EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001275 (Gene tree)
Gene ID: 100179012
Gene Symbol: -
Alias: -
Full Name: elongation factor Ts%2C mitochondrial
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5397 bases
Position: chr9:3515485-3520881
Accession: 100179012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000002472	EF_TS	PF00889.19	3.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000002472	-	1420	-	ENSCINP00000002472	328 (aa)	XP_002129433	F6ZVT2

Gene Model

Click here to download ENSCING00000001275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001275	-	97	32.209	ENSG00000123297	TSFM	100	37.324	Homo_sapiens
ENSCING00000001275	-	88	34.797	ENSAPOG00000014844	tsfm	86	34.797	Acanthochromis_polyacanthus
ENSCING00000001275	-	91	33.117	ENSAMEG00000005452	TSFM	88	33.019	Ailuropoda_melanoleuca
ENSCING00000001275	-	88	34.797	ENSACIG00000001066	tsfm	86	34.797	Amphilophus_citrinellus
ENSCING00000001275	-	88	33.784	ENSAOCG00000007132	tsfm	86	33.784	Amphiprion_ocellaris
ENSCING00000001275	-	88	33.784	ENSAPEG00000015755	tsfm	86	33.784	Amphiprion_percula
ENSCING00000001275	-	89	34.333	ENSATEG00000001497	tsfm	87	34.333	Anabas_testudineus
ENSCING00000001275	-	91	33.442	ENSACAG00000013044	TSFM	86	33.442	Anolis_carolinensis
ENSCING00000001275	-	88	33.221	ENSANAG00000038019	TSFM	86	33.442	Aotus_nancymaae
ENSCING00000001275	-	90	35.099	ENSACLG00000000139	tsfm	88	35.099	Astatotilapia_calliptera
ENSCING00000001275	-	88	33.446	ENSAMXG00000001713	tsfm	87	33.446	Astyanax_mexicanus
ENSCING00000001275	-	90	34.098	ENSBTAG00000016912	TSFM	75	33.438	Bos_taurus
ENSCING00000001275	-	91	30.945	WBGene00010094	tsfm-1	94	30.945	Caenorhabditis_elegans
ENSCING00000001275	-	88	33.557	ENSCJAG00000006600	TSFM	86	33.766	Callithrix_jacchus
ENSCING00000001275	-	91	32.792	ENSCAFG00000000293	-	89	33.019	Canis_familiaris
ENSCING00000001275	-	91	32.792	ENSCAFG00020022844	TSFM	70	33.019	Canis_lupus_dingo
ENSCING00000001275	-	90	34.426	ENSCHIG00000013850	TSFM	97	33.333	Capra_hircus
ENSCING00000001275	-	76	31.518	ENSTSYG00000028892	TSFM	91	31.955	Carlito_syrichta
ENSCING00000001275	-	88	32.886	ENSCPOG00000037732	TSFM	86	33.117	Cavia_porcellus
ENSCING00000001275	-	88	32.886	ENSCCAG00000033254	TSFM	86	33.117	Cebus_capucinus
ENSCING00000001275	-	88	32.886	ENSCATG00000016867	TSFM	86	33.117	Cercocebus_atys
ENSCING00000001275	-	95	32.500	ENSCLAG00000009226	TSFM	93	32.727	Chinchilla_lanigera
ENSCING00000001275	-	88	32.886	ENSCSAG00000004601	TSFM	86	33.117	Chlorocebus_sabaeus
ENSCING00000001275	-	88	31.773	ENSCPBG00000018147	TSFM	83	31.773	Chrysemys_picta_bellii
ENSCING00000001275	-	64	61.611	ENSCSAVG00000007722	-	99	61.611	Ciona_savignyi
ENSCING00000001275	-	75	32.422	ENSCANG00000030298	TSFM	88	32.707	Colobus_angolensis_palliatus
ENSCING00000001275	-	89	33.223	ENSCGRG00001023000	TSFM	84	33.444	Cricetulus_griseus_chok1gshd
