EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001342 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: splicing factor 3B subunit 3
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 22157 bases
Position: chrHT000125.1:65082-87238
Accession: 100178056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000002626	CPSF_A	PF03178.15	3.4e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000002626	-	4061	XM_009863783	ENSCINP00000002626	1216 (aa)	XP_009862085	A0A1W3JPJ7

Gene Model

Click here to download ENSCING00000001342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001342	-	100	80.788	ENSG00000189091	SF3B3	100	84.722	Homo_sapiens
ENSCING00000001342	-	96	79.693	ENSAPOG00000006172	sf3b3	98	79.693	Acanthochromis_polyacanthus
ENSCING00000001342	-	100	80.672	ENSAMEG00000002187	SF3B3	100	80.672	Ailuropoda_melanoleuca
ENSCING00000001342	-	92	78.125	ENSACIG00000016487	sf3b3	99	78.125	Amphilophus_citrinellus
ENSCING00000001342	-	100	79.967	ENSAOCG00000007158	sf3b3	100	79.967	Amphiprion_ocellaris
ENSCING00000001342	-	100	79.967	ENSAPEG00000022786	sf3b3	100	79.967	Amphiprion_percula
ENSCING00000001342	-	100	79.803	ENSATEG00000013708	sf3b3	100	79.803	Anabas_testudineus
ENSCING00000001342	-	81	80.812	ENSAPLG00000004996	SF3B3	99	80.812	Anas_platyrhynchos
ENSCING00000001342	-	100	80.788	ENSACAG00000001817	SF3B3	100	80.788	Anolis_carolinensis
ENSCING00000001342	-	100	80.788	ENSANAG00000028001	SF3B3	100	80.788	Aotus_nancymaae
ENSCING00000001342	-	96	79.608	ENSACLG00000022555	sf3b3	98	79.608	Astatotilapia_calliptera
ENSCING00000001342	-	100	79.557	ENSAMXG00000003410	sf3b3	100	79.557	Astyanax_mexicanus
ENSCING00000001342	-	100	80.788	ENSBTAG00000010627	SF3B3	100	80.788	Bos_taurus
ENSCING00000001342	-	100	58.828	WBGene00019323	teg-4	100	58.828	Caenorhabditis_elegans
ENSCING00000001342	-	100	80.788	ENSCJAG00000014773	SF3B3	99	80.788	Callithrix_jacchus
ENSCING00000001342	-	100	80.870	ENSCAFG00000020151	SF3B3	100	80.870	Canis_familiaris
ENSCING00000001342	-	100	80.870	ENSCAFG00020020912	SF3B3	100	80.870	Canis_lupus_dingo
ENSCING00000001342	-	100	80.870	ENSCHIG00000019822	SF3B3	100	80.870	Capra_hircus
ENSCING00000001342	-	100	80.788	ENSTSYG00000007910	SF3B3	100	80.788	Carlito_syrichta
ENSCING00000001342	-	84	68.727	ENSCAPG00000001484	SF3B3	92	68.727	Cavia_aperea
ENSCING00000001342	-	100	79.803	ENSCPOG00000000586	SF3B3	100	79.803	Cavia_porcellus
ENSCING00000001342	-	100	80.788	ENSCCAG00000017736	SF3B3	100	80.788	Cebus_capucinus
ENSCING00000001342	-	100	80.788	ENSCATG00000036562	SF3B3	100	80.788	Cercocebus_atys
