EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001800 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2513 bases
Position: chr7:5023114-5025626
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000003638	MRP-L47	PF06984.13	5.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000003638	-	930	-	ENSCINP00000003638	278 (aa)	-	F6X5P6

Gene Model

Click here to download ENSCING00000001800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001800	-	88	41.057	ENSG00000136522	MRPL47	75	45.604	Homo_sapiens
ENSCING00000001800	-	51	48.227	ENSAPOG00000014123	mrpl47	54	48.227	Acanthochromis_polyacanthus
ENSCING00000001800	-	62	46.961	ENSAMEG00000010876	MRPL47	71	46.961	Ailuropoda_melanoleuca
ENSCING00000001800	-	51	48.227	ENSACIG00000012703	mrpl47	54	48.227	Amphilophus_citrinellus
ENSCING00000001800	-	51	46.809	ENSAOCG00000008347	mrpl47	54	46.809	Amphiprion_ocellaris
ENSCING00000001800	-	51	46.809	ENSAPEG00000005830	mrpl47	54	46.809	Amphiprion_percula
ENSCING00000001800	-	51	46.809	ENSATEG00000009838	mrpl47	54	46.809	Anabas_testudineus
ENSCING00000001800	-	51	54.110	ENSAPLG00000011793	MRPL47	71	54.730	Anas_platyrhynchos
ENSCING00000001800	-	65	37.056	ENSANAG00000029476	-	75	37.056	Aotus_nancymaae
ENSCING00000001800	-	65	44.503	ENSANAG00000037296	-	91	41.364	Aotus_nancymaae
ENSCING00000001800	-	51	48.936	ENSACLG00000019621	mrpl47	57	48.936	Astatotilapia_calliptera
ENSCING00000001800	-	60	44.767	ENSAMXG00000011888	mrpl47	69	44.767	Astyanax_mexicanus
ENSCING00000001800	-	88	39.453	ENSBTAG00000002462	MRPL47	76	45.078	Bos_taurus
ENSCING00000001800	-	55	38.365	WBGene00015092	mrpl-47	74	38.365	Caenorhabditis_elegans
ENSCING00000001800	-	62	43.931	ENSCJAG00000014820	-	84	40.187	Callithrix_jacchus
ENSCING00000001800	-	50	53.237	ENSCJAG00000013028	-	56	53.237	Callithrix_jacchus
ENSCING00000001800	-	58	49.383	ENSCAFG00000011380	MRPL47	63	49.383	Canis_familiaris
ENSCING00000001800	-	58	49.383	ENSCAFG00020023127	MRPL47	63	49.383	Canis_lupus_dingo
ENSCING00000001800	-	88	39.062	ENSCHIG00000013922	MRPL47	76	45.078	Capra_hircus
ENSCING00000001800	-	64	42.697	ENSTSYG00000032115	-	71	45.000	Carlito_syrichta
ENSCING00000001800	-	65	44.974	ENSTSYG00000001541	-	76	44.974	Carlito_syrichta
ENSCING00000001800	-	65	40.110	ENSCPOG00000024304	-	75	40.110	Cavia_porcellus
ENSCING00000001800	-	88	40.625	ENSCPOG00000002312	-	76	46.316	Cavia_porcellus
ENSCING00000001800	-	50	53.957	ENSCCAG00000037348	MRPL47	56	53.957	Cebus_capucinus
ENSCING00000001800	-	73	42.365	ENSCATG00000020336	-	56	49.640	Cercocebus_atys
ENSCING00000001800	-	88	31.641	ENSCATG00000029931	-	72	32.812	Cercocebus_atys
