EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001546 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ATP-dependent RNA helicase DHX8-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3778 bases
Position: chr13:1664137-1667914
Accession: 100177581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000003057	S1	PF00575.23	6.2e-14	1	1
ENSCINP00000003057	DEAD	PF00270.29	1.3e-08	1	1
ENSCINP00000003057	HA2	PF04408.23	1.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000003057	-	3569	-	ENSCINP00000003057	1185 (aa)	XP_009860657	F6YKR9

Gene Model

Click here to download ENSCING00000001546's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001546	-	81	80.809	ENSG00000067596	DHX8	87	90.000	Homo_sapiens
ENSCING00000001546	-	85	77.470	ENSAPOG00000018162	dhx8	99	71.852	Acanthochromis_polyacanthus
ENSCING00000001546	-	81	80.809	ENSAMEG00000018294	DHX8	99	71.934	Ailuropoda_melanoleuca
ENSCING00000001546	-	100	71.429	ENSACIG00000013170	dhx8	99	72.460	Amphilophus_citrinellus
ENSCING00000001546	-	90	77.157	ENSAOCG00000006439	dhx8	91	80.829	Amphiprion_ocellaris
ENSCING00000001546	-	100	71.784	ENSAPEG00000005641	dhx8	99	72.172	Amphiprion_percula
ENSCING00000001546	-	89	77.944	ENSATEG00000007660	dhx8	91	80.725	Anabas_testudineus
ENSCING00000001546	-	81	80.290	ENSAPLG00000002788	DHX8	78	81.017	Anas_platyrhynchos
ENSCING00000001546	-	100	72.218	ENSACAG00000013509	DHX8	99	72.342	Anolis_carolinensis
ENSCING00000001546	-	86	80.913	ENSANAG00000030580	DHX8	98	72.757	Aotus_nancymaae
ENSCING00000001546	-	88	78.693	ENSACLG00000024759	dhx8	90	80.933	Astatotilapia_calliptera
ENSCING00000001546	-	99	72.773	ENSAMXG00000009430	dhx8	91	81.017	Astyanax_mexicanus
ENSCING00000001546	-	81	80.809	ENSBTAG00000008339	DHX8	98	72.599	Bos_taurus
ENSCING00000001546	-	80	65.738	WBGene00003393	mog-5	99	58.450	Caenorhabditis_elegans
ENSCING00000001546	-	85	80.818	ENSCJAG00000010659	-	98	72.757	Callithrix_jacchus
ENSCING00000001546	-	81	80.809	ENSCAFG00000014556	DHX8	98	72.841	Canis_familiaris
ENSCING00000001546	-	81	80.809	ENSCAFG00020012922	DHX8	100	73.322	Canis_lupus_dingo
ENSCING00000001546	-	81	80.809	ENSCHIG00000009291	DHX8	98	72.924	Capra_hircus
ENSCING00000001546	-	94	71.858	ENSTSYG00000008782	DHX8	98	72.795	Carlito_syrichta
ENSCING00000001546	-	81	80.394	ENSCAPG00000005701	DHX8	98	72.387	Cavia_aperea
ENSCING00000001546	-	81	80.248	ENSCPOG00000000224	DHX8	98	72.825	Cavia_porcellus
ENSCING00000001546	-	86	80.749	ENSCCAG00000021748	DHX8	98	72.757	Cebus_capucinus
ENSCING00000001546	-	99	71.215	ENSCATG00000043128	DHX8	98	71.983	Cercocebus_atys
ENSCING00000001546	-	83	78.990	ENSCLAG00000016045	DHX8	98	72.268	Chinchilla_lanigera
