EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001176 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 10035 bases
Position: chr1:8517573-8527607
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000002591	DEAD	PF00270.29	1.5e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000002591	-	2254	-	ENSCINP00000002591	740 (aa)	-	F6W8K8

Gene Model

Click here to download ENSCING00000001176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001176	-	100	65.508	ENSG00000079785	DDX1	100	65.684	Homo_sapiens
ENSCING00000001176	-	100	66.133	ENSAPOG00000003166	ddx1	100	66.127	Acanthochromis_polyacanthus
ENSCING00000001176	-	99	65.060	ENSAMEG00000001071	DDX1	99	65.235	Ailuropoda_melanoleuca
ENSCING00000001176	-	89	64.448	ENSACIG00000017422	ddx1	99	65.053	Amphilophus_citrinellus
ENSCING00000001176	-	88	67.976	ENSAOCG00000015436	ddx1	94	69.279	Amphiprion_ocellaris
ENSCING00000001176	-	100	66.711	ENSAPEG00000007699	ddx1	100	66.757	Amphiprion_percula
ENSCING00000001176	-	94	67.286	ENSATEG00000003965	ddx1	98	65.356	Anabas_testudineus
ENSCING00000001176	-	100	66.135	ENSAPLG00000011093	DDX1	100	65.824	Anas_platyrhynchos
ENSCING00000001176	-	94	66.289	ENSACAG00000011036	DDX1	100	66.193	Anolis_carolinensis
ENSCING00000001176	-	100	65.508	ENSANAG00000037912	DDX1	100	65.684	Aotus_nancymaae
ENSCING00000001176	-	99	66.086	ENSACLG00000008850	ddx1	99	65.809	Astatotilapia_calliptera
ENSCING00000001176	-	100	66.176	ENSAMXG00000002100	ddx1	100	65.952	Astyanax_mexicanus
ENSCING00000001176	-	100	65.154	ENSBTAG00000009906	DDX1	100	65.282	Bos_taurus
ENSCING00000001176	-	98	44.640	WBGene00021938	Y55F3BR.1	98	44.640	Caenorhabditis_elegans
ENSCING00000001176	-	100	65.508	ENSCJAG00000007076	DDX1	100	65.684	Callithrix_jacchus
ENSCING00000001176	-	100	65.241	ENSCAFG00000003686	DDX1	100	65.416	Canis_familiaris
ENSCING00000001176	-	100	65.241	ENSCAFG00020026083	DDX1	100	65.416	Canis_lupus_dingo
ENSCING00000001176	-	100	65.421	ENSCHIG00000011046	DDX1	100	65.550	Capra_hircus
ENSCING00000001176	-	98	48.630	ENSTSYG00000037396	-	98	48.405	Carlito_syrichta
ENSCING00000001176	-	100	65.241	ENSTSYG00000002477	-	100	65.416	Carlito_syrichta
ENSCING00000001176	-	86	53.478	ENSCAPG00000008906	-	93	53.478	Cavia_aperea
ENSCING00000001176	-	86	64.441	ENSCPOG00000009816	-	94	64.441	Cavia_porcellus
ENSCING00000001176	-	68	64.497	ENSCPOG00000032467	-	100	64.752	Cavia_porcellus
ENSCING00000001176	-	100	65.374	ENSCCAG00000030085	DDX1	100	65.550	Cebus_capucinus
ENSCING00000001176	-	100	65.775	ENSCATG00000033924	DDX1	100	65.952	Cercocebus_atys
ENSCING00000001176	-	100	64.706	ENSCLAG00000005434	DDX1	100	64.879	Chinchilla_lanigera
