EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001688 (Gene tree)
Gene ID: 100178722
Gene Symbol: -
Alias: -
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 8108 bases
Position: chr12:634766-642873
Accession: 100178722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000003425	ResIII	PF04851.15	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000003425	-	2375	XM_002130388	ENSCINP00000003425	663 (aa)	XP_002130424	F6UJS3

Gene Model

Click here to download ENSCING00000001688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001688's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001688	-	99	49.775	ENSG00000163104	SMARCAD1	100	50.415	Homo_sapiens
ENSCING00000001688	-	98	50.303	ENSAPOG00000011446	smarcad1a	61	50.303	Acanthochromis_polyacanthus
ENSCING00000001688	-	99	49.775	ENSAMEG00000005844	SMARCAD1	64	49.775	Ailuropoda_melanoleuca
ENSCING00000001688	-	96	50.390	ENSACIG00000018326	smarcad1a	88	50.390	Amphilophus_citrinellus
ENSCING00000001688	-	98	50.455	ENSAOCG00000019762	smarcad1a	61	50.455	Amphiprion_ocellaris
ENSCING00000001688	-	98	50.606	ENSAPEG00000003889	smarcad1a	61	50.606	Amphiprion_percula
ENSCING00000001688	-	96	50.938	ENSATEG00000015608	smarcad1a	62	50.938	Anabas_testudineus
ENSCING00000001688	-	99	49.477	ENSAPLG00000004630	SMARCAD1	69	49.776	Anas_platyrhynchos
ENSCING00000001688	-	99	50.225	ENSACAG00000013554	SMARCAD1	64	50.225	Anolis_carolinensis
ENSCING00000001688	-	99	49.925	ENSANAG00000020488	SMARCAD1	72	49.850	Aotus_nancymaae
ENSCING00000001688	-	98	49.094	ENSACLG00000017063	smarcad1a	64	49.094	Astatotilapia_calliptera
ENSCING00000001688	-	99	48.187	ENSAMXG00000015470	smarcad1a	91	48.407	Astyanax_mexicanus
ENSCING00000001688	-	97	50.619	ENSAMXG00000019130	smarcad1b	70	50.076	Astyanax_mexicanus
ENSCING00000001688	-	99	49.475	ENSBTAG00000017061	SMARCAD1	64	49.475	Bos_taurus
ENSCING00000001688	-	98	40.752	WBGene00010845	M03C11.8	65	40.752	Caenorhabditis_elegans
ENSCING00000001688	-	99	49.700	ENSCJAG00000006778	SMARCAD1	64	49.700	Callithrix_jacchus
ENSCING00000001688	-	99	50.000	ENSCAFG00000010026	SMARCAD1	64	50.000	Canis_familiaris
ENSCING00000001688	-	99	50.000	ENSCAFG00020003994	SMARCAD1	74	50.000	Canis_lupus_dingo
ENSCING00000001688	-	99	49.399	ENSCHIG00000012905	SMARCAD1	64	49.399	Capra_hircus
ENSCING00000001688	-	99	49.775	ENSTSYG00000002706	SMARCAD1	64	49.775	Carlito_syrichta
ENSCING00000001688	-	97	46.894	ENSCAPG00000016744	SMARCAD1	69	46.739	Cavia_aperea
ENSCING00000001688	-	99	50.000	ENSCPOG00000011398	SMARCAD1	64	50.000	Cavia_porcellus
ENSCING00000001688	-	99	49.700	ENSCCAG00000022264	SMARCAD1	100	50.415	Cebus_capucinus
ENSCING00000001688	-	99	49.700	ENSCATG00000035663	SMARCAD1	74	49.700	Cercocebus_atys
ENSCING00000001688	-	99	49.700	ENSCSAG00000004186	SMARCAD1	78	49.700	Chlorocebus_sabaeus
ENSCING00000001688	-	99	50.448	ENSCPBG00000013203	SMARCAD1	64	50.448	Chrysemys_picta_bellii
ENSCING00000001688	-	99	49.700	ENSCANG00000003556	SMARCAD1	100	50.415	Colobus_angolensis_palliatus
ENSCING00000001688	-	99	49.700	ENSCGRG00001015056	Smarcad1	64	49.700	Cricetulus_griseus_chok1gshd
ENSCING00000001688	-	99	49.700	ENSCGRG00000014087	Smarcad1	64	49.700	Cricetulus_griseus_crigri
