EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000000716 (Gene tree)
Gene ID: 100175454
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3557 bases
Position: chr5:1887908-1891464
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000001336	Isy1	PF06246.12	5.3e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000001336	-	980	-	ENSCINP00000001336	276 (aa)	-	F6Q4Z2

Gene Model

Click here to download ENSCING00000000716's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000000716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000000716	-	99	63.860	ENSG00000240682	ISY1	99	65.263	Homo_sapiens
ENSCING00000000716	-	99	63.636	ENSG00000261796	ISY1-RAB43	86	65.035	Homo_sapiens
ENSCING00000000716	-	99	63.287	ENSAMEG00000015341	-	86	64.685	Ailuropoda_melanoleuca
ENSCING00000000716	-	65	73.333	ENSACIG00000014723	isy1	69	74.419	Amphilophus_citrinellus
ENSCING00000000716	-	99	64.539	ENSAOCG00000007147	isy1	99	64.539	Amphiprion_ocellaris
ENSCING00000000716	-	99	57.325	ENSAPEG00000021883	isy1	99	57.325	Amphiprion_percula
ENSCING00000000716	-	63	64.943	ENSATEG00000009521	isy1	87	56.744	Anabas_testudineus
ENSCING00000000716	-	100	56.631	ENSAPLG00000014136	-	100	55.914	Anas_platyrhynchos
ENSCING00000000716	-	91	61.089	ENSACAG00000013166	-	100	61.089	Anolis_carolinensis
ENSCING00000000716	-	99	64.211	ENSANAG00000027120	-	99	65.614	Aotus_nancymaae
ENSCING00000000716	-	99	59.489	ENSACLG00000014430	isy1	99	60.072	Astatotilapia_calliptera
ENSCING00000000716	-	99	64.437	ENSAMXG00000005423	isy1	99	64.437	Astyanax_mexicanus
ENSCING00000000716	-	99	62.105	ENSBTAG00000030915	ISY1	99	62.544	Bos_taurus
ENSCING00000000716	-	93	46.212	WBGene00009966	isy-1	99	46.212	Caenorhabditis_elegans
ENSCING00000000716	-	99	63.860	ENSCJAG00000017419	-	99	65.263	Callithrix_jacchus
ENSCING00000000716	-	99	63.158	ENSCAFG00000004333	ISY1	99	64.561	Canis_familiaris
ENSCING00000000716	-	99	63.158	ENSCAFG00020004867	-	99	64.561	Canis_lupus_dingo
ENSCING00000000716	-	99	63.158	ENSCHIG00000008237	-	99	63.636	Capra_hircus
ENSCING00000000716	-	99	63.860	ENSTSYG00000013897	-	99	65.263	Carlito_syrichta
ENSCING00000000716	-	97	54.044	ENSCAPG00000016359	-	99	52.612	Cavia_aperea
ENSCING00000000716	-	99	63.860	ENSCPOG00000014735	-	99	65.263	Cavia_porcellus
ENSCING00000000716	-	99	63.860	ENSCCAG00000028517	-	99	65.263	Cebus_capucinus
ENSCING00000000716	-	99	64.211	ENSCATG00000030672	-	99	65.614	Cercocebus_atys
ENSCING00000000716	-	99	63.636	ENSCLAG00000007518	-	99	64.437	Chinchilla_lanigera
ENSCING00000000716	-	99	64.211	ENSCSAG00000008798	-	99	65.614	Chlorocebus_sabaeus
ENSCING00000000716	-	99	63.929	ENSCPBG00000026346	-	99	63.571	Chrysemys_picta_bellii
ENSCING00000000716	-	99	89.964	ENSCSAVG00000008992	-	99	89.964	Ciona_savignyi
ENSCING00000000716	-	99	64.211	ENSCANG00000037761	-	99	65.614	Colobus_angolensis_palliatus
ENSCING00000000716	-	99	63.860	ENSCGRG00001003415	Isy1	99	64.912	Cricetulus_griseus_chok1gshd