ENSCING00000001176	-	100	65.775	ENSCSAG00000007883	DDX1	100	65.952	Chlorocebus_sabaeus
ENSCING00000001176	-	70	66.118	ENSCHOG00000002171	DDX1	70	66.118	Choloepus_hoffmanni
ENSCING00000001176	-	99	60.081	ENSCPBG00000013330	DDX1	99	66.827	Chrysemys_picta_bellii
ENSCING00000001176	-	99	76.351	ENSCSAVG00000003028	-	100	76.119	Ciona_savignyi
ENSCING00000001176	-	100	65.775	ENSCANG00000031530	DDX1	100	65.952	Colobus_angolensis_palliatus
ENSCING00000001176	-	100	65.642	ENSCGRG00001013025	Ddx1	100	65.818	Cricetulus_griseus_chok1gshd
ENSCING00000001176	-	100	65.642	ENSCGRG00000000676	Ddx1	100	65.818	Cricetulus_griseus_crigri
ENSCING00000001176	-	99	66.712	ENSCSEG00000002630	ddx1	100	66.486	Cynoglossus_semilaevis
ENSCING00000001176	-	99	66.487	ENSCVAG00000020927	ddx1	100	66.486	Cyprinodon_variegatus
ENSCING00000001176	-	100	64.572	ENSDARG00000032117	ddx1	100	64.459	Danio_rerio
ENSCING00000001176	-	100	65.642	ENSDNOG00000006905	DDX1	100	65.818	Dasypus_novemcinctus
ENSCING00000001176	-	100	65.508	ENSDORG00000012847	Ddx1	100	65.684	Dipodomys_ordii
ENSCING00000001176	-	98	56.712	FBgn0015075	Ddx1	99	56.575	Drosophila_melanogaster
ENSCING00000001176	-	100	59.920	ENSETEG00000014259	DDX1	100	59.920	Echinops_telfairi
ENSCING00000001176	-	62	65.733	ENSEBUG00000009800	-	97	65.733	Eptatretus_burgeri
ENSCING00000001176	-	100	65.508	ENSEASG00005009335	DDX1	92	65.684	Equus_asinus_asinus
ENSCING00000001176	-	94	65.106	ENSECAG00000016396	DDX1	100	65.292	Equus_caballus
ENSCING00000001176	-	88	62.430	ENSEEUG00000001606	DDX1	89	62.430	Erinaceus_europaeus
ENSCING00000001176	-	100	64.887	ENSELUG00000006743	ddx1	100	64.777	Esox_lucius
ENSCING00000001176	-	100	65.508	ENSFCAG00000004680	DDX1	100	65.684	Felis_catus
ENSCING00000001176	-	100	66.267	ENSFALG00000008696	DDX1	100	66.399	Ficedula_albicollis
ENSCING00000001176	-	100	64.572	ENSFDAG00000021305	DDX1	100	64.745	Fukomys_damarensis
ENSCING00000001176	-	100	66.890	ENSFHEG00000008444	ddx1	100	66.892	Fundulus_heteroclitus
ENSCING00000001176	-	100	64.085	ENSGMOG00000011300	ddx1	100	64.085	Gadus_morhua
ENSCING00000001176	-	100	65.867	ENSGALG00000016461	DDX1	100	65.997	Gallus_gallus
ENSCING00000001176	-	100	66.444	ENSGAFG00000004706	ddx1	100	66.220	Gambusia_affinis
ENSCING00000001176	-	100	64.887	ENSGACG00000011162	ddx1	100	64.745	Gasterosteus_aculeatus
ENSCING00000001176	-	100	65.107	ENSGAGG00000021020	DDX1	100	65.013	Gopherus_agassizii
ENSCING00000001176	-	100	65.508	ENSGGOG00000012482	DDX1	100	65.684	Gorilla_gorilla
ENSCING00000001176	-	100	66.088	ENSHBUG00000014069	ddx1	100	66.086	Haplochromis_burtoni