ENSCING00000001342	-	100	80.788	ENSCLAG00000003921	SF3B3	100	80.788	Chinchilla_lanigera
ENSCING00000001342	-	100	80.788	ENSCSAG00000004371	SF3B3	100	80.788	Chlorocebus_sabaeus
ENSCING00000001342	-	90	80.685	ENSCHOG00000001878	SF3B3	90	80.685	Choloepus_hoffmanni
ENSCING00000001342	-	100	80.952	ENSCPBG00000015853	SF3B3	100	80.952	Chrysemys_picta_bellii
ENSCING00000001342	-	99	94.161	ENSCSAVG00000011454	-	100	94.161	Ciona_savignyi
ENSCING00000001342	-	100	77.586	ENSCANG00000042920	SF3B3	100	77.915	Colobus_angolensis_palliatus
ENSCING00000001342	-	100	80.706	ENSCGRG00001015908	Sf3b3	100	80.706	Cricetulus_griseus_chok1gshd
ENSCING00000001342	-	100	80.706	ENSCGRG00000010180	Sf3b3	100	80.706	Cricetulus_griseus_crigri
ENSCING00000001342	-	81	80.000	ENSCSEG00000014192	sf3b3	98	80.000	Cynoglossus_semilaevis
ENSCING00000001342	-	100	79.721	ENSCVAG00000010459	sf3b3	100	79.721	Cyprinodon_variegatus
ENSCING00000001342	-	100	79.803	ENSDARG00000103553	sf3b3	100	79.803	Danio_rerio
ENSCING00000001342	-	85	80.154	ENSDNOG00000043626	SF3B3	100	80.154	Dasypus_novemcinctus
ENSCING00000001342	-	100	80.788	ENSDORG00000014176	Sf3b3	100	80.788	Dipodomys_ordii
ENSCING00000001342	-	100	71.906	FBgn0035162	Sf3b3	100	71.906	Drosophila_melanogaster
ENSCING00000001342	-	84	89.730	ENSETEG00000002729	SF3B3	84	89.730	Echinops_telfairi
ENSCING00000001342	-	100	77.586	ENSEBUG00000006117	sf3b3	100	77.586	Eptatretus_burgeri
ENSCING00000001342	-	100	80.870	ENSEASG00005013376	SF3B3	100	80.870	Equus_asinus_asinus
ENSCING00000001342	-	100	80.870	ENSECAG00000014053	SF3B3	100	80.870	Equus_caballus
ENSCING00000001342	-	93	85.237	ENSEEUG00000015611	SF3B3	93	85.237	Erinaceus_europaeus
ENSCING00000001342	-	100	77.887	ENSELUG00000015417	sf3b3	100	77.887	Esox_lucius
ENSCING00000001342	-	100	80.870	ENSFCAG00000009487	SF3B3	100	80.870	Felis_catus
ENSCING00000001342	-	100	80.788	ENSFALG00000007372	SF3B3	100	80.788	Ficedula_albicollis
ENSCING00000001342	-	100	80.788	ENSFDAG00000002608	SF3B3	100	80.788	Fukomys_damarensis
ENSCING00000001342	-	100	79.803	ENSFHEG00000017824	sf3b3	100	79.803	Fundulus_heteroclitus
ENSCING00000001342	-	100	76.538	ENSGMOG00000008139	sf3b3	100	76.538	Gadus_morhua
ENSCING00000001342	-	100	80.952	ENSGALG00000002531	SF3B3	100	80.952	Gallus_gallus
ENSCING00000001342	-	100	79.803	ENSGAFG00000015206	sf3b3	100	79.803	Gambusia_affinis
ENSCING00000001342	-	100	79.737	ENSGACG00000002646	sf3b3	100	79.737	Gasterosteus_aculeatus
ENSCING00000001342	-	96	80.887	ENSGAGG00000006746	SF3B3	97	80.887	Gopherus_agassizii
ENSCING00000001342	-	100	80.788	ENSGGOG00000003246	SF3B3	100	80.788	Gorilla_gorilla
