EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001155 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-23-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 5857 bases
Position: chr1:112037-117893
Accession: 100182595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000002173	MMR_HSR1	PF01926.23	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000002173	-	1018	-	ENSCINP00000002173	243 (aa)	XP_002121180	F6YU98

Gene Model

Click here to download ENSCING00000001155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001155	-	99	67.355	ENSG00000112210	RAB23	99	65.702	Homo_sapiens
ENSCING00000001155	-	99	67.083	ENSAPOG00000008892	rab23	99	66.250	Acanthochromis_polyacanthus
ENSCING00000001155	-	99	67.078	ENSAMEG00000006825	RAB23	99	67.078	Ailuropoda_melanoleuca
ENSCING00000001155	-	100	61.728	ENSACIG00000020496	rab23	100	60.082	Amphilophus_citrinellus
ENSCING00000001155	-	100	66.255	ENSAOCG00000004234	rab23	100	65.432	Amphiprion_ocellaris
ENSCING00000001155	-	100	66.255	ENSAPEG00000019758	rab23	100	65.432	Amphiprion_percula
ENSCING00000001155	-	100	66.667	ENSATEG00000020913	rab23	100	65.844	Anabas_testudineus
ENSCING00000001155	-	73	77.966	ENSAPLG00000003715	RAB23	99	77.966	Anas_platyrhynchos
ENSCING00000001155	-	99	64.050	ENSACAG00000006656	RAB23	99	63.636	Anolis_carolinensis
ENSCING00000001155	-	99	65.702	ENSANAG00000027052	-	99	65.702	Aotus_nancymaae
ENSCING00000001155	-	100	67.078	ENSACLG00000002819	rab23	100	66.255	Astatotilapia_calliptera
ENSCING00000001155	-	100	65.984	ENSAMXG00000014960	rab23	100	65.844	Astyanax_mexicanus
ENSCING00000001155	-	99	65.844	ENSBTAG00000005362	RAB23	99	65.844	Bos_taurus
ENSCING00000001155	-	99	65.702	ENSCJAG00000010247	RAB23	99	65.702	Callithrix_jacchus
ENSCING00000001155	-	99	66.255	ENSCAFG00000002459	RAB23	99	66.255	Canis_familiaris
ENSCING00000001155	-	99	66.255	ENSCAFG00020015900	RAB23	99	66.255	Canis_lupus_dingo
ENSCING00000001155	-	99	65.844	ENSCHIG00000009815	RAB23	99	65.844	Capra_hircus
ENSCING00000001155	-	100	65.432	ENSTSYG00000029126	RAB23	100	64.609	Carlito_syrichta
ENSCING00000001155	-	99	65.702	ENSCPOG00000030218	RAB23	99	65.702	Cavia_porcellus
ENSCING00000001155	-	99	65.289	ENSCCAG00000020364	RAB23	99	65.289	Cebus_capucinus
ENSCING00000001155	-	99	65.702	ENSCATG00000027876	RAB23	99	65.702	Cercocebus_atys
ENSCING00000001155	-	99	66.116	ENSCLAG00000000797	RAB23	99	65.702	Chinchilla_lanigera
ENSCING00000001155	-	99	66.529	ENSCSAG00000013438	RAB23	99	66.116	Chlorocebus_sabaeus
ENSCING00000001155	-	99	64.198	ENSCPBG00000022640	RAB23	99	63.786	Chrysemys_picta_bellii
ENSCING00000001155	-	100	83.128	ENSCSAVG00000001356	-	100	84.362	Ciona_savignyi
ENSCING00000001155	-	99	65.289	ENSCANG00000031065	RAB23	99	65.289	Colobus_angolensis_palliatus
ENSCING00000001155	-	99	67.078	ENSCGRG00001008994	Rab23	99	67.078	Cricetulus_griseus_chok1gshd
ENSCING00000001155	-	99	66.116	ENSCGRG00000013630	Rab23	99	66.116	Cricetulus_griseus_crigri
ENSCING00000001155	-	100	60.494	ENSCSEG00000010565	rab23	100	58.197	Cynoglossus_semilaevis