ENSCING00000001800	-	75	42.222	ENSCLAG00000015039	-	88	42.222	Chinchilla_lanigera
ENSCING00000001800	-	75	42.081	ENSCLAG00000017681	-	88	41.629	Chinchilla_lanigera
ENSCING00000001800	-	62	46.023	ENSCLAG00000017678	-	88	41.629	Chinchilla_lanigera
ENSCING00000001800	-	50	52.518	ENSCSAG00000010884	-	58	52.518	Chlorocebus_sabaeus
ENSCING00000001800	-	73	44.335	ENSCSAG00000013046	-	56	51.799	Chlorocebus_sabaeus
ENSCING00000001800	-	65	47.872	ENSCPBG00000026934	MRPL47	77	47.872	Chrysemys_picta_bellii
ENSCING00000001800	-	56	73.125	ENSCSAVG00000009623	-	99	73.125	Ciona_savignyi
ENSCING00000001800	-	65	45.902	ENSCGRG00001015111	Mrpl47	72	45.902	Cricetulus_griseus_chok1gshd
ENSCING00000001800	-	51	53.191	ENSCGRG00000017426	Mrpl47	56	53.191	Cricetulus_griseus_crigri
ENSCING00000001800	-	51	48.227	ENSCSEG00000013581	mrpl47	54	48.227	Cynoglossus_semilaevis
ENSCING00000001800	-	64	43.386	ENSCVAG00000007629	mrpl47	69	43.386	Cyprinodon_variegatus
ENSCING00000001800	-	51	45.390	ENSDARG00000075743	mrpl47	57	45.390	Danio_rerio
ENSCING00000001800	-	80	41.593	ENSDNOG00000015052	MRPL47	64	48.466	Dasypus_novemcinctus
ENSCING00000001800	-	51	52.817	ENSDORG00000007650	Mrpl47	62	52.817	Dipodomys_ordii
ENSCING00000001800	-	52	46.207	FBgn0014023	mRpL47	54	46.207	Drosophila_melanogaster
ENSCING00000001800	-	50	52.518	ENSETEG00000019362	MRPL47	55	52.518	Echinops_telfairi
ENSCING00000001800	-	62	41.622	ENSEBUG00000014208	mrpl47	74	41.622	Eptatretus_burgeri
ENSCING00000001800	-	50	52.518	ENSEASG00005016858	MRPL47	55	52.518	Equus_asinus_asinus
ENSCING00000001800	-	61	46.471	ENSECAG00000018545	MRPL47	68	46.471	Equus_caballus
ENSCING00000001800	-	50	48.201	ENSELUG00000004619	mrpl47	54	48.201	Esox_lucius
ENSCING00000001800	-	50	52.518	ENSFCAG00000039093	MRPL47	56	52.518	Felis_catus
ENSCING00000001800	-	53	54.795	ENSFALG00000008365	MRPL47	68	54.795	Ficedula_albicollis
ENSCING00000001800	-	65	44.503	ENSFDAG00000014402	MRPL47	79	44.503	Fukomys_damarensis
ENSCING00000001800	-	64	44.199	ENSFHEG00000007456	mrpl47	67	44.199	Fundulus_heteroclitus
ENSCING00000001800	-	51	44.366	ENSGMOG00000017332	mrpl47	63	44.366	Gadus_morhua
ENSCING00000001800	-	50	54.676	ENSGALG00000013759	MRPL47	56	54.676	Gallus_gallus
ENSCING00000001800	-	64	43.407	ENSGAFG00000013445	mrpl47	69	43.407	Gambusia_affinis
ENSCING00000001800	-	59	43.030	ENSGACG00000009992	mrpl47	68	43.030	Gasterosteus_aculeatus
ENSCING00000001800	-	65	47.895	ENSGAGG00000016462	MRPL47	77	47.895	Gopherus_agassizii
ENSCING00000001800	-	73	44.335	ENSGGOG00000027171	MRPL47	63	51.799	Gorilla_gorilla