ENSCING00000001688	-	99	49.701	ENSCSEG00000014419	-	66	49.701	Cynoglossus_semilaevis
ENSCING00000001688	-	97	50.464	ENSCSEG00000017903	smarcad1a	60	50.619	Cynoglossus_semilaevis
ENSCING00000001688	-	94	49.120	ENSDARG00000014041	smarcad1a	67	48.042	Danio_rerio
ENSCING00000001688	-	99	49.014	ENSDARG00000073721	smarcad1b	68	49.014	Danio_rerio
ENSCING00000001688	-	99	49.925	ENSDNOG00000000806	-	64	49.925	Dasypus_novemcinctus
ENSCING00000001688	-	99	49.925	ENSDORG00000012331	Smarcad1	64	49.925	Dipodomys_ordii
ENSCING00000001688	-	95	44.044	FBgn0032157	Etl1	76	43.854	Drosophila_melanogaster
ENSCING00000001688	-	99	41.945	ENSEBUG00000003969	smarcad1a	97	42.516	Eptatretus_burgeri
ENSCING00000001688	-	99	49.775	ENSEASG00005012382	SMARCAD1	74	49.028	Equus_asinus_asinus
ENSCING00000001688	-	99	49.775	ENSECAG00000011562	SMARCAD1	64	49.775	Equus_caballus
ENSCING00000001688	-	97	48.466	ENSELUG00000019154	smarcad1b	65	48.466	Esox_lucius
ENSCING00000001688	-	98	48.722	ENSELUG00000018535	smarcad1a	64	48.722	Esox_lucius
ENSCING00000001688	-	99	49.775	ENSFCAG00000003958	SMARCAD1	100	50.249	Felis_catus
ENSCING00000001688	-	99	49.925	ENSFALG00000006089	SMARCAD1	64	49.925	Ficedula_albicollis
ENSCING00000001688	-	99	49.850	ENSFDAG00000017027	SMARCAD1	64	49.850	Fukomys_damarensis
ENSCING00000001688	-	98	49.319	ENSFHEG00000012778	smarcad1a	60	49.319	Fundulus_heteroclitus
ENSCING00000001688	-	97	48.686	ENSGMOG00000018995	smarcad1a	77	47.845	Gadus_morhua
ENSCING00000001688	-	97	49.228	ENSGALG00000037339	SMARCAD1	77	49.228	Gallus_gallus
ENSCING00000001688	-	97	49.538	ENSGAFG00000013498	smarcad1a	61	49.538	Gambusia_affinis
ENSCING00000001688	-	98	50.000	ENSGACG00000007327	smarcad1a	76	49.851	Gasterosteus_aculeatus
ENSCING00000001688	-	99	50.746	ENSGAGG00000008582	SMARCAD1	64	50.746	Gopherus_agassizii
ENSCING00000001688	-	99	49.700	ENSGGOG00000023001	SMARCAD1	64	49.700	Gorilla_gorilla
ENSCING00000001688	-	98	49.094	ENSHBUG00000011042	smarcad1a	62	49.094	Haplochromis_burtoni
ENSCING00000001688	-	99	49.850	ENSHGLG00000005070	SMARCAD1	64	49.850	Heterocephalus_glaber_female
ENSCING00000001688	-	99	49.850	ENSHGLG00100006812	SMARCAD1	64	49.850	Heterocephalus_glaber_male
ENSCING00000001688	-	97	48.607	ENSHCOG00000007848	smarcad1a	59	48.476	Hippocampus_comes
ENSCING00000001688	-	96	48.910	ENSIPUG00000000242	smarcad1a	66	48.407	Ictalurus_punctatus
ENSCING00000001688	-	99	50.683	ENSIPUG00000022817	smarcad1b	70	50.683	Ictalurus_punctatus
ENSCING00000001688	-	99	49.775	ENSSTOG00000001227	SMARCAD1	64	49.775	Ictidomys_tridecemlineatus
ENSCING00000001688	-	99	49.850	ENSJJAG00000022342	Smarcad1	64	49.850	Jaculus_jaculus
ENSCING00000001688	-	95	51.024	ENSKMAG00000021351	smarcad1a	59	51.024	Kryptolebias_marmoratus
ENSCING00000001688	-	99	50.227	ENSLBEG00000008088	smarcad1a	62	50.227	Labrus_bergylta
ENSCING00000001688	-	99	51.657	ENSLOCG00000012909	smarcad1a	67	51.657	Lepisosteus_oculatus
ENSCING00000001688	-	99	48.348	ENSLAFG00000000040	SMARCAD1	64	48.348	Loxodonta_africana
ENSCING00000001688	-	99	49.700	ENSMFAG00000042606	SMARCAD1	74	49.700	Macaca_fascicularis
ENSCING00000001688	-	99	49.700	ENSMMUG00000022242	SMARCAD1	74	49.700	Macaca_mulatta
