EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001837 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5129 bases
Position: chr4:2530340-2535468
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000003726	ResIII	PF04851.15	3.4e-06	1	1
ENSCINP00000003726	DEAD	PF00270.29	4.3e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000003726	-	1737	-	ENSCINP00000003726	450 (aa)	-	F6T7R0

Gene Model

Click here to download ENSCING00000001837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001837's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001837	-	94	67.991	ENSG00000198231	DDX42	63	66.368	Homo_sapiens
ENSCING00000001837	-	94	68.140	ENSAPOG00000017675	ddx42	53	63.771	Acanthochromis_polyacanthus
ENSCING00000001837	-	96	67.416	ENSACIG00000007376	ddx42	58	67.865	Amphilophus_citrinellus
ENSCING00000001837	-	94	67.048	ENSATEG00000022920	ddx42	50	65.275	Anabas_testudineus
ENSCING00000001837	-	94	68.150	ENSANAG00000035693	DDX42	63	66.517	Aotus_nancymaae
ENSCING00000001837	-	96	67.191	ENSACLG00000025113	ddx42	50	67.640	Astatotilapia_calliptera
ENSCING00000001837	-	94	66.667	ENSBTAG00000021058	DDX42	65	63.248	Bos_taurus
ENSCING00000001837	-	94	67.991	ENSCJAG00000019649	DDX42	62	66.368	Callithrix_jacchus
ENSCING00000001837	-	94	68.224	ENSTSYG00000001380	DDX42	59	63.087	Carlito_syrichta
ENSCING00000001837	-	96	54.545	ENSCAPG00000013621	DDX42	62	54.545	Cavia_aperea
ENSCING00000001837	-	94	67.991	ENSCCAG00000020612	DDX42	63	66.368	Cebus_capucinus
ENSCING00000001837	-	94	67.991	ENSCATG00000030490	DDX42	58	66.368	Cercocebus_atys
ENSCING00000001837	-	84	90.789	ENSCSAVG00000002180	-	99	90.789	Ciona_savignyi
ENSCING00000001837	-	94	67.991	ENSCANG00000034663	DDX42	64	66.368	Colobus_angolensis_palliatus
ENSCING00000001837	-	97	66.592	ENSCSEG00000021574	ddx42	50	67.040	Cynoglossus_semilaevis
ENSCING00000001837	-	94	67.442	ENSCVAG00000011404	ddx42	50	65.625	Cyprinodon_variegatus
ENSCING00000001837	-	94	62.558	ENSDORG00000004199	Ddx42	50	61.161	Dipodomys_ordii
ENSCING00000001837	-	99	56.707	FBgn0036104	CG6418	62	58.197	Drosophila_melanogaster
ENSCING00000001837	-	96	64.270	ENSEBUG00000001155	ddx42	54	64.270	Eptatretus_burgeri
ENSCING00000001837	-	94	67.832	ENSEASG00005013089	DDX42	63	66.219	Equus_asinus_asinus
ENSCING00000001837	-	94	67.832	ENSFCAG00000003499	DDX42	55	66.219	Felis_catus
ENSCING00000001837	-	94	67.206	ENSFHEG00000023290	ddx42	50	65.854	Fundulus_heteroclitus
ENSCING00000001837	-	94	67.907	ENSGAFG00000011846	ddx42	50	66.518	Gambusia_affinis
ENSCING00000001837	-	99	59.227	ENSGACG00000009782	ddx42	53	59.227	Gasterosteus_aculeatus
ENSCING00000001837	-	94	67.991	ENSGGOG00000006779	DDX42	62	66.368	Gorilla_gorilla
ENSCING00000001837	-	94	69.321	ENSHCOG00000003357	ddx42	63	66.213	Hippocampus_comes
ENSCING00000001837	-	97	66.441	ENSIPUG00000013327	ddx42	51	66.441	Ictalurus_punctatus
ENSCING00000001837	-	97	65.044	ENSKMAG00000009914	ddx42	50	65.342	Kryptolebias_marmoratus
