculeatus
ENSCING00000000633	-	96	36.333	ENSGAGG00000017518	XRCC6	99	35.948	Gopherus_agassizii
ENSCING00000000633	-	95	35.678	ENSGGOG00000015885	XRCC6	96	41.485	Gorilla_gorilla
ENSCING00000000633	-	92	34.744	ENSHBUG00000023281	xrcc6	99	34.744	Haplochromis_burtoni
ENSCING00000000633	-	96	33.163	ENSHGLG00000018078	XRCC6	96	33.163	Heterocephalus_glaber_female
ENSCING00000000633	-	96	33.163	ENSHGLG00100011264	XRCC6	96	33.163	Heterocephalus_glaber_male
ENSCING00000000633	-	95	33.959	ENSHCOG00000009821	xrcc6	99	33.496	Hippocampus_comes
ENSCING00000000633	-	96	34.407	ENSIPUG00000000767	xrcc6	98	34.328	Ictalurus_punctatus
ENSCING00000000633	-	96	34.014	ENSSTOG00000009490	XRCC6	95	34.014	Ictidomys_tridecemlineatus
ENSCING00000000633	-	96	32.594	ENSJJAG00000017136	Xrcc6	95	33.447	Jaculus_jaculus
ENSCING00000000633	-	95	34.596	ENSKMAG00000002141	xrcc6	99	33.934	Kryptolebias_marmoratus
ENSCING00000000633	-	95	35.112	ENSLBEG00000002691	xrcc6	97	35.167	Labrus_bergylta
ENSCING00000000633	-	79	36.275	ENSLOCG00000011533	xrcc6	97	36.275	Lepisosteus_oculatus
ENSCING00000000633	-	95	35.849	ENSMFAG00000003352	XRCC6	95	40.278	Macaca_fascicularis
ENSCING00000000633	-	95	35.849	ENSMMUG00000001856	XRCC6	97	36.131	Macaca_mulatta
ENSCING00000000633	-	97	35.630	ENSMNEG00000035076	XRCC6	98	35.935	Macaca_nemestrina
ENSCING00000000633	-	95	35.849	ENSMLEG00000019869	XRCC6	97	36.131	Mandrillus_leucophaeus
ENSCING00000000633	-	95	34.079	ENSMAMG00000003368	xrcc6	99	33.882	Mastacembelus_armatus
ENSCING00000000633	-	95	34.251	ENSMAMG00000003405	xrcc6	95	34.251	Mastacembelus_armatus
ENSCING00000000633	-	95	34.768	ENSMZEG00005028080	xrcc6	98	35.000	Maylandia_zebra
ENSCING00000000633	-	96	36.851	ENSMGAG00000012146	XRCC6	95	36.589	Meleagris_gallopavo
ENSCING00000000633	-	96	34.184	ENSMAUG00000017340	Xrcc6	96	34.184	Mesocricetus_auratus
ENSCING00000000633	-	96	34.524	ENSMOCG00000015717	Xrcc6	96	34.524	Microtus_ochrogaster
ENSCING00000000633	-	99	34.747	ENSMMOG00000003536	xrcc6	99	34.747	Mola_mola
ENSCING00000000633	-	95	34.079	ENSMALG00000013912	xrcc6	93	34.000	Monopterus_albus
ENSCING00000000633	-	96	30.782	MGP_CAROLIEiJ_G0020067	Xrcc6	95	30.782	Mus_caroli
ENSCING00000000633	-	96	33.333	ENSMUSG00000022471	Xrcc6	99	39.700	Mus_musculus
ENSCING00000000633	-	96	33.616	MGP_PahariEiJ_G0020069	Xrcc6	96	33.616	Mus_pahari
ENSCING00000000633	-	96	33.560	MGP_SPRETEiJ_G0020967	Xrcc6	99	33.560	Mus_spretus
ENSCING00000000633	-	96	33.786	ENSNGAG00000013750	Xrcc6	96	33.786	Nannospalax_galili
ENSCING00000000633	-	95	34.940	ENSNBRG00000004125	xrcc6	98	35.167	Neolamprologus_brichardi
ENSCING00000000633	-	96	33.106	ENSOPRG00000002386	XRCC6	99	33.106	Ochotona_princeps
ENSCING00000000633	-	96	33.791	ENSODEG00000015847	XRCC6	98	33.556	Octodon_degus
ENSCING00000000633	-	95	35.284	ENSONIG00000019715	xrcc6	99	34.754	Oreochromis_niloticus
ENSCING00000000633	-	61	39.344	ENSOANG00000011328	XRCC6	87	39.344	Ornithorhynchus_anatinus
ENSCING00000000633	-	95	34.134	ENSOCUG00000006948	XRCC6	95	34.130	Oryctolagus_cuniculus