ENSCING00000001342	-	92	73.571	ENSHBUG00000005960	sf3b3	99	74.643	Haplochromis_burtoni
ENSCING00000001342	-	100	80.788	ENSHGLG00000010135	SF3B3	100	80.788	Heterocephalus_glaber_female
ENSCING00000001342	-	100	78.930	ENSHGLG00100011148	SF3B3	100	78.930	Heterocephalus_glaber_male
ENSCING00000001342	-	100	79.228	ENSHCOG00000011981	sf3b3	100	79.228	Hippocampus_comes
ENSCING00000001342	-	100	79.557	ENSIPUG00000020435	sf3b3	100	79.557	Ictalurus_punctatus
ENSCING00000001342	-	100	80.788	ENSSTOG00000007065	SF3B3	100	80.788	Ictidomys_tridecemlineatus
ENSCING00000001342	-	100	80.788	ENSJJAG00000003948	Sf3b3	100	80.788	Jaculus_jaculus
ENSCING00000001342	-	100	77.668	ENSKMAG00000004066	sf3b3	99	79.181	Kryptolebias_marmoratus
ENSCING00000001342	-	100	79.721	ENSLBEG00000018302	sf3b3	100	79.721	Labrus_bergylta
ENSCING00000001342	-	98	77.261	ENSLACG00000012501	SF3B3	99	77.261	Latimeria_chalumnae
ENSCING00000001342	-	100	79.984	ENSLOCG00000007566	sf3b3	100	79.984	Lepisosteus_oculatus
ENSCING00000001342	-	100	80.870	ENSLAFG00000012219	SF3B3	100	80.870	Loxodonta_africana
ENSCING00000001342	-	100	80.788	ENSMFAG00000045487	SF3B3	100	80.788	Macaca_fascicularis
ENSCING00000001342	-	100	80.788	ENSMMUG00000017812	SF3B3	100	80.788	Macaca_mulatta
ENSCING00000001342	-	100	80.788	ENSMNEG00000033385	SF3B3	100	80.788	Macaca_nemestrina
ENSCING00000001342	-	100	77.915	ENSMLEG00000043891	SF3B3	100	77.915	Mandrillus_leucophaeus
ENSCING00000001342	-	100	80.049	ENSMAMG00000016837	sf3b3	100	80.049	Mastacembelus_armatus
ENSCING00000001342	-	89	77.726	ENSMZEG00005026015	sf3b3	99	77.726	Maylandia_zebra
ENSCING00000001342	-	100	79.885	ENSMZEG00005010836	sf3b3	100	79.885	Maylandia_zebra
ENSCING00000001342	-	100	80.952	ENSMGAG00000001597	SF3B3	100	80.952	Meleagris_gallopavo
ENSCING00000001342	-	81	67.416	ENSMAUG00000013618	Sf3b3	95	67.541	Mesocricetus_auratus
ENSCING00000001342	-	100	80.000	ENSMICG00000001363	SF3B3	100	80.000	Microcebus_murinus
ENSCING00000001342	-	100	80.706	ENSMOCG00000006108	Sf3b3	100	80.706	Microtus_ochrogaster
ENSCING00000001342	-	89	77.819	ENSMMOG00000002598	sf3b3	97	77.819	Mola_mola
ENSCING00000001342	-	100	77.030	ENSMODG00000014363	SF3B3	100	77.030	Monodelphis_domestica
ENSCING00000001342	-	100	80.131	ENSMALG00000008014	sf3b3	100	80.131	Monopterus_albus
ENSCING00000001342	-	100	80.706	MGP_CAROLIEiJ_G0031563	Sf3b3	100	80.706	Mus_caroli
ENSCING00000001342	-	100	80.706	ENSMUSG00000033732	Sf3b3	100	80.706	Mus_musculus
ENSCING00000001342	-	100	80.706	MGP_SPRETEiJ_G0032681	Sf3b3	100	80.706	Mus_spretus
ENSCING00000001342	-	100	80.870	ENSMPUG00000010277	SF3B3	100	80.870	Mustela_putorius_furo