ENSCING00000001837	-	94	67.991	ENSMFAG00000031356	DDX42	58	66.368	Macaca_fascicularis
ENSCING00000001837	-	94	67.991	ENSMMUG00000016762	DDX42	62	66.368	Macaca_mulatta
ENSCING00000001837	-	94	67.991	ENSMNEG00000038250	DDX42	59	66.368	Macaca_nemestrina
ENSCING00000001837	-	94	67.991	ENSMLEG00000043080	DDX42	58	62.389	Mandrillus_leucophaeus
ENSCING00000001837	-	96	66.443	ENSMAUG00000020774	-	60	66.443	Mesocricetus_auratus
ENSCING00000001837	-	94	68.224	ENSMICG00000009952	DDX42	50	66.592	Microcebus_murinus
ENSCING00000001837	-	100	63.877	MGP_PahariEiJ_G0018444	-	54	71.875	Mus_pahari
ENSCING00000001837	-	96	67.191	ENSNBRG00000004466	ddx42	50	67.640	Neolamprologus_brichardi
ENSCING00000001837	-	94	67.991	ENSNLEG00000004248	DDX42	64	66.368	Nomascus_leucogenys
ENSCING00000001837	-	81	67.945	ENSOANG00000000265	DDX42	68	67.945	Ornithorhynchus_anatinus
ENSCING00000001837	-	96	65.688	ENSORLG00000002395	ddx42	50	65.688	Oryzias_latipes
ENSCING00000001837	-	96	66.140	ENSORLG00020011621	ddx42	50	66.140	Oryzias_latipes_hni
ENSCING00000001837	-	96	66.140	ENSORLG00015004487	ddx42	50	66.140	Oryzias_latipes_hsok
ENSCING00000001837	-	94	67.991	ENSPPAG00000007496	DDX42	63	66.368	Pan_paniscus
ENSCING00000001837	-	94	67.991	ENSPTRG00000009523	DDX42	63	66.368	Pan_troglodytes
ENSCING00000001837	-	94	67.991	ENSPANG00000020990	DDX42	59	66.368	Papio_anubis
ENSCING00000001837	-	94	68.150	ENSPKIG00000002901	ddx42	50	68.150	Paramormyrops_kingsleyae
ENSCING00000001837	-	96	65.772	ENSPSIG00000010289	DDX42	54	65.772	Pelodiscus_sinensis
ENSCING00000001837	-	94	68.000	ENSPMGG00000009323	ddx42	51	66.140	Periophthalmus_magnuspinnatus
ENSCING00000001837	-	94	65.654	ENSPMAG00000005580	ddx42	57	65.654	Petromyzon_marinus
ENSCING00000001837	-	94	61.772	ENSPCAG00000002474	DDX42	52	60.403	Procavia_capensis
ENSCING00000001837	-	83	65.969	ENSPCOG00000001559	DDX42	59	64.781	Propithecus_coquereli
ENSCING00000001837	-	96	63.596	ENSPNYG00000013954	ddx42	55	64.045	Pundamilia_nyererei
ENSCING00000001837	-	96	68.109	ENSPNAG00000017352	ddx42	57	65.753	Pygocentrus_nattereri
ENSCING00000001837	-	94	67.991	ENSRBIG00000004781	DDX42	64	66.368	Rhinopithecus_bieti
ENSCING00000001837	-	94	67.991	ENSRROG00000029794	DDX42	55	66.368	Rhinopithecus_roxellana
ENSCING00000001837	-	94	67.991	ENSSBOG00000029624	DDX42	62	66.368	Saimiri_boliviensis_boliviensis
ENSCING00000001837	-	95	45.309	ENSSHAG00000007919	-	63	45.309	Sarcophilus_harrisii
ENSCING00000001837	-	94	67.523	ENSSMAG00000009077	ddx42	57	67.523	Scophthalmus_maximus
ENSCING00000001837	-	97	65.859	ENSSDUG00000022221	ddx42	50	65.859	Seriola_dumerili
ENSCING00000001837	-	94	68.065	ENSSSCG00000017289	DDX42	56	66.443	Sus_scrofa
ENSCING00000001837	-	94	64.336	ENSTBEG00000010159	DDX42	59	62.723	Tupaia_belangeri
ENSCING00000001837	-	94	67.442	ENSXCOG00000017560	ddx42	57	65.625	Xiphophorus_couchianus
ENSCING00000001837	-	94	67.674	ENSXMAG00000008138	ddx42	50	65.848	Xiphophorus_maculatus