ENSCING00000001155	-	100	65.984	ENSCVAG00000020501	rab23	100	65.984	Cyprinodon_variegatus
ENSCING00000001155	-	100	67.901	ENSDARG00000004151	rab23	100	67.078	Danio_rerio
ENSCING00000001155	-	99	65.289	ENSDNOG00000015501	RAB23	99	65.289	Dasypus_novemcinctus
ENSCING00000001155	-	100	64.754	ENSDORG00000028344	Rab23	100	64.754	Dipodomys_ordii
ENSCING00000001155	-	100	54.510	FBgn0037364	Rab23	90	54.902	Drosophila_melanogaster
ENSCING00000001155	-	96	59.072	ENSEBUG00000010861	-	91	59.072	Eptatretus_burgeri
ENSCING00000001155	-	99	64.876	ENSEASG00005003529	RAB23	99	64.876	Equus_asinus_asinus
ENSCING00000001155	-	99	65.289	ENSECAG00000013427	RAB23	99	65.289	Equus_caballus
ENSCING00000001155	-	100	65.432	ENSEEUG00000015045	RAB23	100	65.432	Erinaceus_europaeus
ENSCING00000001155	-	100	67.347	ENSELUG00000020788	rab23	100	67.347	Esox_lucius
ENSCING00000001155	-	99	64.876	ENSFCAG00000044358	RAB23	99	64.876	Felis_catus
ENSCING00000001155	-	99	64.876	ENSFALG00000001708	RAB23	99	64.463	Ficedula_albicollis
ENSCING00000001155	-	99	64.463	ENSFDAG00000014834	RAB23	99	64.050	Fukomys_damarensis
ENSCING00000001155	-	100	64.609	ENSFHEG00000023069	rab23	100	64.609	Fundulus_heteroclitus
ENSCING00000001155	-	100	67.078	ENSGMOG00000005102	rab23	100	66.255	Gadus_morhua
ENSCING00000001155	-	99	65.021	ENSGALG00000016279	RAB23	99	64.198	Gallus_gallus
ENSCING00000001155	-	100	67.078	ENSGAFG00000007684	rab23	100	66.255	Gambusia_affinis
ENSCING00000001155	-	100	66.255	ENSGACG00000006151	rab23	100	65.021	Gasterosteus_aculeatus
ENSCING00000001155	-	99	64.609	ENSGAGG00000012709	RAB23	99	64.198	Gopherus_agassizii
ENSCING00000001155	-	100	62.140	ENSHBUG00000007966	rab23	100	61.317	Haplochromis_burtoni
ENSCING00000001155	-	99	53.909	ENSHGLG00000009371	-	99	50.617	Heterocephalus_glaber_female
ENSCING00000001155	-	99	65.289	ENSHGLG00000013030	-	99	65.289	Heterocephalus_glaber_female
ENSCING00000001155	-	99	53.909	ENSHGLG00100017177	-	99	50.617	Heterocephalus_glaber_male
ENSCING00000001155	-	99	65.289	ENSHGLG00100005945	-	99	65.289	Heterocephalus_glaber_male
ENSCING00000001155	-	100	60.905	ENSHCOG00000013919	rab23	100	61.317	Hippocampus_comes
ENSCING00000001155	-	100	61.317	ENSIPUG00000016494	rab23	78	81.366	Ictalurus_punctatus
ENSCING00000001155	-	99	66.942	ENSSTOG00000010962	RAB23	99	66.529	Ictidomys_tridecemlineatus
ENSCING00000001155	-	99	65.289	ENSJJAG00000020094	Rab23	99	65.289	Jaculus_jaculus
ENSCING00000001155	-	100	65.844	ENSKMAG00000018270	rab23	100	65.021	Kryptolebias_marmoratus
ENSCING00000001155	-	99	66.942	ENSLBEG00000013176	rab23	99	66.116	Labrus_bergylta
ENSCING00000001155	-	100	65.021	ENSLACG00000004025	RAB23	100	65.021	Latimeria_chalumnae
ENSCING00000001155	-	100	66.531	ENSLOCG00000016999	rab23	100	66.531	Lepisosteus_oculatus
ENSCING00000001155	-	99	65.289	ENSLAFG00000007209	RAB23	99	65.289	Loxodonta_africana
ENSCING00000001155	-	99	65.702	ENSMFAG00000032369	RAB23	99	65.702	Macaca_fascicularis
ENSCING00000001155	-	99	65.702	ENSMMUG00000018003	RAB23	99	65.702	Macaca_mulatta
ENSCING00000001155	-	99	65.702	ENSMNEG00000037012	RAB23	99	65.702	Macaca_nemestrina
