EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001525 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 6047 bases
Position: chrHT001231.1:3502-9548
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000003015	Ribonuclease_3	PF00636.26	1.9e-22	1	1
ENSCINP00000003015	Ribonucleas_3_3	PF14622.6	3.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000003015	-	1605	-	ENSCINP00000003015	447 (aa)	-	F6Z457

Gene Model

Click here to download ENSCING00000001525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001525	-	76	65.385	ENSAPOG00000002761	-	64	65.385	Acanthochromis_polyacanthus
ENSCING00000001525	-	98	62.273	ENSACIG00000019308	drosha	50	62.273	Amphilophus_citrinellus
ENSCING00000001525	-	94	62.559	ENSCAFG00000018939	-	78	62.559	Canis_familiaris
ENSCING00000001525	-	99	61.678	ENSCAFG00020017559	DROSHA	71	61.678	Canis_lupus_dingo
ENSCING00000001525	-	73	64.417	ENSCAPG00000015787	-	77	64.417	Cavia_aperea
ENSCING00000001525	-	99	61.678	ENSCCAG00000027283	DROSHA	50	61.678	Cebus_capucinus
ENSCING00000001525	-	99	61.678	ENSCATG00000016833	DROSHA	50	61.678	Cercocebus_atys
ENSCING00000001525	-	100	93.289	ENSCSAVG00000010638	-	63	93.289	Ciona_savignyi
ENSCING00000001525	-	99	61.678	ENSCANG00000035071	DROSHA	50	61.678	Colobus_angolensis_palliatus
ENSCING00000001525	-	98	58.636	ENSEBUG00000005974	-	75	58.636	Eptatretus_burgeri
ENSCING00000001525	-	99	61.678	ENSGGOG00000011006	DROSHA	50	61.678	Gorilla_gorilla
ENSCING00000001525	-	99	61.678	ENSSTOG00000016323	DROSHA	74	64.417	Ictidomys_tridecemlineatus
ENSCING00000001525	-	99	61.678	ENSMMUG00000012193	DROSHA	50	61.678	Macaca_mulatta
ENSCING00000001525	-	99	62.585	ENSMAMG00000012613	drosha	50	62.585	Mastacembelus_armatus
ENSCING00000001525	-	99	59.598	ENSMICG00000002241	DROSHA	50	59.598	Microcebus_murinus
ENSCING00000001525	-	99	61.678	MGP_CAROLIEiJ_G0019687	Drosha	50	61.678	Mus_caroli
ENSCING00000001525	-	99	61.678	MGP_PahariEiJ_G0016063	Drosha	50	61.678	Mus_pahari
ENSCING00000001525	-	99	61.678	MGP_SPRETEiJ_G0020580	Drosha	50	61.678	Mus_spretus
ENSCING00000001525	-	99	61.678	ENSNLEG00000013963	DROSHA	50	61.678	Nomascus_leucogenys
ENSCING00000001525	-	99	43.172	ENSOANG00000015744	-	66	43.172	Ornithorhynchus_anatinus
ENSCING00000001525	-	99	61.905	ENSORLG00015003156	drosha	50	61.905	Oryzias_latipes_hsok
ENSCING00000001525	-	60	64.045	ENSPMGG00000016027	drosha	70	64.045	Periophthalmus_magnuspinnatus
ENSCING00000001525	-	99	61.678	ENSRBIG00000032786	DROSHA	50	60.091	Rhinopithecus_bieti
ENSCING00000001525	-	99	63.039	ENSSDUG00000010944	drosha	50	63.039	Seriola_dumerili
ENSCING00000001525	-	99	63.039	ENSSLDG00000025271	drosha	50	63.039	Seriola_lalandi_dorsalis
ENSCING00000001525	-	99	62.022	ENSTNIG00000008688	drosha	50	62.022	Tetraodon_nigroviridis
ENSCING00000001525	-	99	61.678	ENSUMAG00000014097	DROSHA	70	61.678	Ursus_maritimus
ENSCING00000001525	-	99	61.678	ENSVVUG00000022212	DROSHA	73	61.678	Vulpes_vulpes
ENSCING00000001525	-	60	52.256	ENSXCOG00000015325	drosha	66	52.256	Xiphophorus_couchianus