ENSCING00000001342	-	100	80.788	ENSMLUG00000014607	SF3B3	100	80.788	Myotis_lucifugus
ENSCING00000001342	-	100	80.788	ENSNGAG00000021903	Sf3b3	100	80.788	Nannospalax_galili
ENSCING00000001342	-	84	88.571	ENSNBRG00000007197	sf3b3	99	88.571	Neolamprologus_brichardi
ENSCING00000001342	-	100	79.655	ENSNLEG00000016127	SF3B3	100	79.655	Nomascus_leucogenys
ENSCING00000001342	-	92	78.820	ENSMEUG00000004479	SF3B3	94	78.820	Notamacropus_eugenii
ENSCING00000001342	-	98	78.057	ENSOPRG00000009847	SF3B3	100	78.057	Ochotona_princeps
ENSCING00000001342	-	100	80.788	ENSODEG00000014154	SF3B3	100	80.788	Octodon_degus
ENSCING00000001342	-	100	80.049	ENSONIG00000011198	sf3b3	100	80.049	Oreochromis_niloticus
ENSCING00000001342	-	100	80.788	ENSOANG00000001161	-	100	80.788	Ornithorhynchus_anatinus
ENSCING00000001342	-	100	79.064	ENSOCUG00000004139	SF3B3	100	79.064	Oryctolagus_cuniculus
ENSCING00000001342	-	100	79.721	ENSORLG00000013472	sf3b3	100	79.721	Oryzias_latipes
ENSCING00000001342	-	100	79.721	ENSORLG00020017473	sf3b3	100	79.721	Oryzias_latipes_hni
ENSCING00000001342	-	100	79.721	ENSORLG00015007710	sf3b3	100	79.721	Oryzias_latipes_hsok
ENSCING00000001342	-	100	79.557	ENSOMEG00000014483	sf3b3	100	79.557	Oryzias_melastigma
ENSCING00000001342	-	100	80.508	ENSOGAG00000016051	SF3B3	100	80.508	Otolemur_garnettii
ENSCING00000001342	-	100	80.672	ENSOARG00000004816	SF3B3	100	80.672	Ovis_aries
ENSCING00000001342	-	100	80.788	ENSPPAG00000026807	SF3B3	100	80.788	Pan_paniscus
ENSCING00000001342	-	100	80.870	ENSPPRG00000001686	SF3B3	100	80.870	Panthera_pardus
ENSCING00000001342	-	89	78.585	ENSPTIG00000020382	SF3B3	100	78.585	Panthera_tigris_altaica
ENSCING00000001342	-	100	80.788	ENSPTRG00000008308	SF3B3	100	80.788	Pan_troglodytes
ENSCING00000001342	-	100	80.788	ENSPANG00000024075	SF3B3	100	80.788	Papio_anubis
ENSCING00000001342	-	100	79.228	ENSPKIG00000002712	sf3b3	100	79.228	Paramormyrops_kingsleyae
ENSCING00000001342	-	89	80.515	ENSPSIG00000002232	SF3B3	100	80.515	Pelodiscus_sinensis
ENSCING00000001342	-	100	80.706	ENSPEMG00000008603	Sf3b3	100	80.706	Peromyscus_maniculatus_bairdii
ENSCING00000001342	-	100	79.475	ENSPMAG00000001793	sf3b3	100	79.475	Petromyzon_marinus
ENSCING00000001342	-	100	80.788	ENSPCIG00000014927	SF3B3	100	80.788	Phascolarctos_cinereus
ENSCING00000001342	-	100	79.639	ENSPFOG00000015516	sf3b3	100	79.639	Poecilia_formosa
ENSCING00000001342	-	100	79.639	ENSPLAG00000014330	sf3b3	100	79.639	Poecilia_latipinna
ENSCING00000001342	-	100	79.721	ENSPMEG00000019856	sf3b3	100	79.721	Poecilia_mexicana
ENSCING00000001342	-	81	80.609	ENSPREG00000019669	sf3b3	97	80.609	Poecilia_reticulata