ENSCING00000001546	-	81	80.394	ENSCSAG00000003443	DHX8	98	71.464	Chlorocebus_sabaeus
ENSCING00000001546	-	94	79.094	ENSCHOG00000009720	DHX8	93	79.094	Choloepus_hoffmanni
ENSCING00000001546	-	99	72.552	ENSCPBG00000016252	DHX8	99	72.781	Chrysemys_picta_bellii
ENSCING00000001546	-	85	93.015	ENSCSAVG00000002918	-	93	93.450	Ciona_savignyi
ENSCING00000001546	-	84	87.500	ENSCANG00000031479	DHX8	86	87.500	Colobus_angolensis_palliatus
ENSCING00000001546	-	81	80.705	ENSCGRG00001021413	Dhx8	98	71.803	Cricetulus_griseus_chok1gshd
ENSCING00000001546	-	100	68.668	ENSCSEG00000015029	dhx8	99	72.007	Cynoglossus_semilaevis
ENSCING00000001546	-	89	78.144	ENSCVAG00000006188	dhx8	91	80.829	Cyprinodon_variegatus
ENSCING00000001546	-	81	80.187	ENSDARG00000054707	dhx8	99	71.960	Danio_rerio
ENSCING00000001546	-	81	80.435	ENSDNOG00000013606	DHX8	98	71.569	Dasypus_novemcinctus
ENSCING00000001546	-	99	67.813	ENSDORG00000013845	Dhx8	98	69.396	Dipodomys_ordii
ENSCING00000001546	-	58	88.333	ENSETEG00000010986	DHX8	76	88.333	Echinops_telfairi
ENSCING00000001546	-	94	64.987	ENSEBUG00000001680	dhx8	97	65.565	Eptatretus_burgeri
ENSCING00000001546	-	81	80.809	ENSEASG00005010097	DHX8	98	72.277	Equus_asinus_asinus
ENSCING00000001546	-	81	80.809	ENSECAG00000019601	DHX8	98	71.793	Equus_caballus
ENSCING00000001546	-	71	88.269	ENSEEUG00000004835	-	69	88.269	Erinaceus_europaeus
ENSCING00000001546	-	99	71.668	ENSELUG00000007955	dhx8	99	72.583	Esox_lucius
ENSCING00000001546	-	81	80.809	ENSFCAG00000009908	DHX8	98	72.314	Felis_catus
ENSCING00000001546	-	94	72.533	ENSFALG00000000810	DHX8	100	73.619	Ficedula_albicollis
ENSCING00000001546	-	99	71.382	ENSFDAG00000017832	-	79	80.972	Fukomys_damarensis
ENSCING00000001546	-	95	78.693	ENSFHEG00000012389	dhx8	99	72.053	Fundulus_heteroclitus
ENSCING00000001546	-	82	84.366	ENSGMOG00000016045	dhx8	83	84.366	Gadus_morhua
ENSCING00000001546	-	95	77.956	ENSGMOG00000016093	dhx8	92	79.979	Gadus_morhua
ENSCING00000001546	-	93	70.234	ENSGALG00000032305	DHX8	99	71.765	Gallus_gallus
ENSCING00000001546	-	100	72.162	ENSGAFG00000012510	dhx8	98	71.896	Gambusia_affinis
ENSCING00000001546	-	100	71.488	ENSGACG00000003750	dhx8	100	71.358	Gasterosteus_aculeatus
ENSCING00000001546	-	97	68.143	ENSGACG00000003736	dhx8	100	67.483	Gasterosteus_aculeatus
ENSCING00000001546	-	99	72.515	ENSGAGG00000024323	DHX8	99	72.842	Gopherus_agassizii
ENSCING00000001546	-	99	71.335	ENSGGOG00000000143	DHX8	98	72.268	Gorilla_gorilla
ENSCING00000001546	-	88	78.693	ENSHBUG00000005644	dhx8	99	72.076	Haplochromis_burtoni
ENSCING00000001546	-	99	70.130	ENSHGLG00000011583	-	98	71.841	Heterocephalus_glaber_female
