EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001869 (Gene tree)
Gene ID: 100186307
Gene Symbol: -
Alias: -
Full Name: tRNA-dihydrouridine(20a/20b) synthase
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 930 bases
Position: chr12:1340378-1341307
Accession: 100186307
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000003786	Dus	PF01207.17	4.3e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000003786	-	930	XM_002120404	ENSCINP00000003786	309 (aa)	XP_002120440	F6SJF0

Gene Model

Click here to download ENSCING00000001869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001869	-	96	53.535	ENSG00000105865	DUS4L	94	53.535	Homo_sapiens
ENSCING00000001869	-	96	54.698	ENSAPOG00000015063	dus4l	95	54.698	Acanthochromis_polyacanthus
ENSCING00000001869	-	96	54.882	ENSAMEG00000013535	DUS4L	92	54.882	Ailuropoda_melanoleuca
ENSCING00000001869	-	97	55.518	ENSACIG00000017392	dus4l	95	55.518	Amphilophus_citrinellus
ENSCING00000001869	-	97	54.485	ENSAOCG00000007191	dus4l	96	54.485	Amphiprion_ocellaris
ENSCING00000001869	-	97	54.485	ENSAPEG00000015296	dus4l	96	54.485	Amphiprion_percula
ENSCING00000001869	-	97	54.000	ENSATEG00000009040	dus4l	95	54.000	Anabas_testudineus
ENSCING00000001869	-	96	58.389	ENSAPLG00000007641	DUS4L	98	58.389	Anas_platyrhynchos
ENSCING00000001869	-	94	58.276	ENSACAG00000015202	DUS4L	89	58.276	Anolis_carolinensis
ENSCING00000001869	-	96	54.545	ENSANAG00000037839	DUS4L	97	54.545	Aotus_nancymaae
ENSCING00000001869	-	97	54.515	ENSACLG00000021844	dus4l	95	54.515	Astatotilapia_calliptera
ENSCING00000001869	-	95	54.266	ENSAMXG00000032924	dus4l	98	54.266	Astyanax_mexicanus
ENSCING00000001869	-	96	55.892	ENSBTAG00000021849	DUS4L	93	55.892	Bos_taurus
ENSCING00000001869	-	91	45.745	WBGene00016674	C45G9.2	99	45.745	Caenorhabditis_elegans
ENSCING00000001869	-	96	53.872	ENSCJAG00000016323	DUS4L	94	53.872	Callithrix_jacchus
ENSCING00000001869	-	96	54.545	ENSCAFG00000003919	DUS4L	94	54.545	Canis_familiaris
ENSCING00000001869	-	96	54.545	ENSCAFG00020023124	DUS4L	94	54.545	Canis_lupus_dingo
ENSCING00000001869	-	96	55.219	ENSCHIG00000010888	DUS4L	93	55.219	Capra_hircus
ENSCING00000001869	-	96	54.545	ENSTSYG00000010065	DUS4L	94	54.545	Carlito_syrichta
ENSCING00000001869	-	89	45.091	ENSCAPG00000007215	DUS4L	99	45.091	Cavia_aperea
ENSCING00000001869	-	96	54.882	ENSCPOG00000002384	DUS4L	94	54.882	Cavia_porcellus
ENSCING00000001869	-	96	53.872	ENSCCAG00000027960	DUS4L	94	53.872	Cebus_capucinus
ENSCING00000001869	-	96	53.872	ENSCATG00000031611	DUS4L	94	53.872	Cercocebus_atys
ENSCING00000001869	-	96	54.545	ENSCLAG00000012135	DUS4L	94	54.545	Chinchilla_lanigera
ENSCING00000001869	-	96	53.535	ENSCSAG00000011370	DUS4L	94	53.535	Chlorocebus_sabaeus
ENSCING00000001869	-	64	57.360	ENSCHOG00000006848	DUS4L	85	57.360	Choloepus_hoffmanni
ENSCING00000001869	-	93	60.279	ENSCPBG00000000863	DUS4L	91	60.279	Chrysemys_picta_bellii
ENSCING00000001869	-	97	76.080	ENSCSAVG00000005308	-	99	76.080	Ciona_savignyi
ENSCING00000001869	-	96	53.872	ENSCANG00000024456	DUS4L	94	53.872	Colobus_angolensis_palliatus
ENSCING00000001869	-	96	56.229	ENSCGRG00001014181	Dus4l	94	56.229	Cricetulus_griseus_chok1gshd
ENSCING00000001869	-	96	56.229	ENSCGRG00000000384	Dus4l	94	56.229	Cricetulus_griseus_crigri
ENSCING00000001869	-	97	55.518	ENSCSEG00000018179	dus4l	94	55.518	Cynoglossus_semilaevis
ENSCING00000001869	-	97	54.153	ENSCVAG00000010487	dus4l	95	54.153	Cyprinodon_variegatus
ENSCING00000001869	-	96	54.362	ENSDARG00000006567	dus4l	97	54.362	Danio_rerio
ENSCING00000001869	-	96	56.229	ENSDNOG00000030725	DUS4L	94	56.229	Dasypus_novemcinctus
ENSCING00000001869	-	96	55.219	ENSDORG00000010587	Dus4l	94	55.219	Dipodomys_ordii
ENSCING00000001869	-	93	45.515	FBgn0032750	CG10495	75	45.515	Drosophila_melanogaster
ENSCING00000001869	-	65	40.000	ENSETEG00000004577	-	87	40.000	Echinops_telfairi