ENSCING00000001275	-	89	33.223	ENSCGRG00000006566	TSFM	84	33.444	Cricetulus_griseus_crigri
ENSCING00000001275	-	79	32.453	ENSCSEG00000003376	tsfm	82	32.453	Cynoglossus_semilaevis
ENSCING00000001275	-	88	34.459	ENSCVAG00000001340	tsfm	87	34.459	Cyprinodon_variegatus
ENSCING00000001275	-	89	34.459	ENSDARG00000060748	tsfm	88	34.459	Danio_rerio
ENSCING00000001275	-	88	32.550	ENSDNOG00000049415	TSFM	86	32.468	Dasypus_novemcinctus
ENSCING00000001275	-	78	32.707	ENSDORG00000007272	Tsfm	90	32.707	Dipodomys_ordii
ENSCING00000001275	-	89	30.693	FBgn0032646	mEFTs	86	30.693	Drosophila_melanogaster
ENSCING00000001275	-	91	32.468	ENSETEG00000002686	-	90	32.492	Echinops_telfairi
ENSCING00000001275	-	91	32.792	ENSEASG00005007292	TSFM	70	33.019	Equus_asinus_asinus
ENSCING00000001275	-	91	32.792	ENSECAG00000010520	TSFM	78	33.019	Equus_caballus
ENSCING00000001275	-	86	31.724	ENSELUG00000015481	tsfm	86	31.987	Esox_lucius
ENSCING00000001275	-	92	32.797	ENSFCAG00000023794	TSFM	86	33.117	Felis_catus
ENSCING00000001275	-	99	32.558	ENSFDAG00000016548	TSFM	97	32.558	Fukomys_damarensis
ENSCING00000001275	-	94	32.808	ENSFHEG00000013458	tsfm	90	32.808	Fundulus_heteroclitus
ENSCING00000001275	-	88	34.007	ENSGMOG00000000868	tsfm	92	34.007	Gadus_morhua
ENSCING00000001275	-	94	34.286	ENSGAFG00000021764	tsfm	90	34.286	Gambusia_affinis
ENSCING00000001275	-	88	34.797	ENSGACG00000000697	tsfm	89	34.797	Gasterosteus_aculeatus
ENSCING00000001275	-	90	31.353	ENSGAGG00000020897	TSFM	83	31.353	Gopherus_agassizii
ENSCING00000001275	-	97	32.515	ENSGGOG00000001415	TSFM	93	32.738	Gorilla_gorilla
ENSCING00000001275	-	90	35.430	ENSHBUG00000021738	tsfm	88	35.430	Haplochromis_burtoni
ENSCING00000001275	-	94	33.648	ENSHGLG00000008559	TSFM	88	33.648	Heterocephalus_glaber_female
ENSCING00000001275	-	94	33.648	ENSHGLG00100005643	TSFM	88	33.648	Heterocephalus_glaber_male
ENSCING00000001275	-	89	34.884	ENSHCOG00000021049	tsfm	88	34.884	Hippocampus_comes
ENSCING00000001275	-	90	33.770	ENSSTOG00000001159	TSFM	86	33.550	Ictidomys_tridecemlineatus
ENSCING00000001275	-	95	33.125	ENSJJAG00000012907	Tsfm	90	33.125	Jaculus_jaculus
ENSCING00000001275	-	89	35.235	ENSKMAG00000018906	tsfm	87	35.235	Kryptolebias_marmoratus
ENSCING00000001275	-	91	35.314	ENSLBEG00000019779	tsfm	88	35.314	Labrus_bergylta
ENSCING00000001275	-	91	32.026	ENSLACG00000018125	TSFM	88	32.026	Latimeria_chalumnae
ENSCING00000001275	-	91	33.117	ENSLAFG00000015177	TSFM	86	33.117	Loxodonta_africana
ENSCING00000001275	-	88	32.886	ENSMFAG00000036132	TSFM	86	33.117	Macaca_fascicularis
ENSCING00000001275	-	88	32.886	ENSMMUG00000005893	TSFM	86	33.117	Macaca_mulatta
ENSCING00000001275	-	88	32.886	ENSMNEG00000026351	TSFM	86	33.117	Macaca_nemestrina
ENSCING00000001275	-	88	32.886	ENSMLEG00000029811	TSFM	86	33.117	Mandrillus_leucophaeus
ENSCING00000001275	-	89	34.899	ENSMAMG00000002230	tsfm	89	34.899	Mastacembelus_armatus