ENSCING00000000633	-	95	35.395	ENSORLG00020007820	xrcc6	98	35.275	Oryzias_latipes_hni
ENSCING00000000633	-	95	35.334	ENSORLG00015006406	xrcc6	98	35.216	Oryzias_latipes_hsok
ENSCING00000000633	-	95	36.021	ENSOMEG00000008998	xrcc6	98	35.940	Oryzias_melastigma
ENSCING00000000633	-	96	35.314	ENSOGAG00000008821	XRCC6	96	35.314	Otolemur_garnettii
ENSCING00000000633	-	95	33.507	ENSPPAG00000037167	XRCC6	96	33.641	Pan_paniscus
ENSCING00000000633	-	95	35.678	ENSPTRG00000022548	XRCC6	98	35.870	Pan_troglodytes
ENSCING00000000633	-	95	35.678	ENSPTRG00000045824	XRCC6	98	35.870	Pan_troglodytes
ENSCING00000000633	-	97	35.462	ENSPANG00000001252	XRCC6	99	42.060	Papio_anubis
ENSCING00000000633	-	96	35.823	ENSPKIG00000003974	xrcc6	98	35.537	Paramormyrops_kingsleyae
ENSCING00000000633	-	94	33.916	ENSPMGG00000014220	xrcc6	98	34.014	Periophthalmus_magnuspinnatus
ENSCING00000000633	-	96	34.983	ENSPEMG00000023446	Xrcc6	96	34.983	Peromyscus_maniculatus_bairdii
ENSCING00000000633	-	95	33.904	ENSPCIG00000026409	XRCC6	98	33.719	Phascolarctos_cinereus
ENSCING00000000633	-	94	34.715	ENSPFOG00000017173	xrcc6	99	34.211	Poecilia_formosa
ENSCING00000000633	-	95	34.483	ENSPLAG00000000562	xrcc6	99	33.990	Poecilia_latipinna
ENSCING00000000633	-	94	34.888	ENSPMEG00000018478	xrcc6	97	34.950	Poecilia_mexicana
ENSCING00000000633	-	95	34.536	ENSPREG00000020957	xrcc6	91	34.775	Poecilia_reticulata
ENSCING00000000633	-	95	30.703	ENSPPYG00000011876	XRCC6	94	30.703	Pongo_abelii
ENSCING00000000633	-	96	34.524	ENSPVAG00000001168	XRCC6	99	34.102	Pteropus_vampyrus
ENSCING00000000633	-	95	34.940	ENSPNYG00000003815	xrcc6	98	33.597	Pundamilia_nyererei
ENSCING00000000633	-	96	33.616	ENSRNOG00000006392	Xrcc6	96	33.616	Rattus_norvegicus
ENSCING00000000633	-	95	34.134	ENSRBIG00000039794	XRCC6	98	33.333	Rhinopithecus_bieti
ENSCING00000000633	-	95	35.849	ENSRROG00000030297	XRCC6	94	40.553	Rhinopithecus_roxellana
ENSCING00000000633	-	66	34.158	ENSSBOG00000024724	-	97	34.158	Saimiri_boliviensis_boliviensis
ENSCING00000000633	-	96	33.390	ENSSHAG00000010790	XRCC6	99	32.951	Sarcophilus_harrisii
ENSCING00000000633	-	98	32.836	ENSSFOG00015014409	xrcc6	98	32.836	Scleropages_formosus
ENSCING00000000633	-	95	35.112	ENSSMAG00000006496	xrcc6	98	35.333	Scophthalmus_maximus
ENSCING00000000633	-	95	34.708	ENSSDUG00000007542	xrcc6	98	34.942	Seriola_dumerili
ENSCING00000000633	-	95	34.708	ENSSLDG00000009974	xrcc6	98	34.942	Seriola_lalandi_dorsalis
ENSCING00000000633	-	96	34.396	ENSSPUG00000012086	XRCC6	95	34.635	Sphenodon_punctatus
ENSCING00000000633	-	95	34.828	ENSSPAG00000015199	xrcc6	97	34.891	Stegastes_partitus
ENSCING00000000633	-	97	35.473	ENSTGUG00000009852	-	97	35.225	Taeniopygia_guttata
ENSCING00000000633	-	95	36.034	ENSTRUG00000017070	xrcc6	99	35.362	Takifugu_rubripes
ENSCING00000000633	-	95	34.524	ENSTNIG00000012947	xrcc6	98	34.524	Tetraodon_nigroviridis
ENSCING00000000633	-	95	32.474	ENSTBEG00000011736	XRCC6	99	32.474	Tupaia_belangeri
ENSCING00000000633	-	95	33.793	ENSXMAG00000009691	xrcc6	99	33.333	Xiphophorus_maculatus