ENSCING00000001176	-	100	64.706	ENSHGLG00000000801	DDX1	100	64.879	Heterocephalus_glaber_female
ENSCING00000001176	-	99	64.825	ENSHGLG00100000711	DDX1	100	65.000	Heterocephalus_glaber_male
ENSCING00000001176	-	100	66.622	ENSHCOG00000011492	ddx1	96	66.622	Hippocampus_comes
ENSCING00000001176	-	100	64.973	ENSIPUG00000003494	ddx1	100	64.745	Ictalurus_punctatus
ENSCING00000001176	-	99	65.768	ENSSTOG00000003977	DDX1	100	65.946	Ictidomys_tridecemlineatus
ENSCING00000001176	-	89	61.876	ENSJJAG00000013315	Ddx1	100	61.876	Jaculus_jaculus
ENSCING00000001176	-	100	66.355	ENSKMAG00000011340	ddx1	100	66.354	Kryptolebias_marmoratus
ENSCING00000001176	-	89	62.424	ENSLBEG00000008692	ddx1	99	62.424	Labrus_bergylta
ENSCING00000001176	-	100	64.619	ENSLACG00000010529	DDX1	100	64.611	Latimeria_chalumnae
ENSCING00000001176	-	99	64.305	ENSLOCG00000016473	ddx1	99	64.161	Lepisosteus_oculatus
ENSCING00000001176	-	99	65.282	ENSLAFG00000002213	DDX1	99	65.276	Loxodonta_africana
ENSCING00000001176	-	100	65.775	ENSMFAG00000033987	DDX1	100	65.952	Macaca_fascicularis
ENSCING00000001176	-	100	65.775	ENSMMUG00000023437	DDX1	100	65.952	Macaca_mulatta
ENSCING00000001176	-	100	65.775	ENSMNEG00000029189	DDX1	100	65.952	Macaca_nemestrina
ENSCING00000001176	-	100	65.775	ENSMLEG00000030787	DDX1	100	65.952	Mandrillus_leucophaeus
ENSCING00000001176	-	100	65.421	ENSMAMG00000015916	ddx1	100	65.416	Mastacembelus_armatus
ENSCING00000001176	-	99	66.086	ENSMZEG00005015207	ddx1	99	65.809	Maylandia_zebra
ENSCING00000001176	-	99	64.027	ENSMGAG00000014025	DDX1	100	63.710	Meleagris_gallopavo
ENSCING00000001176	-	67	76.364	ENSMAUG00000016156	Ddx1	100	76.364	Mesocricetus_auratus
ENSCING00000001176	-	100	65.508	ENSMICG00000001023	DDX1	100	65.684	Microcebus_murinus
ENSCING00000001176	-	100	65.642	ENSMOCG00000000257	Ddx1	100	65.818	Microtus_ochrogaster
ENSCING00000001176	-	89	64.750	ENSMMOG00000015397	ddx1	99	64.750	Mola_mola
ENSCING00000001176	-	99	65.772	ENSMODG00000010275	DDX1	99	65.949	Monodelphis_domestica
ENSCING00000001176	-	100	65.821	ENSMALG00000016409	ddx1	100	65.818	Monopterus_albus
ENSCING00000001176	-	100	65.775	MGP_CAROLIEiJ_G0017622	Ddx1	100	65.952	Mus_caroli
ENSCING00000001176	-	100	65.374	ENSMUSG00000037149	Ddx1	100	67.368	Mus_musculus
ENSCING00000001176	-	100	65.508	MGP_PahariEiJ_G0029378	Ddx1	100	65.684	Mus_pahari
ENSCING00000001176	-	100	65.374	MGP_SPRETEiJ_G0018464	Ddx1	97	70.588	Mus_spretus
ENSCING00000001176	-	100	65.241	ENSMPUG00000013606	DDX1	100	65.416	Mustela_putorius_furo
ENSCING00000001176	-	99	65.229	ENSMLUG00000003027	DDX1	98	65.405	Myotis_lucifugus
ENSCING00000001176	-	99	65.903	ENSNGAG00000015783	Ddx1	100	66.081	Nannospalax_galili