ENSCING00000001155	-	99	65.702	ENSMLEG00000042429	RAB23	99	65.702	Mandrillus_leucophaeus
ENSCING00000001155	-	100	65.021	ENSMAMG00000015456	rab23	100	65.432	Mastacembelus_armatus
ENSCING00000001155	-	100	67.078	ENSMZEG00005005441	rab23	100	66.255	Maylandia_zebra
ENSCING00000001155	-	99	66.667	ENSMGAG00000013882	RAB23	99	65.021	Meleagris_gallopavo
ENSCING00000001155	-	99	65.289	ENSMICG00000014037	RAB23	99	65.289	Microcebus_murinus
ENSCING00000001155	-	99	66.667	ENSMOCG00000000444	Rab23	99	66.667	Microtus_ochrogaster
ENSCING00000001155	-	100	61.317	ENSMMOG00000007703	rab23	100	60.494	Mola_mola
ENSCING00000001155	-	99	64.876	ENSMODG00000018720	RAB23	99	64.463	Monodelphis_domestica
ENSCING00000001155	-	100	64.609	ENSMALG00000002136	rab23	100	64.198	Monopterus_albus
ENSCING00000001155	-	99	67.490	MGP_CAROLIEiJ_G0014015	Rab23	99	67.490	Mus_caroli
ENSCING00000001155	-	99	67.769	ENSMUSG00000004768	Rab23	99	66.942	Mus_musculus
ENSCING00000001155	-	99	66.667	MGP_PahariEiJ_G0027261	Rab23	99	66.667	Mus_pahari
ENSCING00000001155	-	99	67.490	MGP_SPRETEiJ_G0014820	Rab23	99	67.490	Mus_spretus
ENSCING00000001155	-	99	63.115	ENSMPUG00000002642	RAB23	99	62.140	Mustela_putorius_furo
ENSCING00000001155	-	99	65.702	ENSMLUG00000004058	RAB23	99	65.289	Myotis_lucifugus
ENSCING00000001155	-	99	65.289	ENSNGAG00000018038	Rab23	99	65.289	Nannospalax_galili
ENSCING00000001155	-	100	67.078	ENSNBRG00000013691	rab23	100	66.255	Neolamprologus_brichardi
ENSCING00000001155	-	99	66.529	ENSNLEG00000027830	RAB23	99	66.116	Nomascus_leucogenys
ENSCING00000001155	-	99	65.702	ENSODEG00000016056	RAB23	99	65.289	Octodon_degus
ENSCING00000001155	-	100	66.255	ENSONIG00000009749	rab23	100	65.432	Oreochromis_niloticus
ENSCING00000001155	-	99	65.289	ENSOANG00000001398	RAB23	99	64.463	Ornithorhynchus_anatinus
ENSCING00000001155	-	99	65.702	ENSOCUG00000004816	RAB23	99	65.702	Oryctolagus_cuniculus
ENSCING00000001155	-	100	65.021	ENSORLG00000010115	rab23	100	63.374	Oryzias_latipes
ENSCING00000001155	-	100	65.021	ENSORLG00020020220	rab23	100	63.374	Oryzias_latipes_hni
ENSCING00000001155	-	100	64.609	ENSORLG00015004033	rab23	100	62.963	Oryzias_latipes_hsok
ENSCING00000001155	-	100	65.844	ENSOMEG00000001706	rab23	100	64.198	Oryzias_melastigma
ENSCING00000001155	-	99	66.116	ENSOGAG00000005675	RAB23	99	65.289	Otolemur_garnettii
ENSCING00000001155	-	99	65.844	ENSOARG00000005749	RAB23	99	65.844	Ovis_aries
ENSCING00000001155	-	99	66.116	ENSPPAG00000010023	RAB23	99	66.116	Pan_paniscus
ENSCING00000001155	-	99	64.463	ENSPPRG00000012453	RAB23	99	64.463	Panthera_pardus
ENSCING00000001155	-	99	64.876	ENSPTIG00000009435	RAB23	99	64.876	Panthera_tigris_altaica
ENSCING00000001155	-	99	66.529	ENSPTRG00000043341	RAB23	99	66.116	Pan_troglodytes
ENSCING00000001155	-	99	65.702	ENSPANG00000017772	RAB23	99	65.702	Papio_anubis
ENSCING00000001155	-	78	75.661	ENSPKIG00000024310	rab23	93	75.661	Paramormyrops_kingsleyae
ENSCING00000001155	-	99	64.463	ENSPSIG00000015579	RAB23	99	64.050	Pelodiscus_sinensis
ENSCING00000001155	-	100	62.140	ENSPMGG00000008577	rab23	100	61.728	Periophthalmus_magnuspinnatus