ENSCING00000001688	-	99	49.700	ENSMNEG00000038117	SMARCAD1	100	50.415	Macaca_nemestrina
ENSCING00000001688	-	99	49.700	ENSMLEG00000038333	SMARCAD1	100	50.415	Mandrillus_leucophaeus
ENSCING00000001688	-	98	50.305	ENSMAMG00000000933	smarcad1a	62	50.305	Mastacembelus_armatus
ENSCING00000001688	-	98	49.094	ENSMZEG00005005203	smarcad1a	64	49.094	Maylandia_zebra
ENSCING00000001688	-	91	49.346	ENSMGAG00000005577	SMARCAD1	63	49.346	Meleagris_gallopavo
ENSCING00000001688	-	99	49.399	ENSMAUG00000008417	Smarcad1	64	49.399	Mesocricetus_auratus
ENSCING00000001688	-	99	50.075	ENSMICG00000009746	SMARCAD1	64	50.075	Microcebus_murinus
ENSCING00000001688	-	99	49.249	ENSMOCG00000017142	Smarcad1	64	49.249	Microtus_ochrogaster
ENSCING00000001688	-	98	51.735	ENSMMOG00000000275	smarcad1a	92	50.673	Mola_mola
ENSCING00000001688	-	99	49.700	ENSMODG00000019268	SMARCAD1	64	49.700	Monodelphis_domestica
ENSCING00000001688	-	99	49.399	MGP_CAROLIEiJ_G0028458	-	52	49.399	Mus_caroli
ENSCING00000001688	-	99	49.399	ENSMUSG00000029920	Smarcad1	64	49.399	Mus_musculus
ENSCING00000001688	-	99	49.399	MGP_PahariEiJ_G0022198	Smarcad1	64	49.399	Mus_pahari
ENSCING00000001688	-	99	49.399	MGP_SPRETEiJ_G0029462	Smarcad1	64	49.399	Mus_spretus
ENSCING00000001688	-	99	49.700	ENSMPUG00000002111	SMARCAD1	64	49.700	Mustela_putorius_furo
ENSCING00000001688	-	99	49.175	ENSMLUG00000000425	SMARCAD1	64	49.175	Myotis_lucifugus
ENSCING00000001688	-	99	49.249	ENSNGAG00000000810	Smarcad1	65	49.249	Nannospalax_galili
ENSCING00000001688	-	95	49.604	ENSNBRG00000012749	smarcad1a	74	49.604	Neolamprologus_brichardi
ENSCING00000001688	-	99	49.700	ENSNLEG00000014225	SMARCAD1	100	50.415	Nomascus_leucogenys
ENSCING00000001688	-	99	49.850	ENSODEG00000004334	SMARCAD1	64	49.850	Octodon_degus
ENSCING00000001688	-	97	49.309	ENSONIG00000015059	smarcad1a	68	49.028	Oreochromis_niloticus
ENSCING00000001688	-	99	50.675	ENSOANG00000013764	SMARCAD1	79	50.675	Ornithorhynchus_anatinus
ENSCING00000001688	-	99	49.700	ENSOCUG00000017283	SMARCAD1	64	49.700	Oryctolagus_cuniculus
ENSCING00000001688	-	99	49.242	ENSORLG00000004869	smarcad1a	62	49.242	Oryzias_latipes
ENSCING00000001688	-	99	49.472	ENSORLG00020020569	smarcad1a	62	49.242	Oryzias_latipes_hni
ENSCING00000001688	-	99	49.472	ENSORLG00015009045	smarcad1a	62	49.242	Oryzias_latipes_hsok
ENSCING00000001688	-	99	48.943	ENSOMEG00000023032	smarcad1a	62	48.943	Oryzias_melastigma
ENSCING00000001688	-	99	49.925	ENSOGAG00000011444	SMARCAD1	64	49.925	Otolemur_garnettii
ENSCING00000001688	-	99	49.399	ENSOARG00000017851	SMARCAD1	64	49.399	Ovis_aries
ENSCING00000001688	-	99	49.700	ENSPPAG00000035715	SMARCAD1	64	49.700	Pan_paniscus
ENSCING00000001688	-	99	49.775	ENSPPRG00000024756	SMARCAD1	100	50.249	Panthera_pardus
ENSCING00000001688	-	99	49.625	ENSPTIG00000017868	SMARCAD1	64	49.625	Panthera_tigris_altaica
ENSCING00000001688	-	99	49.700	ENSPTRG00000023126	SMARCAD1	100	50.415	Pan_troglodytes
ENSCING00000001688	-	99	48.132	ENSPANG00000019757	SMARCAD1	64	48.132	Papio_anubis
ENSCING00000001688	-	99	50.975	ENSPSIG00000010255	SMARCAD1	64	50.975	Pelodiscus_sinensis
ENSCING00000001688	-	97	50.077	ENSPMGG00000010735	smarcad1a	93	49.698	Periophthalmus_magnuspinnatus