ENSCING00000001275	-	90	35.430	ENSMZEG00005008170	tsfm	88	35.430	Maylandia_zebra
ENSCING00000001275	-	88	33.110	ENSMAUG00000011705	Tsfm	84	32.781	Mesocricetus_auratus
ENSCING00000001275	-	96	32.836	ENSMICG00000003812	TSFM	98	33.043	Microcebus_murinus
ENSCING00000001275	-	92	32.581	ENSMOCG00000006104	Tsfm	89	32.808	Microtus_ochrogaster
ENSCING00000001275	-	91	33.003	ENSMMOG00000021854	tsfm	88	33.003	Mola_mola
ENSCING00000001275	-	97	32.000	ENSMODG00000021351	TSFM	90	32.000	Monodelphis_domestica
ENSCING00000001275	-	89	35.906	ENSMALG00000015046	tsfm	87	35.906	Monopterus_albus
ENSCING00000001275	-	91	33.442	MGP_CAROLIEiJ_G0015873	Tsfm	86	33.442	Mus_caroli
ENSCING00000001275	-	91	33.766	ENSMUSG00000040521	Tsfm	86	33.766	Mus_musculus
ENSCING00000001275	-	91	34.091	MGP_PahariEiJ_G0031212	Tsfm	86	34.091	Mus_pahari
ENSCING00000001275	-	91	33.442	MGP_SPRETEiJ_G0016699	Tsfm	86	33.442	Mus_spretus
ENSCING00000001275	-	91	32.792	ENSMPUG00000002051	TSFM	88	32.704	Mustela_putorius_furo
ENSCING00000001275	-	91	33.225	ENSMLUG00000005940	TSFM	90	33.438	Myotis_lucifugus
ENSCING00000001275	-	90	33.443	ENSNGAG00000014356	Tsfm	86	33.225	Nannospalax_galili
ENSCING00000001275	-	90	36.093	ENSNBRG00000016413	tsfm	88	36.093	Neolamprologus_brichardi
ENSCING00000001275	-	97	32.209	ENSNLEG00000017178	TSFM	93	32.440	Nomascus_leucogenys
ENSCING00000001275	-	73	32.584	ENSMEUG00000004047	TSFM	64	32.584	Notamacropus_eugenii
ENSCING00000001275	-	92	33.441	ENSODEG00000001882	TSFM	88	33.648	Octodon_degus
ENSCING00000001275	-	90	32.450	ENSONIG00000019100	tsfm	87	32.450	Oreochromis_niloticus
ENSCING00000001275	-	89	30.606	ENSOCUG00000012512	TSFM	74	30.588	Oryctolagus_cuniculus
ENSCING00000001275	-	88	35.017	ENSORLG00000030201	tsfm	86	35.017	Oryzias_latipes
ENSCING00000001275	-	88	35.354	ENSORLG00020004740	tsfm	86	35.354	Oryzias_latipes_hni
ENSCING00000001275	-	88	35.354	ENSORLG00015022703	tsfm	88	35.354	Oryzias_latipes_hsok
ENSCING00000001275	-	96	33.645	ENSOMEG00000008934	tsfm	90	33.645	Oryzias_melastigma
ENSCING00000001275	-	98	32.523	ENSOGAG00000012235	TSFM	90	32.523	Otolemur_garnettii
ENSCING00000001275	-	90	34.098	ENSOARG00000005095	TSFM	86	33.438	Ovis_aries
ENSCING00000001275	-	97	32.515	ENSPPAG00000043428	TSFM	93	32.738	Pan_paniscus
ENSCING00000001275	-	92	32.797	ENSPPRG00000009667	TSFM	86	33.117	Panthera_pardus
ENSCING00000001275	-	88	32.550	ENSPTIG00000015290	TSFM	86	32.792	Panthera_tigris_altaica
ENSCING00000001275	-	97	32.515	ENSPTRG00000005152	TSFM	93	32.738	Pan_troglodytes
ENSCING00000001275	-	88	32.886	ENSPANG00000007866	TSFM	86	33.117	Papio_anubis
ENSCING00000001275	-	91	33.333	ENSPKIG00000008495	tsfm	86	33.333	Paramormyrops_kingsleyae
ENSCING00000001275	-	69	31.034	ENSPSIG00000015776	TSFM	95	31.034	Pelodiscus_sinensis
ENSCING00000001275	-	94	32.602	ENSPMGG00000007022	tsfm	90	32.602	Periophthalmus_magnuspinnatus