ENSCING00000001155	-	99	67.078	ENSPEMG00000023271	Rab23	99	67.078	Peromyscus_maniculatus_bairdii
ENSCING00000001155	-	99	58.333	ENSPMAG00000006835	-	100	57.202	Petromyzon_marinus
ENSCING00000001155	-	99	64.463	ENSPCIG00000007267	RAB23	99	64.050	Phascolarctos_cinereus
ENSCING00000001155	-	100	66.667	ENSPFOG00000011493	rab23	100	65.844	Poecilia_formosa
ENSCING00000001155	-	100	66.255	ENSPLAG00000011697	rab23	100	65.432	Poecilia_latipinna
ENSCING00000001155	-	100	66.667	ENSPMEG00000017300	rab23	100	65.844	Poecilia_mexicana
ENSCING00000001155	-	100	61.728	ENSPREG00000022509	rab23	100	60.905	Poecilia_reticulata
ENSCING00000001155	-	99	66.529	ENSPPYG00000016739	RAB23	99	66.116	Pongo_abelii
ENSCING00000001155	-	99	65.289	ENSPCOG00000028471	RAB23	99	64.876	Propithecus_coquereli
ENSCING00000001155	-	99	60.331	ENSPVAG00000017693	RAB23	99	60.331	Pteropus_vampyrus
ENSCING00000001155	-	100	67.078	ENSPNYG00000019639	rab23	100	66.255	Pundamilia_nyererei
ENSCING00000001155	-	100	66.255	ENSPNAG00000024728	rab23	100	65.844	Pygocentrus_nattereri
ENSCING00000001155	-	99	68.313	ENSRNOG00000012629	Rab23	99	68.313	Rattus_norvegicus
ENSCING00000001155	-	99	63.158	ENSRBIG00000030547	RAB23	99	62.753	Rhinopithecus_bieti
ENSCING00000001155	-	99	65.702	ENSRROG00000035920	RAB23	99	65.702	Rhinopithecus_roxellana
ENSCING00000001155	-	99	65.289	ENSSBOG00000033237	RAB23	99	65.289	Saimiri_boliviensis_boliviensis
ENSCING00000001155	-	99	64.463	ENSSHAG00000006379	RAB23	99	64.050	Sarcophilus_harrisii
ENSCING00000001155	-	100	65.432	ENSSFOG00015012604	rab23	100	65.844	Scleropages_formosus
ENSCING00000001155	-	99	66.116	ENSSMAG00000006341	rab23	99	65.289	Scophthalmus_maximus
ENSCING00000001155	-	100	65.844	ENSSDUG00000023508	rab23	100	65.021	Seriola_dumerili
ENSCING00000001155	-	100	65.844	ENSSLDG00000000287	rab23	100	65.021	Seriola_lalandi_dorsalis
ENSCING00000001155	-	99	64.609	ENSSARG00000013689	RAB23	99	64.609	Sorex_araneus
ENSCING00000001155	-	99	64.463	ENSSPUG00000006274	RAB23	99	64.050	Sphenodon_punctatus
ENSCING00000001155	-	100	66.255	ENSSPAG00000010373	rab23	100	65.432	Stegastes_partitus
ENSCING00000001155	-	99	63.223	ENSSSCG00000029539	RAB23	99	64.609	Sus_scrofa
ENSCING00000001155	-	99	64.876	ENSTGUG00000012794	RAB23	99	64.463	Taeniopygia_guttata
ENSCING00000001155	-	100	65.432	ENSTRUG00000015697	rab23	100	64.609	Takifugu_rubripes
ENSCING00000001155	-	100	67.623	ENSTNIG00000016575	rab23	100	65.984	Tetraodon_nigroviridis
ENSCING00000001155	-	99	66.667	ENSUAMG00000013367	RAB23	99	66.667	Ursus_americanus
ENSCING00000001155	-	99	66.667	ENSUMAG00000018629	RAB23	99	66.667	Ursus_maritimus
ENSCING00000001155	-	73	56.497	ENSVPAG00000006805	RAB23	64	87.500	Vicugna_pacos
ENSCING00000001155	-	99	65.844	ENSVVUG00000008535	RAB23	99	65.844	Vulpes_vulpes
ENSCING00000001155	-	99	60.744	ENSXETG00000004449	rab23	100	59.671	Xenopus_tropicalis
ENSCING00000001155	-	100	66.667	ENSXCOG00000011864	rab23	100	65.844	Xiphophorus_couchianus
ENSCING00000001155	-	100	67.078	ENSXMAG00000009387	rab23	100	66.255	Xiphophorus_maculatus