ENSCING00000001176	-	79	66.382	ENSNBRG00000020677	ddx1	97	65.058	Neolamprologus_brichardi
ENSCING00000001176	-	100	65.642	ENSNLEG00000014417	DDX1	100	65.818	Nomascus_leucogenys
ENSCING00000001176	-	98	65.295	ENSMEUG00000008254	DDX1	99	65.158	Notamacropus_eugenii
ENSCING00000001176	-	79	61.538	ENSOPRG00000004290	DDX1	79	61.538	Ochotona_princeps
ENSCING00000001176	-	100	64.439	ENSODEG00000000569	DDX1	100	64.611	Octodon_degus
ENSCING00000001176	-	100	66.400	ENSONIG00000000513	ddx1	100	66.399	Oreochromis_niloticus
ENSCING00000001176	-	75	66.904	ENSOANG00000005450	DDX1	99	66.904	Ornithorhynchus_anatinus
ENSCING00000001176	-	100	65.107	ENSOCUG00000007010	DDX1	100	65.282	Oryctolagus_cuniculus
ENSCING00000001176	-	100	65.688	ENSORLG00000016709	ddx1	100	65.684	Oryzias_latipes
ENSCING00000001176	-	99	65.680	ENSORLG00020003290	ddx1	100	65.676	Oryzias_latipes_hni
ENSCING00000001176	-	100	65.421	ENSORLG00015022438	ddx1	100	65.541	Oryzias_latipes_hsok
ENSCING00000001176	-	100	61.238	ENSOMEG00000017620	ddx1	100	61.238	Oryzias_melastigma
ENSCING00000001176	-	99	65.323	ENSOGAG00000008730	DDX1	100	65.499	Otolemur_garnettii
ENSCING00000001176	-	99	65.369	ENSOARG00000016369	DDX1	100	65.499	Ovis_aries
ENSCING00000001176	-	100	65.374	ENSPPAG00000027432	DDX1	100	65.550	Pan_paniscus
ENSCING00000001176	-	100	65.508	ENSPPRG00000020556	DDX1	100	65.684	Panthera_pardus
ENSCING00000001176	-	100	65.642	ENSPTIG00000008267	DDX1	100	65.818	Panthera_tigris_altaica
ENSCING00000001176	-	100	65.374	ENSPTRG00000011670	DDX1	100	65.550	Pan_troglodytes
ENSCING00000001176	-	100	65.775	ENSPANG00000025185	DDX1	100	65.952	Papio_anubis
ENSCING00000001176	-	100	64.219	ENSPKIG00000012466	ddx1	100	64.324	Paramormyrops_kingsleyae
ENSCING00000001176	-	55	65.037	ENSPSIG00000012292	DDX1	100	64.938	Pelodiscus_sinensis
ENSCING00000001176	-	100	65.188	ENSPMGG00000000782	ddx1	100	65.188	Periophthalmus_magnuspinnatus
ENSCING00000001176	-	100	65.775	ENSPEMG00000016389	Ddx1	100	65.952	Peromyscus_maniculatus_bairdii
ENSCING00000001176	-	99	65.676	ENSPMAG00000009118	-	100	65.541	Petromyzon_marinus
ENSCING00000001176	-	100	66.043	ENSPCIG00000010941	DDX1	100	65.952	Phascolarctos_cinereus
ENSCING00000001176	-	100	66.310	ENSPFOG00000011921	ddx1	100	66.086	Poecilia_formosa
ENSCING00000001176	-	86	65.023	ENSPFOG00000006873	-	100	65.023	Poecilia_formosa
ENSCING00000001176	-	100	66.043	ENSPLAG00000005939	ddx1	100	65.818	Poecilia_latipinna
ENSCING00000001176	-	100	66.444	ENSPMEG00000011140	ddx1	100	66.220	Poecilia_mexicana
ENSCING00000001176	-	100	65.909	ENSPREG00000011751	ddx1	100	65.684	Poecilia_reticulata