ENSCING00000001800	-	65	41.414	ENSHBUG00000022567	mrpl47	74	41.414	Haplochromis_burtoni
ENSCING00000001800	-	61	42.222	ENSHGLG00000012776	-	74	42.222	Heterocephalus_glaber_female
ENSCING00000001800	-	50	51.799	ENSHGLG00000013945	MRPL47	76	45.550	Heterocephalus_glaber_female
ENSCING00000001800	-	61	42.222	ENSHGLG00100018544	-	78	42.222	Heterocephalus_glaber_male
ENSCING00000001800	-	50	51.799	ENSHGLG00100003873	MRPL47	76	45.550	Heterocephalus_glaber_male
ENSCING00000001800	-	50	51.079	ENSHCOG00000018946	mrpl47	54	51.079	Hippocampus_comes
ENSCING00000001800	-	60	44.186	ENSIPUG00000009200	mrpl47	69	44.186	Ictalurus_punctatus
ENSCING00000001800	-	53	51.333	ENSJJAG00000020002	Mrpl47	60	51.333	Jaculus_jaculus
ENSCING00000001800	-	53	50.000	ENSKMAG00000022044	mrpl47	58	50.000	Kryptolebias_marmoratus
ENSCING00000001800	-	62	42.105	ENSLBEG00000027302	mrpl47	56	42.105	Labrus_bergylta
ENSCING00000001800	-	53	50.685	ENSLACG00000014781	MRPL47	58	50.685	Latimeria_chalumnae
ENSCING00000001800	-	53	46.575	ENSLOCG00000001289	mrpl47	56	48.227	Lepisosteus_oculatus
ENSCING00000001800	-	58	48.750	ENSLAFG00000018470	MRPL47	63	48.750	Loxodonta_africana
ENSCING00000001800	-	73	40.887	ENSMFAG00000039679	-	63	47.482	Macaca_fascicularis
ENSCING00000001800	-	73	44.335	ENSMFAG00000000293	MRPL47	63	51.799	Macaca_fascicularis
ENSCING00000001800	-	73	44.335	ENSMMUG00000009744	MRPL47	56	51.799	Macaca_mulatta
ENSCING00000001800	-	73	34.975	ENSMNEG00000043074	-	59	38.129	Macaca_nemestrina
ENSCING00000001800	-	73	44.335	ENSMNEG00000001870	-	66	51.799	Macaca_nemestrina
ENSCING00000001800	-	73	42.365	ENSMLEG00000036668	-	63	49.640	Mandrillus_leucophaeus
ENSCING00000001800	-	65	41.414	ENSMZEG00005002155	mrpl47	76	41.414	Maylandia_zebra
ENSCING00000001800	-	51	53.191	ENSMAUG00000010772	Mrpl47	56	53.191	Mesocricetus_auratus
ENSCING00000001800	-	65	44.503	ENSMICG00000049377	MRPL47	75	44.503	Microcebus_murinus
ENSCING00000001800	-	68	39.896	ENSMOCG00000001968	-	82	39.896	Microtus_ochrogaster
ENSCING00000001800	-	61	46.512	ENSMOCG00000007933	-	68	46.512	Microtus_ochrogaster
ENSCING00000001800	-	51	48.227	ENSMMOG00000019550	mrpl47	62	48.227	Mola_mola
ENSCING00000001800	-	60	50.000	ENSMODG00000021301	MRPL47	74	50.000	Monodelphis_domestica
ENSCING00000001800	-	51	53.901	MGP_CAROLIEiJ_G0024921	Mrpl47	56	53.901	Mus_caroli
ENSCING00000001800	-	51	52.482	ENSMUSG00000037531	Mrpl47	56	52.482	Mus_musculus
ENSCING00000001800	-	51	53.191	MGP_PahariEiJ_G0026366	Mrpl47	56	53.191	Mus_pahari
ENSCING00000001800	-	51	53.191	MGP_SPRETEiJ_G0025855	Mrpl47	56	53.191	Mus_spretus
ENSCING00000001800	-	65	45.685	ENSMPUG00000017214	MRPL47	77	45.685	Mustela_putorius_furo