ENSCING00000000716	-	99	63.860	ENSCGRG00000011641	Isy1	99	64.912	Cricetulus_griseus_crigri
ENSCING00000000716	-	87	60.800	ENSCSEG00000020382	isy1	94	61.200	Cynoglossus_semilaevis
ENSCING00000000716	-	99	65.357	ENSCVAG00000000650	isy1	99	65.357	Cyprinodon_variegatus
ENSCING00000000716	-	99	62.456	ENSDARG00000063466	isy1	99	62.456	Danio_rerio
ENSCING00000000716	-	99	62.937	ENSDNOG00000002763	-	99	63.732	Dasypus_novemcinctus
ENSCING00000000716	-	96	63.309	ENSDORG00000006886	Isy1	99	63.768	Dipodomys_ordii
ENSCING00000000716	-	95	54.815	FBgn0037550	CG9667	99	54.815	Drosophila_melanogaster
ENSCING00000000716	-	96	63.406	ENSETEG00000017009	-	100	64.493	Echinops_telfairi
ENSCING00000000716	-	96	60.072	ENSEASG00005015810	-	97	61.511	Equus_asinus_asinus
ENSCING00000000716	-	93	62.825	ENSECAG00000013768	-	88	64.312	Equus_caballus
ENSCING00000000716	-	100	62.369	ENSELUG00000000489	isy1	99	62.369	Esox_lucius
ENSCING00000000716	-	99	63.158	ENSFCAG00000008664	-	99	64.561	Felis_catus
ENSCING00000000716	-	99	62.007	ENSFALG00000014998	-	99	62.857	Ficedula_albicollis
ENSCING00000000716	-	99	65.000	ENSFALG00000000023	-	99	65.480	Ficedula_albicollis
ENSCING00000000716	-	96	63.082	ENSFDAG00000012661	-	94	64.516	Fukomys_damarensis
ENSCING00000000716	-	99	65.480	ENSFHEG00000006776	isy1	99	66.192	Fundulus_heteroclitus
ENSCING00000000716	-	78	77.143	ENSGMOG00000005635	isy1	70	77.143	Gadus_morhua
ENSCING00000000716	-	99	63.571	ENSGALG00000005012	-	99	63.066	Gallus_gallus
ENSCING00000000716	-	98	63.309	ENSGAFG00000019550	isy1	100	63.669	Gambusia_affinis
ENSCING00000000716	-	99	63.214	ENSGACG00000003342	isy1	99	64.664	Gasterosteus_aculeatus
ENSCING00000000716	-	97	63.971	ENSGAGG00000021274	-	98	63.035	Gopherus_agassizii
ENSCING00000000716	-	99	63.860	ENSGGOG00000038733	ISY1	99	65.263	Gorilla_gorilla
ENSCING00000000716	-	99	63.732	ENSHGLG00000002576	-	99	64.789	Heterocephalus_glaber_female
ENSCING00000000716	-	98	48.936	ENSHGLG00000017889	-	78	49.645	Heterocephalus_glaber_female
ENSCING00000000716	-	98	48.936	ENSHGLG00100005531	-	78	49.645	Heterocephalus_glaber_male
ENSCING00000000716	-	99	62.456	ENSHGLG00100004254	-	99	63.509	Heterocephalus_glaber_male
ENSCING00000000716	-	100	61.484	ENSHCOG00000014775	isy1	100	59.930	Hippocampus_comes
ENSCING00000000716	-	99	62.238	ENSIPUG00000011379	Isy1	99	63.287	Ictalurus_punctatus
ENSCING00000000716	-	99	64.336	ENSSTOG00000024769	-	99	65.385	Ictidomys_tridecemlineatus
ENSCING00000000716	-	77	60.538	ENSJJAG00000009635	Isy1	95	61.883	Jaculus_jaculus
ENSCING00000000716	-	99	62.633	ENSLACG00000004490	isy1	99	63.345	Latimeria_chalumnae
ENSCING00000000716	-	99	61.404	ENSLOCG00000013988	isy1	99	61.972	Lepisosteus_oculatus
ENSCING00000000716	-	99	57.244	ENSLAFG00000004015	-	99	58.246	Loxodonta_africana
ENSCING00000000716	-	99	64.211	ENSMFAG00000037074	-	99	65.614	Macaca_fascicularis
ENSCING00000000716	-	99	64.211	ENSMMUG00000011580	ISY1-RAB43	99	65.614	Macaca_mulatta