ENSCING00000001176	-	100	65.508	ENSPPYG00000012638	DDX1	100	65.684	Pongo_abelii
ENSCING00000001176	-	100	54.412	ENSPCAG00000001491	DDX1	100	54.558	Procavia_capensis
ENSCING00000001176	-	99	64.690	ENSPCOG00000028185	DDX1	99	64.865	Propithecus_coquereli
ENSCING00000001176	-	100	65.241	ENSPVAG00000013618	DDX1	100	65.416	Pteropus_vampyrus
ENSCING00000001176	-	100	66.088	ENSPNYG00000013839	ddx1	100	66.086	Pundamilia_nyererei
ENSCING00000001176	-	89	65.507	ENSPNAG00000017033	ddx1	97	65.507	Pygocentrus_nattereri
ENSCING00000001176	-	100	65.554	ENSRNOG00000006652	Ddx1	100	65.684	Rattus_norvegicus
ENSCING00000001176	-	100	64.706	ENSRBIG00000041664	DDX1	99	67.783	Rhinopithecus_bieti
ENSCING00000001176	-	100	65.374	ENSRROG00000031167	DDX1	100	65.550	Rhinopithecus_roxellana
ENSCING00000001176	-	100	65.508	ENSSBOG00000027577	DDX1	100	65.684	Saimiri_boliviensis_boliviensis
ENSCING00000001176	-	99	61.590	ENSSHAG00000009363	DDX1	99	61.590	Sarcophilus_harrisii
ENSCING00000001176	-	100	65.107	ENSSFOG00015014476	ddx1	100	64.879	Scleropages_formosus
ENSCING00000001176	-	100	66.086	ENSSMAG00000010094	ddx1	100	65.952	Scophthalmus_maximus
ENSCING00000001176	-	100	65.688	ENSSDUG00000012334	ddx1	100	65.684	Seriola_dumerili
ENSCING00000001176	-	100	65.554	ENSSLDG00000025345	ddx1	100	65.550	Seriola_lalandi_dorsalis
ENSCING00000001176	-	99	58.760	ENSSARG00000004536	DDX1	91	68.317	Sorex_araneus
ENSCING00000001176	-	100	65.147	ENSSPUG00000018835	DDX1	100	65.013	Sphenodon_punctatus
ENSCING00000001176	-	100	62.550	ENSSPAG00000023554	ddx1	100	62.534	Stegastes_partitus
ENSCING00000001176	-	100	65.241	ENSSSCG00000008619	DDX1	100	65.416	Sus_scrofa
ENSCING00000001176	-	100	65.733	ENSTGUG00000013096	DDX1	100	65.863	Taeniopygia_guttata
ENSCING00000001176	-	99	65.550	ENSTRUG00000015765	ddx1	99	65.457	Takifugu_rubripes
ENSCING00000001176	-	100	65.416	ENSTNIG00000016309	ddx1	100	65.282	Tetraodon_nigroviridis
ENSCING00000001176	-	99	63.058	ENSTBEG00000008454	DDX1	100	63.058	Tupaia_belangeri
ENSCING00000001176	-	100	65.020	ENSTTRG00000005081	DDX1	100	65.147	Tursiops_truncatus
ENSCING00000001176	-	71	58.349	ENSUAMG00000017375	DDX1	95	58.569	Ursus_americanus
ENSCING00000001176	-	99	65.499	ENSUMAG00000023450	DDX1	100	65.676	Ursus_maritimus
ENSCING00000001176	-	85	69.524	ENSVPAG00000007764	DDX1	85	70.192	Vicugna_pacos
ENSCING00000001176	-	99	65.282	ENSVVUG00000013085	DDX1	96	65.457	Vulpes_vulpes
ENSCING00000001176	-	100	65.818	ENSXETG00000017825	ddx1	100	65.684	Xenopus_tropicalis
ENSCING00000001176	-	100	64.854	ENSXCOG00000007082	ddx1	100	64.628	Xiphophorus_couchianus
ENSCING00000001176	-	100	66.176	ENSXMAG00000004555	ddx1	100	65.952	Xiphophorus_maculatus