ENSCING00000001275	-	88	32.550	ENSPEMG00000000414	Tsfm	86	32.468	Peromyscus_maniculatus_bairdii
ENSCING00000001275	-	91	32.468	ENSPCIG00000023619	TSFM	88	32.468	Phascolarctos_cinereus
ENSCING00000001275	-	86	34.828	ENSPFOG00000010782	tsfm	90	34.286	Poecilia_formosa
ENSCING00000001275	-	86	34.828	ENSPLAG00000008105	tsfm	90	34.286	Poecilia_latipinna
ENSCING00000001275	-	86	34.828	ENSPMEG00000002567	tsfm	90	34.286	Poecilia_mexicana
ENSCING00000001275	-	86	34.828	ENSPREG00000016696	tsfm	90	34.286	Poecilia_reticulata
ENSCING00000001275	-	97	32.515	ENSPPYG00000004708	TSFM	79	32.738	Pongo_abelii
ENSCING00000001275	-	88	30.195	ENSPCAG00000003789	TSFM	86	30.476	Procavia_capensis
ENSCING00000001275	-	88	32.215	ENSPCOG00000021606	TSFM	86	32.468	Propithecus_coquereli
ENSCING00000001275	-	91	32.680	ENSPVAG00000012141	TSFM	88	32.911	Pteropus_vampyrus
ENSCING00000001275	-	90	35.430	ENSPNYG00000001230	tsfm	88	35.430	Pundamilia_nyererei
ENSCING00000001275	-	97	31.790	ENSPNAG00000003241	tsfm	97	31.790	Pygocentrus_nattereri
ENSCING00000001275	-	66	33.778	ENSRNOG00000048843	Tsfm	69	33.333	Rattus_norvegicus
ENSCING00000001275	-	97	32.209	ENSRBIG00000037278	TSFM	93	32.440	Rhinopithecus_bieti
ENSCING00000001275	-	97	32.209	ENSRROG00000031769	TSFM	93	32.440	Rhinopithecus_roxellana
ENSCING00000001275	-	91	32.248	ENSSHAG00000009664	TSFM	82	32.248	Sarcophilus_harrisii
ENSCING00000001275	-	94	31.962	ENSSFOG00015014457	tsfm	92	31.962	Scleropages_formosus
ENSCING00000001275	-	88	35.473	ENSSMAG00000002467	tsfm	86	35.473	Scophthalmus_maximus
ENSCING00000001275	-	88	34.797	ENSSDUG00000006833	tsfm	86	34.797	Seriola_dumerili
ENSCING00000001275	-	88	34.797	ENSSLDG00000000715	tsfm	86	34.797	Seriola_lalandi_dorsalis
ENSCING00000001275	-	54	30.726	ENSSARG00000000785	-	51	31.551	Sorex_araneus
ENSCING00000001275	-	89	35.452	ENSSPUG00000006435	TSFM	99	35.452	Sphenodon_punctatus
ENSCING00000001275	-	89	34.448	ENSSPAG00000002548	tsfm	87	34.448	Stegastes_partitus
ENSCING00000001275	-	91	33.225	ENSSSCG00000037767	TSFM	75	33.651	Sus_scrofa
ENSCING00000001275	-	88	32.993	ENSTRUG00000003081	tsfm	87	33.333	Takifugu_rubripes
ENSCING00000001275	-	88	34.783	ENSTNIG00000014578	tsfm	87	34.783	Tetraodon_nigroviridis
ENSCING00000001275	-	78	39.474	ENSTBEG00000011603	TSFM	72	39.130	Tupaia_belangeri
ENSCING00000001275	-	94	32.390	ENSTTRG00000008351	TSFM	87	32.390	Tursiops_truncatus
ENSCING00000001275	-	91	33.117	ENSUAMG00000013142	TSFM	88	33.333	Ursus_americanus
ENSCING00000001275	-	91	32.792	ENSUMAG00000020123	TSFM	88	33.019	Ursus_maritimus
ENSCING00000001275	-	74	34.483	ENSVPAG00000000209	TSFM	65	34.483	Vicugna_pacos
ENSCING00000001275	-	90	32.895	ENSVVUG00000016735	TSFM	91	33.121	Vulpes_vulpes
ENSCING00000001275	-	90	33.444	ENSXETG00000009653	tsfm	94	33.444	Xenopus_tropicalis
ENSCING00000001275	-	94	33.651	ENSXMAG00000018468	tsfm	90	33.651	Xiphophorus_maculatus