ENSCING00000001688	-	99	42.042	ENSPEMG00000001854	Smarcad1	64	41.742	Peromyscus_maniculatus_bairdii
ENSCING00000001688	-	97	48.452	ENSPMAG00000003516	smarcad1a	64	48.452	Petromyzon_marinus
ENSCING00000001688	-	99	49.850	ENSPCIG00000008137	SMARCAD1	86	50.385	Phascolarctos_cinereus
ENSCING00000001688	-	99	49.394	ENSPFOG00000019116	smarcad1a	60	49.394	Poecilia_formosa
ENSCING00000001688	-	99	49.091	ENSPLAG00000000108	smarcad1a	60	49.091	Poecilia_latipinna
ENSCING00000001688	-	99	49.394	ENSPMEG00000009155	smarcad1a	60	49.394	Poecilia_mexicana
ENSCING00000001688	-	99	49.697	ENSPREG00000018185	smarcad1a	66	49.697	Poecilia_reticulata
ENSCING00000001688	-	99	49.625	ENSPPYG00000014935	SMARCAD1	64	49.625	Pongo_abelii
ENSCING00000001688	-	83	47.653	ENSPCOG00000020478	SMARCAD1	64	47.653	Propithecus_coquereli
ENSCING00000001688	-	99	49.251	ENSPVAG00000001760	SMARCAD1	64	49.251	Pteropus_vampyrus
ENSCING00000001688	-	96	48.916	ENSPNYG00000010087	smarcad1a	75	49.137	Pundamilia_nyererei
ENSCING00000001688	-	97	50.926	ENSPNAG00000010099	smarcad1b	69	50.531	Pygocentrus_nattereri
ENSCING00000001688	-	99	49.396	ENSPNAG00000001663	smarcad1a	67	49.396	Pygocentrus_nattereri
ENSCING00000001688	-	99	49.249	ENSRNOG00000006391	Smarcad1	64	49.249	Rattus_norvegicus
ENSCING00000001688	-	99	49.700	ENSRBIG00000041989	SMARCAD1	64	49.700	Rhinopithecus_bieti
ENSCING00000001688	-	99	49.700	ENSRROG00000035309	SMARCAD1	64	49.700	Rhinopithecus_roxellana
ENSCING00000001688	-	99	49.700	ENSSBOG00000032114	SMARCAD1	100	50.415	Saimiri_boliviensis_boliviensis
ENSCING00000001688	-	99	49.850	ENSSHAG00000001279	SMARCAD1	64	49.850	Sarcophilus_harrisii
ENSCING00000001688	-	99	49.094	ENSSFOG00015016814	smarcad1b	64	49.094	Scleropages_formosus
ENSCING00000001688	-	99	49.776	ENSSFOG00015020909	smarcad1a	87	49.776	Scleropages_formosus
ENSCING00000001688	-	99	49.924	ENSSMAG00000001326	smarcad1a	61	50.076	Scophthalmus_maximus
ENSCING00000001688	-	99	49.256	ENSSDUG00000022338	smarcad1a	78	49.547	Seriola_dumerili
ENSCING00000001688	-	99	49.403	ENSSLDG00000024986	smarcad1a	61	49.547	Seriola_lalandi_dorsalis
ENSCING00000001688	-	89	50.667	ENSSPUG00000004633	SMARCAD1	99	50.667	Sphenodon_punctatus
ENSCING00000001688	-	99	50.530	ENSSPAG00000001970	smarcad1a	61	50.530	Stegastes_partitus
ENSCING00000001688	-	99	49.775	ENSSSCG00000009193	SMARCAD1	78	49.775	Sus_scrofa
ENSCING00000001688	-	99	50.075	ENSTGUG00000003127	SMARCAD1	84	49.776	Taeniopygia_guttata
ENSCING00000001688	-	99	49.180	ENSTNIG00000017585	smarcad1a	76	49.180	Tetraodon_nigroviridis
ENSCING00000001688	-	99	49.249	ENSTTRG00000000226	SMARCAD1	66	49.249	Tursiops_truncatus
ENSCING00000001688	-	99	49.775	ENSUAMG00000022262	SMARCAD1	68	50.696	Ursus_americanus
ENSCING00000001688	-	99	49.775	ENSUMAG00000004549	SMARCAD1	64	49.775	Ursus_maritimus
ENSCING00000001688	-	99	50.000	ENSVVUG00000007271	SMARCAD1	78	50.000	Vulpes_vulpes
ENSCING00000001688	-	99	48.286	ENSXETG00000019214	smarcad1	75	48.286	Xenopus_tropicalis
ENSCING00000001688	-	98	49.614	ENSXCOG00000005232	smarcad1a	78	50.394	Xiphophorus_couchianus
ENSCING00000001688	-	99	49.394	ENSXMAG00000015350	smarcad1a	60	49.394	Xiphophorus_maculatus