ENSCING00000000716	-	99	57.343	ENSMNEG00000043206	ISY1	99	58.741	Macaca_nemestrina
ENSCING00000000716	-	99	64.211	ENSMLEG00000033836	-	99	65.614	Mandrillus_leucophaeus
ENSCING00000000716	-	99	64.437	ENSMAMG00000009501	isy1	99	64.789	Mastacembelus_armatus
ENSCING00000000716	-	99	62.411	ENSMZEG00005012021	isy1	99	65.018	Maylandia_zebra
ENSCING00000000716	-	100	63.251	ENSMGAG00000005181	-	100	63.604	Meleagris_gallopavo
ENSCING00000000716	-	99	63.860	ENSMAUG00000008793	Isy1	99	64.912	Mesocricetus_auratus
ENSCING00000000716	-	96	63.538	ENSMICG00000037547	-	99	64.621	Microcebus_murinus
ENSCING00000000716	-	99	63.860	ENSMOCG00000000472	Isy1	99	65.263	Microtus_ochrogaster
ENSCING00000000716	-	100	58.503	ENSMMOG00000017810	isy1	100	58.503	Mola_mola
ENSCING00000000716	-	99	63.929	ENSMODG00000008387	-	99	63.929	Monodelphis_domestica
ENSCING00000000716	-	99	62.676	ENSMALG00000020650	isy1	99	64.085	Monopterus_albus
ENSCING00000000716	-	99	63.860	MGP_CAROLIEiJ_G0028619	Isy1	96	70.833	Mus_caroli
ENSCING00000000716	-	99	63.860	ENSMUSG00000030056	Isy1	96	70.833	Mus_musculus
ENSCING00000000716	-	99	55.944	MGP_PahariEiJ_G0022357	Isy1	99	56.690	Mus_pahari
ENSCING00000000716	-	99	63.860	MGP_SPRETEiJ_G0029631	Isy1	96	70.833	Mus_spretus
ENSCING00000000716	-	99	54.737	ENSMPUG00000017307	-	94	56.140	Mustela_putorius_furo
ENSCING00000000716	-	99	59.649	ENSMLUG00000011804	-	99	61.053	Myotis_lucifugus
ENSCING00000000716	-	99	63.860	ENSNGAG00000015207	Isy1	99	65.263	Nannospalax_galili
ENSCING00000000716	-	69	66.497	ENSNBRG00000006974	isy1	71	72.781	Neolamprologus_brichardi
ENSCING00000000716	-	99	64.211	ENSNLEG00000028747	ISY1	99	65.614	Nomascus_leucogenys
ENSCING00000000716	-	81	68.462	ENSMEUG00000008434	-	77	68.462	Notamacropus_eugenii
ENSCING00000000716	-	99	62.238	ENSOPRG00000005468	-	86	63.636	Ochotona_princeps
ENSCING00000000716	-	96	53.405	ENSODEG00000002067	-	95	55.197	Octodon_degus
ENSCING00000000716	-	87	59.761	ENSONIG00000000267	isy1	99	60.558	Oreochromis_niloticus
ENSCING00000000716	-	99	59.420	ENSOANG00000013141	-	99	59.420	Ornithorhynchus_anatinus
ENSCING00000000716	-	99	63.860	ENSOCUG00000003923	-	99	64.912	Oryctolagus_cuniculus
ENSCING00000000716	-	99	64.664	ENSORLG00000013250	isy1	99	65.371	Oryzias_latipes
ENSCING00000000716	-	99	64.311	ENSORLG00020020966	isy1	99	65.018	Oryzias_latipes_hni
ENSCING00000000716	-	99	65.018	ENSORLG00015017316	isy1	99	65.724	Oryzias_latipes_hsok
ENSCING00000000716	-	99	64.211	ENSOMEG00000023905	isy1	100	64.561	Oryzias_melastigma
ENSCING00000000716	-	99	63.986	ENSOGAG00000005142	-	99	65.385	Otolemur_garnettii
ENSCING00000000716	-	99	63.028	ENSOARG00000003231	-	93	63.732	Ovis_aries
ENSCING00000000716	-	99	63.860	ENSPPAG00000042141	-	99	65.263	Pan_paniscus
ENSCING00000000716	-	99	63.158	ENSPPRG00000003480	-	99	64.561	Panthera_pardus
ENSCING00000000716	-	99	63.158	ENSPTIG00000017919	-	99	64.561	Panthera_tigris_altaica