ENSCING00000001800	-	74	41.071	ENSMLUG00000000996	MRPL47	88	41.071	Myotis_lucifugus
ENSCING00000001800	-	65	45.503	ENSNGAG00000022354	Mrpl47	76	45.503	Nannospalax_galili
ENSCING00000001800	-	65	40.816	ENSNBRG00000017251	mrpl47	76	41.837	Neolamprologus_brichardi
ENSCING00000001800	-	65	40.816	ENSNBRG00000004178	mrpl47	76	41.837	Neolamprologus_brichardi
ENSCING00000001800	-	88	40.650	ENSNLEG00000005831	MRPL47	75	45.055	Nomascus_leucogenys
ENSCING00000001800	-	51	46.099	ENSMEUG00000012649	-	68	46.099	Notamacropus_eugenii
ENSCING00000001800	-	60	43.353	ENSOPRG00000007831	MRPL47	73	46.203	Ochotona_princeps
ENSCING00000001800	-	65	40.212	ENSODEG00000017632	-	75	40.212	Octodon_degus
ENSCING00000001800	-	51	47.518	ENSONIG00000001683	mrpl47	54	47.518	Oreochromis_niloticus
ENSCING00000001800	-	50	49.640	ENSOANG00000002136	-	57	49.640	Ornithorhynchus_anatinus
ENSCING00000001800	-	58	49.375	ENSOCUG00000017886	MRPL47	62	53.191	Oryctolagus_cuniculus
ENSCING00000001800	-	51	51.064	ENSORLG00000023413	mrpl47	55	51.064	Oryzias_latipes
ENSCING00000001800	-	51	51.064	ENSORLG00020021449	mrpl47	55	51.064	Oryzias_latipes_hni
ENSCING00000001800	-	51	51.064	ENSORLG00015018692	mrpl47	55	51.064	Oryzias_latipes_hsok
ENSCING00000001800	-	53	47.297	ENSOMEG00000014147	mrpl47	57	47.297	Oryzias_melastigma
ENSCING00000001800	-	50	51.799	ENSOGAG00000016957	MRPL47	56	51.799	Otolemur_garnettii
ENSCING00000001800	-	88	39.062	ENSOARG00000020692	MRPL47	75	45.078	Ovis_aries
ENSCING00000001800	-	73	44.335	ENSPPAG00000028033	MRPL47	63	51.799	Pan_paniscus
ENSCING00000001800	-	61	47.674	ENSPPRG00000000050	MRPL47	68	47.674	Panthera_pardus
ENSCING00000001800	-	58	49.383	ENSPTIG00000007879	MRPL47	63	49.383	Panthera_tigris_altaica
ENSCING00000001800	-	73	44.335	ENSPTRG00000015648	MRPL47	63	51.799	Pan_troglodytes
ENSCING00000001800	-	73	44.335	ENSPANG00000008191	MRPL47	63	51.799	Papio_anubis
ENSCING00000001800	-	54	48.322	ENSPKIG00000012608	mrpl47	73	43.617	Paramormyrops_kingsleyae
ENSCING00000001800	-	51	53.901	ENSPSIG00000011536	MRPL47	59	53.901	Pelodiscus_sinensis
ENSCING00000001800	-	61	41.176	ENSPCIG00000026899	-	63	41.176	Phascolarctos_cinereus
ENSCING00000001800	-	62	49.425	ENSPCIG00000006780	-	69	49.425	Phascolarctos_cinereus
ENSCING00000001800	-	64	41.436	ENSPFOG00000014965	mrpl47	69	41.436	Poecilia_formosa
ENSCING00000001800	-	51	47.518	ENSPLAG00000011483	mrpl47	54	47.518	Poecilia_latipinna
ENSCING00000001800	-	64	41.436	ENSPMEG00000012490	mrpl47	69	41.436	Poecilia_mexicana
ENSCING00000001800	-	51	48.227	ENSPREG00000015080	mrpl47	54	48.227	Poecilia_reticulata