ENSCING00000001546	-	99	70.049	ENSHGLG00100000532	-	98	71.759	Heterocephalus_glaber_male
ENSCING00000001546	-	81	79.793	ENSHCOG00000016177	dhx8	99	72.342	Hippocampus_comes
ENSCING00000001546	-	81	80.394	ENSIPUG00000019179	dhx8	99	72.750	Ictalurus_punctatus
ENSCING00000001546	-	81	80.705	ENSSTOG00000013747	DHX8	98	72.457	Ictidomys_tridecemlineatus
ENSCING00000001546	-	95	72.121	ENSJJAG00000017249	Dhx8	97	72.411	Jaculus_jaculus
ENSCING00000001546	-	83	78.593	ENSKMAG00000005568	dhx8	99	72.062	Kryptolebias_marmoratus
ENSCING00000001546	-	99	68.543	ENSLBEG00000011490	dhx8	99	67.954	Labrus_bergylta
ENSCING00000001546	-	83	77.241	ENSLBEG00000012048	dhx8	99	71.774	Labrus_bergylta
ENSCING00000001546	-	100	72.190	ENSLACG00000001765	DHX8	99	72.849	Latimeria_chalumnae
ENSCING00000001546	-	81	80.602	ENSLOCG00000012147	dhx8	99	73.256	Lepisosteus_oculatus
ENSCING00000001546	-	97	70.257	ENSLAFG00000022159	DHX8	100	70.475	Loxodonta_africana
ENSCING00000001546	-	99	71.963	ENSMFAG00000044651	DHX8	98	72.538	Macaca_fascicularis
ENSCING00000001546	-	99	72.236	ENSMMUG00000012071	DHX8	98	72.795	Macaca_mulatta
ENSCING00000001546	-	84	87.500	ENSMNEG00000033786	DHX8	98	71.464	Macaca_nemestrina
ENSCING00000001546	-	75	81.982	ENSMLEG00000006176	DHX8	98	81.982	Mandrillus_leucophaeus
ENSCING00000001546	-	100	71.970	ENSMAMG00000006195	dhx8	99	72.360	Mastacembelus_armatus
ENSCING00000001546	-	88	78.693	ENSMZEG00005007559	dhx8	99	72.076	Maylandia_zebra
ENSCING00000001546	-	79	79.745	ENSMGAG00000002343	DHX8	99	70.075	Meleagris_gallopavo
ENSCING00000001546	-	86	80.705	ENSMICG00000009509	DHX8	98	72.066	Microcebus_murinus
ENSCING00000001546	-	81	80.705	ENSMOCG00000008962	Dhx8	98	72.066	Microtus_ochrogaster
ENSCING00000001546	-	69	78.922	ENSMMOG00000000567	dhx8	100	79.902	Mola_mola
ENSCING00000001546	-	83	78.449	ENSMMOG00000000596	dhx8	89	80.622	Mola_mola
ENSCING00000001546	-	81	80.498	ENSMODG00000015181	DHX8	99	72.910	Monodelphis_domestica
ENSCING00000001546	-	83	76.382	ENSMALG00000013129	dhx8	99	70.569	Monopterus_albus
ENSCING00000001546	-	81	80.705	MGP_CAROLIEiJ_G0017228	Dhx8	78	81.432	Mus_caroli
ENSCING00000001546	-	81	80.705	ENSMUSG00000034931	Dhx8	77	81.432	Mus_musculus
ENSCING00000001546	-	81	80.705	MGP_PahariEiJ_G0018358	Dhx8	77	81.432	Mus_pahari
ENSCING00000001546	-	81	90.000	MGP_SPRETEiJ_G0018071	Dhx8	92	90.000	Mus_spretus
ENSCING00000001546	-	81	80.809	ENSMPUG00000009717	DHX8	98	72.314	Mustela_putorius_furo
ENSCING00000001546	-	81	78.364	ENSMLUG00000000090	DHX8	97	69.975	Myotis_lucifugus
ENSCING00000001546	-	81	80.705	ENSNGAG00000023993	Dhx8	98	72.374	Nannospalax_galili