ENSCING00000000716	-	99	59.609	ENSPTRG00000015367	ISY1	99	60.912	Pan_troglodytes
ENSCING00000000716	-	99	64.211	ENSPANG00000004750	-	99	65.614	Papio_anubis
ENSCING00000000716	-	99	63.604	ENSPKIG00000024592	isy1	99	63.604	Paramormyrops_kingsleyae
ENSCING00000000716	-	99	62.989	ENSPSIG00000009384	-	99	63.345	Pelodiscus_sinensis
ENSCING00000000716	-	97	56.667	ENSPMGG00000016328	isy1	88	56.667	Periophthalmus_magnuspinnatus
ENSCING00000000716	-	99	63.509	ENSPEMG00000005390	Isy1	99	64.912	Peromyscus_maniculatus_bairdii
ENSCING00000000716	-	65	74.444	ENSPMAG00000005010	-	96	74.566	Petromyzon_marinus
ENSCING00000000716	-	99	63.929	ENSPCIG00000000466	-	74	63.929	Phascolarctos_cinereus
ENSCING00000000716	-	64	60.795	ENSPFOG00000010228	isy1	100	62.286	Poecilia_formosa
ENSCING00000000716	-	98	62.132	ENSPREG00000015121	isy1	100	61.765	Poecilia_reticulata
ENSCING00000000716	-	99	64.211	ENSPPYG00000013424	-	99	65.614	Pongo_abelii
ENSCING00000000716	-	99	58.033	ENSPCAG00000009535	-	99	58.958	Procavia_capensis
ENSCING00000000716	-	70	75.806	ENSPCOG00000025242	-	96	75.806	Propithecus_coquereli
ENSCING00000000716	-	99	63.986	ENSPNAG00000000703	isy1	99	64.789	Pygocentrus_nattereri
ENSCING00000000716	-	99	63.732	ENSRNOG00000010021	Isy1	99	64.789	Rattus_norvegicus
ENSCING00000000716	-	99	52.982	ENSRBIG00000028747	ISY1	99	54.035	Rhinopithecus_bieti
ENSCING00000000716	-	99	64.211	ENSRROG00000032314	ISY1	99	65.614	Rhinopithecus_roxellana
ENSCING00000000716	-	99	63.860	ENSSBOG00000029301	-	99	65.263	Saimiri_boliviensis_boliviensis
ENSCING00000000716	-	99	63.929	ENSSHAG00000017192	-	99	63.929	Sarcophilus_harrisii
ENSCING00000000716	-	99	64.460	ENSSFOG00015001127	isy1	99	64.460	Scleropages_formosus
ENSCING00000000716	-	99	65.141	ENSSMAG00000006601	isy1	99	66.197	Scophthalmus_maximus
ENSCING00000000716	-	99	65.018	ENSSDUG00000018291	isy1	99	65.018	Seriola_dumerili
ENSCING00000000716	-	99	65.371	ENSSLDG00000022252	isy1	99	65.371	Seriola_lalandi_dorsalis
ENSCING00000000716	-	63	51.913	ENSSARG00000007648	-	67	52.459	Sorex_araneus
ENSCING00000000716	-	99	62.278	ENSSPUG00000018050	-	99	63.345	Sphenodon_punctatus
ENSCING00000000716	-	62	71.930	ENSSPAG00000021900	isy1	60	73.006	Stegastes_partitus
ENSCING00000000716	-	99	64.085	ENSSSCG00000038900	-	99	64.789	Sus_scrofa
ENSCING00000000716	-	77	61.927	ENSTGUG00000003998	-	99	62.100	Taeniopygia_guttata
ENSCING00000000716	-	68	72.487	ENSTGUG00000007076	-	93	67.442	Taeniopygia_guttata
ENSCING00000000716	-	65	72.067	ENSTRUG00000002546	isy1	91	73.099	Takifugu_rubripes
ENSCING00000000716	-	99	62.094	ENSTNIG00000005224	isy1	99	62.094	Tetraodon_nigroviridis
ENSCING00000000716	-	59	71.795	ENSTBEG00000006938	-	100	54.091	Tupaia_belangeri
ENSCING00000000716	-	99	62.191	ENSTTRG00000015267	-	99	63.251	Tursiops_truncatus
ENSCING00000000716	-	99	63.158	ENSVVUG00000018261	-	99	64.561	Vulpes_vulpes
ENSCING00000000716	-	99	65.233	ENSXMAG00000012452	isy1	99	65.591	Xiphophorus_maculatus