ENSCING00000001342	-	95	83.582	ENSPPYG00000007539	SF3B3	100	83.582	Pongo_abelii
ENSCING00000001342	-	100	63.629	ENSPCAG00000002623	SF3B3	100	63.629	Procavia_capensis
ENSCING00000001342	-	84	89.815	ENSPCOG00000026582	SF3B3	100	89.815	Propithecus_coquereli
ENSCING00000001342	-	100	80.788	ENSPVAG00000000684	SF3B3	100	80.788	Pteropus_vampyrus
ENSCING00000001342	-	100	79.967	ENSPNYG00000003528	sf3b3	100	79.967	Pundamilia_nyererei
ENSCING00000001342	-	100	79.392	ENSPNAG00000015419	sf3b3	100	79.392	Pygocentrus_nattereri
ENSCING00000001342	-	100	80.706	ENSRNOG00000017724	Sf3b3	100	80.706	Rattus_norvegicus
ENSCING00000001342	-	100	80.788	ENSRBIG00000021904	SF3B3	100	80.788	Rhinopithecus_bieti
ENSCING00000001342	-	100	80.788	ENSRROG00000045703	SF3B3	100	80.788	Rhinopithecus_roxellana
ENSCING00000001342	-	100	80.788	ENSSBOG00000029156	SF3B3	100	80.788	Saimiri_boliviensis_boliviensis
ENSCING00000001342	-	100	80.788	ENSSHAG00000000372	SF3B3	100	80.788	Sarcophilus_harrisii
ENSCING00000001342	-	100	79.967	ENSSFOG00015012877	sf3b3	100	79.967	Scleropages_formosus
ENSCING00000001342	-	100	80.049	ENSSMAG00000014386	sf3b3	100	80.049	Scophthalmus_maximus
ENSCING00000001342	-	100	79.967	ENSSDUG00000021201	sf3b3	100	79.967	Seriola_dumerili
ENSCING00000001342	-	100	79.885	ENSSLDG00000017532	sf3b3	100	79.885	Seriola_lalandi_dorsalis
ENSCING00000001342	-	93	84.783	ENSSARG00000006917	SF3B3	93	84.783	Sorex_araneus
ENSCING00000001342	-	100	80.788	ENSSPUG00000006253	SF3B3	100	80.788	Sphenodon_punctatus
ENSCING00000001342	-	100	73.849	ENSSPAG00000003125	sf3b3	100	73.849	Stegastes_partitus
ENSCING00000001342	-	100	80.870	ENSSSCG00000025323	SF3B3	100	80.870	Sus_scrofa
ENSCING00000001342	-	100	80.968	ENSTGUG00000006082	SF3B3	100	80.968	Taeniopygia_guttata
ENSCING00000001342	-	89	79.063	ENSTNIG00000004857	sf3b3	100	79.063	Tetraodon_nigroviridis
ENSCING00000001342	-	93	67.810	ENSTBEG00000002946	SF3B3	100	67.810	Tupaia_belangeri
ENSCING00000001342	-	100	80.213	ENSTTRG00000005855	SF3B3	100	80.213	Tursiops_truncatus
ENSCING00000001342	-	100	80.870	ENSUAMG00000006780	SF3B3	100	80.870	Ursus_americanus
ENSCING00000001342	-	100	80.870	ENSUMAG00000017757	SF3B3	100	80.870	Ursus_maritimus
ENSCING00000001342	-	100	68.227	ENSVPAG00000003202	SF3B3	100	68.227	Vicugna_pacos
ENSCING00000001342	-	100	80.870	ENSVVUG00000017922	SF3B3	100	80.870	Vulpes_vulpes
ENSCING00000001342	-	100	80.131	ENSXETG00000032869	SF3B3	100	80.131	Xenopus_tropicalis
ENSCING00000001342	-	77	80.806	ENSXCOG00000013628	sf3b3	97	80.806	Xiphophorus_couchianus
ENSCING00000001342	-	100	79.803	ENSXMAG00000006334	sf3b3	100	79.803	Xiphophorus_maculatus