ENSCING00000001546	-	88	78.693	ENSNBRG00000023205	dhx8	99	71.993	Neolamprologus_brichardi
ENSCING00000001546	-	88	80.514	ENSMEUG00000016093	DHX8	91	81.263	Notamacropus_eugenii
ENSCING00000001546	-	71	78.154	ENSOPRG00000014865	DHX8	88	78.154	Ochotona_princeps
ENSCING00000001546	-	81	80.248	ENSODEG00000018025	DHX8	98	72.135	Octodon_degus
ENSCING00000001546	-	83	78.894	ENSONIG00000018248	dhx8	99	72.488	Oreochromis_niloticus
ENSCING00000001546	-	55	81.044	ENSOANG00000003160	-	79	81.044	Ornithorhynchus_anatinus
ENSCING00000001546	-	78	80.451	ENSOCUG00000008014	DHX8	98	72.133	Oryctolagus_cuniculus
ENSCING00000001546	-	100	72.296	ENSORLG00000011951	dhx8	79	80.682	Oryzias_latipes
ENSCING00000001546	-	85	77.569	ENSORLG00020022333	dhx8	97	72.241	Oryzias_latipes_hni
ENSCING00000001546	-	83	78.343	ENSORLG00015021793	dhx8	97	72.286	Oryzias_latipes_hsok
ENSCING00000001546	-	88	76.787	ENSOMEG00000004222	dhx8	99	72.231	Oryzias_melastigma
ENSCING00000001546	-	81	79.149	ENSOGAG00000010418	DHX8	98	70.899	Otolemur_garnettii
ENSCING00000001546	-	81	80.809	ENSOARG00000005409	DHX8	97	72.924	Ovis_aries
ENSCING00000001546	-	86	80.809	ENSPPAG00000042508	DHX8	98	72.517	Pan_paniscus
ENSCING00000001546	-	81	80.809	ENSPPRG00000003753	DHX8	98	72.314	Panthera_pardus
ENSCING00000001546	-	81	80.809	ENSPTIG00000008944	DHX8	98	72.314	Panthera_tigris_altaica
ENSCING00000001546	-	86	80.809	ENSPTRG00000009246	DHX8	98	72.517	Pan_troglodytes
ENSCING00000001546	-	99	71.155	ENSPANG00000021364	DHX8	98	72.076	Papio_anubis
ENSCING00000001546	-	86	80.394	ENSPKIG00000001290	dhx8	99	72.419	Paramormyrops_kingsleyae
ENSCING00000001546	-	94	73.084	ENSPSIG00000005550	DHX8	100	73.351	Pelodiscus_sinensis
ENSCING00000001546	-	81	80.311	ENSPMGG00000019078	dhx8	99	73.067	Periophthalmus_magnuspinnatus
ENSCING00000001546	-	99	72.333	ENSPEMG00000012654	Dhx8	98	73.255	Peromyscus_maniculatus_bairdii
ENSCING00000001546	-	64	85.469	ENSPMAG00000001726	dhx8	100	85.469	Petromyzon_marinus
ENSCING00000001546	-	99	72.324	ENSPCIG00000030254	DHX8	99	72.993	Phascolarctos_cinereus
ENSCING00000001546	-	83	78.614	ENSPFOG00000017661	dhx8	97	71.323	Poecilia_formosa
ENSCING00000001546	-	83	78.614	ENSPLAG00000011548	dhx8	97	71.323	Poecilia_latipinna
ENSCING00000001546	-	82	78.586	ENSPMEG00000008166	dhx8	97	70.878	Poecilia_mexicana
ENSCING00000001546	-	83	78.492	ENSPREG00000011752	dhx8	97	70.997	Poecilia_reticulata
ENSCING00000001546	-	81	80.809	ENSPPYG00000008357	DHX8	98	72.517	Pongo_abelii
ENSCING00000001546	-	87	89.596	ENSPCAG00000015519	DHX8	85	89.596	Procavia_capensis
ENSCING00000001546	-	81	80.705	ENSPVAG00000014872	DHX8	98	72.020	Pteropus_vampyrus