ENSCING00000001800	-	73	44.335	ENSPPYG00000014321	MRPL47	56	51.799	Pongo_abelii
ENSCING00000001800	-	50	52.518	ENSPCAG00000016517	MRPL47	64	52.518	Procavia_capensis
ENSCING00000001800	-	65	47.090	ENSPCOG00000019367	MRPL47	76	47.090	Propithecus_coquereli
ENSCING00000001800	-	59	47.929	ENSPVAG00000004284	MRPL47	68	47.929	Pteropus_vampyrus
ENSCING00000001800	-	65	41.414	ENSPNYG00000005479	mrpl47	76	41.414	Pundamilia_nyererei
ENSCING00000001800	-	79	39.286	ENSPNAG00000026692	mrpl47	82	39.732	Pygocentrus_nattereri
ENSCING00000001800	-	51	52.482	ENSRNOG00000011639	Mrpl47	56	52.482	Rattus_norvegicus
ENSCING00000001800	-	71	44.221	ENSRBIG00000030725	MRPL47	59	51.799	Rhinopithecus_bieti
ENSCING00000001800	-	50	51.799	ENSRROG00000034003	MRPL47	63	51.799	Rhinopithecus_roxellana
ENSCING00000001800	-	50	53.957	ENSSBOG00000018241	MRPL47	56	53.957	Saimiri_boliviensis_boliviensis
ENSCING00000001800	-	59	48.521	ENSSHAG00000017273	MRPL47	69	48.521	Sarcophilus_harrisii
ENSCING00000001800	-	50	50.360	ENSSFOG00015017849	mrpl47	52	50.360	Scleropages_formosus
ENSCING00000001800	-	51	46.809	ENSSMAG00000003013	mrpl47	52	46.809	Scophthalmus_maximus
ENSCING00000001800	-	51	46.809	ENSSDUG00000003140	mrpl47	54	46.809	Seriola_dumerili
ENSCING00000001800	-	51	46.809	ENSSLDG00000017795	mrpl47	54	46.809	Seriola_lalandi_dorsalis
ENSCING00000001800	-	65	40.722	ENSSARG00000006898	-	77	40.722	Sorex_araneus
ENSCING00000001800	-	65	43.455	ENSSPUG00000014635	MRPL47	79	43.455	Sphenodon_punctatus
ENSCING00000001800	-	55	47.368	ENSSPAG00000002660	mrpl47	57	47.368	Stegastes_partitus
ENSCING00000001800	-	65	45.856	ENSSSCG00000011763	MRPL47	72	45.856	Sus_scrofa
ENSCING00000001800	-	51	56.028	ENSTGUG00000010649	-	66	56.028	Taeniopygia_guttata
ENSCING00000001800	-	51	39.007	ENSTRUG00000017597	mrpl47	55	39.007	Takifugu_rubripes
ENSCING00000001800	-	63	42.857	ENSTNIG00000015545	mrpl47	63	48.227	Tetraodon_nigroviridis
ENSCING00000001800	-	51	41.135	ENSTBEG00000004852	-	61	41.135	Tupaia_belangeri
ENSCING00000001800	-	61	38.953	ENSTTRG00000008909	MRPL47	68	38.953	Tursiops_truncatus
ENSCING00000001800	-	58	49.383	ENSUAMG00000007563	MRPL47	72	49.383	Ursus_americanus
ENSCING00000001800	-	65	45.178	ENSUMAG00000007554	MRPL47	77	45.178	Ursus_maritimus
ENSCING00000001800	-	65	46.995	ENSVPAG00000006633	MRPL47	72	46.995	Vicugna_pacos
ENSCING00000001800	-	58	49.383	ENSVVUG00000004837	MRPL47	63	49.383	Vulpes_vulpes
ENSCING00000001800	-	65	44.199	ENSXCOG00000002915	mrpl47	68	44.199	Xiphophorus_couchianus
ENSCING00000001800	-	51	48.227	ENSXMAG00000018249	mrpl47	54	48.227	Xiphophorus_maculatus