EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001244 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4390 bases
Position: chr11:4531452-4535841
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000002422	RRM_5	PF13893.6	8.3e-07	1	1
ENSCINP00000002422	RRM_1	PF00076.22	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000002422	-	703	-	ENSCINP00000002422	158 (aa)	-	F7AEP7

Gene Model

Click here to download ENSCING00000001244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001244's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001244	-	77	64.516	ENSG00000104824	HNRNPL	69	64.516	Homo_sapiens
ENSCING00000001244	-	75	58.824	ENSEBUG00000002973	-	55	58.824	Eptatretus_burgeri
ENSCING00000001244	-	84	61.940	ENSEBUG00000003580	-	52	65.854	Eptatretus_burgeri
ENSCING00000001244	-	60	76.842	ENSFHEG00000017462	-	52	76.842	Fundulus_heteroclitus
ENSCING00000001244	-	77	64.516	ENSGAGG00000008378	-	69	64.516	Gopherus_agassizii
ENSCING00000001244	-	60	78.947	ENSMNEG00000039542	-	61	69.091	Macaca_nemestrina
ENSCING00000001244	-	77	64.516	MGP_CAROLIEiJ_G0029463	Hnrnpl	62	64.516	Mus_caroli
ENSCING00000001244	-	59	40.426	MGP_CAROLIEiJ_G0026063	Ptbp3	64	40.426	Mus_caroli
ENSCING00000001244	-	59	40.426	ENSMUSG00000028382	Ptbp3	64	40.426	Mus_musculus
ENSCING00000001244	-	77	64.516	ENSMUSG00000015165	Hnrnpl	62	64.516	Mus_musculus
ENSCING00000001244	-	59	40.426	MGP_PahariEiJ_G0028401	Ptbp3	64	40.426	Mus_pahari
ENSCING00000001244	-	77	64.516	MGP_PahariEiJ_G0012697	Hnrnpl	62	64.516	Mus_pahari
ENSCING00000001244	-	77	64.516	MGP_SPRETEiJ_G0030559	Hnrnpl	62	64.516	Mus_spretus
ENSCING00000001244	-	59	40.426	MGP_SPRETEiJ_G0027028	Ptbp3	64	40.426	Mus_spretus
ENSCING00000001244	-	63	66.667	ENSNBRG00000024244	HNRNPLL	60	66.667	Neolamprologus_brichardi
ENSCING00000001244	-	63	66.667	ENSPNYG00000009070	-	60	66.667	Pundamilia_nyererei
ENSCING00000001244	-	59	45.745	ENSTNIG00000002060	-	50	42.241	Tetraodon_nigroviridis