ENSCING00000001546	-	83	78.693	ENSPNYG00000001365	dhx8	99	72.076	Pundamilia_nyererei
ENSCING00000001546	-	81	80.394	ENSPNAG00000008427	dhx8	99	72.705	Pygocentrus_nattereri
ENSCING00000001546	-	81	80.705	ENSRNOG00000020772	Dhx8	77	81.432	Rattus_norvegicus
ENSCING00000001546	-	81	79.668	ENSRBIG00000039031	DHX8	100	89.320	Rhinopithecus_bieti
ENSCING00000001546	-	81	80.705	ENSRROG00000036032	DHX8	98	72.268	Rhinopithecus_roxellana
ENSCING00000001546	-	81	48.687	YER013W	-	84	48.586	Saccharomyces_cerevisiae
ENSCING00000001546	-	86	80.913	ENSSBOG00000031719	DHX8	98	72.757	Saimiri_boliviensis_boliviensis
ENSCING00000001546	-	99	72.107	ENSSHAG00000009871	DHX8	99	72.932	Sarcophilus_harrisii
ENSCING00000001546	-	81	79.979	ENSSFOG00015024187	dhx8	99	73.138	Scleropages_formosus
ENSCING00000001546	-	94	73.033	ENSSMAG00000008607	dhx8	100	72.606	Scophthalmus_maximus
ENSCING00000001546	-	99	67.577	ENSSMAG00000008522	dhx8	85	76.349	Scophthalmus_maximus
ENSCING00000001546	-	88	77.545	ENSSDUG00000010774	dhx8	99	71.534	Seriola_dumerili
ENSCING00000001546	-	100	68.129	ENSSDUG00000010822	dhx8	99	68.896	Seriola_dumerili
ENSCING00000001546	-	99	66.998	ENSSLDG00000023277	dhx8	99	67.782	Seriola_lalandi_dorsalis
ENSCING00000001546	-	90	78.144	ENSSLDG00000023594	dhx8	90	80.829	Seriola_lalandi_dorsalis
ENSCING00000001546	-	78	87.879	ENSSARG00000007300	DHX8	76	87.879	Sorex_araneus
ENSCING00000001546	-	99	72.582	ENSSPUG00000004382	DHX8	99	73.087	Sphenodon_punctatus
ENSCING00000001546	-	81	80.685	ENSSSCG00000017378	DHX8	98	72.750	Sus_scrofa
ENSCING00000001546	-	81	80.374	ENSTGUG00000002881	DHX8	99	71.429	Taeniopygia_guttata
ENSCING00000001546	-	59	60.338	ENSTRUG00000002454	-	75	70.764	Takifugu_rubripes
ENSCING00000001546	-	99	68.605	ENSTRUG00000004063	dhx8	81	77.812	Takifugu_rubripes
ENSCING00000001546	-	99	68.598	ENSTNIG00000002771	dhx8	80	77.651	Tetraodon_nigroviridis
ENSCING00000001546	-	79	88.377	ENSTBEG00000012089	DHX8	78	88.377	Tupaia_belangeri
ENSCING00000001546	-	81	78.423	ENSTTRG00000016056	DHX8	98	70.799	Tursiops_truncatus
ENSCING00000001546	-	99	72.819	ENSUAMG00000018121	DHX8	99	73.022	Ursus_americanus
ENSCING00000001546	-	81	80.809	ENSUMAG00000012797	DHX8	100	73.233	Ursus_maritimus
ENSCING00000001546	-	71	87.258	ENSVPAG00000004605	DHX8	73	87.258	Vicugna_pacos
ENSCING00000001546	-	81	80.809	ENSVVUG00000017409	DHX8	95	72.841	Vulpes_vulpes
ENSCING00000001546	-	100	68.529	ENSXETG00000013672	dhx8	78	76.739	Xenopus_tropicalis
ENSCING00000001546	-	83	78.257	ENSXCOG00000003866	dhx8	80	80.579	Xiphophorus_couchianus
ENSCING00000001546	-	83	78.492	ENSXMAG00000017907	dhx8	79	80.829	Xiphophorus_maculatus