ENSCING00000001869	-	96	52.013	ENSEBUG00000008924	dus4l	95	52.013	Eptatretus_burgeri
ENSCING00000001869	-	96	54.882	ENSEASG00005017480	DUS4L	94	54.882	Equus_asinus_asinus
ENSCING00000001869	-	96	54.882	ENSECAG00000014852	DUS4L	94	54.882	Equus_caballus
ENSCING00000001869	-	97	55.667	ENSELUG00000017740	dus4l	94	55.667	Esox_lucius
ENSCING00000001869	-	96	54.209	ENSFCAG00000041439	DUS4L	94	54.209	Felis_catus
ENSCING00000001869	-	96	56.856	ENSFALG00000010246	DUS4L	94	56.856	Ficedula_albicollis
ENSCING00000001869	-	96	54.545	ENSFDAG00000010206	DUS4L	94	54.545	Fukomys_damarensis
ENSCING00000001869	-	97	54.485	ENSFHEG00000020124	dus4l	96	54.485	Fundulus_heteroclitus
ENSCING00000001869	-	98	52.475	ENSGMOG00000001452	dus4l	98	52.475	Gadus_morhua
ENSCING00000001869	-	93	57.986	ENSGALG00000023661	DUS4L	91	57.986	Gallus_gallus
ENSCING00000001869	-	98	53.974	ENSGAFG00000010054	dus4l	96	53.974	Gambusia_affinis
ENSCING00000001869	-	96	54.698	ENSGACG00000008772	dus4l	94	54.698	Gasterosteus_aculeatus
ENSCING00000001869	-	96	53.535	ENSGGOG00000003821	DUS4L	94	53.535	Gorilla_gorilla
ENSCING00000001869	-	97	54.515	ENSHBUG00000015255	dus4l	95	54.515	Haplochromis_burtoni
ENSCING00000001869	-	96	54.545	ENSHGLG00000018976	DUS4L	94	54.545	Heterocephalus_glaber_female
ENSCING00000001869	-	96	54.545	ENSHGLG00100002604	DUS4L	94	54.545	Heterocephalus_glaber_male
ENSCING00000001869	-	97	55.000	ENSHCOG00000015919	dus4l	96	55.000	Hippocampus_comes
ENSCING00000001869	-	97	54.333	ENSIPUG00000014454	dus4l	99	54.545	Ictalurus_punctatus
ENSCING00000001869	-	96	54.545	ENSSTOG00000000212	DUS4L	94	54.545	Ictidomys_tridecemlineatus
ENSCING00000001869	-	96	54.882	ENSJJAG00000013626	Dus4l	96	54.882	Jaculus_jaculus
ENSCING00000001869	-	97	52.159	ENSKMAG00000013719	dus4l	95	52.159	Kryptolebias_marmoratus
ENSCING00000001869	-	96	55.369	ENSLBEG00000018142	dus4l	95	55.369	Labrus_bergylta
ENSCING00000001869	-	71	55.505	ENSLACG00000000451	DUS4L	93	55.505	Latimeria_chalumnae
ENSCING00000001869	-	99	54.194	ENSLOCG00000015815	dus4l	95	54.194	Lepisosteus_oculatus
ENSCING00000001869	-	96	55.892	ENSLAFG00000000968	DUS4L	94	55.892	Loxodonta_africana
ENSCING00000001869	-	96	53.872	ENSMFAG00000003759	DUS4L	94	53.872	Macaca_fascicularis
ENSCING00000001869	-	96	53.872	ENSMNEG00000040594	DUS4L	94	53.872	Macaca_nemestrina
ENSCING00000001869	-	96	53.872	ENSMLEG00000037658	DUS4L	94	53.872	Mandrillus_leucophaeus
ENSCING00000001869	-	97	53.667	ENSMAMG00000007717	dus4l	86	53.667	Mastacembelus_armatus
ENSCING00000001869	-	89	54.909	ENSMZEG00005014697	dus4l	93	54.909	Maylandia_zebra
ENSCING00000001869	-	76	57.021	ENSMGAG00000009714	DUS4L	96	57.021	Meleagris_gallopavo
ENSCING00000001869	-	96	56.902	ENSMAUG00000016651	Dus4l	94	56.902	Mesocricetus_auratus
ENSCING00000001869	-	97	43.478	ENSMICG00000027213	-	92	43.478	Microcebus_murinus
ENSCING00000001869	-	96	55.556	ENSMICG00000042944	-	94	55.556	Microcebus_murinus
ENSCING00000001869	-	96	57.239	ENSMOCG00000019344	Dus4l	94	57.239	Microtus_ochrogaster
ENSCING00000001869	-	97	51.000	ENSMMOG00000011517	dus4l	95	51.000	Mola_mola
ENSCING00000001869	-	96	54.882	ENSMODG00000016361	DUS4L	94	54.882	Monodelphis_domestica
ENSCING00000001869	-	97	53.156	ENSMALG00000002457	dus4l	95	53.156	Monopterus_albus
ENSCING00000001869	-	97	56.187	MGP_CAROLIEiJ_G0017680	Dus4l	92	56.187	Mus_caroli
ENSCING00000001869	-	97	56.522	ENSMUSG00000020648	Dus4l	92	56.522	Mus_musculus
ENSCING00000001869	-	97	55.667	MGP_PahariEiJ_G0029438	Dus4l	93	55.667	Mus_pahari
ENSCING00000001869	-	97	56.856	MGP_SPRETEiJ_G0018522	Dus4l	92	56.856	Mus_spretus
ENSCING00000001869	-	96	55.219	ENSMPUG00000018247	DUS4L	97	55.219	Mustela_putorius_furo
ENSCING00000001869	-	71	53.670	ENSMLUG00000002731	DUS4L	92	53.670	Myotis_lucifugus
ENSCING00000001869	-	96	53.199	ENSNGAG00000022335	Dus4l	94	53.199	Nannospalax_galili
ENSCING00000001869	-	97	54.849	ENSNBRG00000013582	dus4l	95	54.849	Neolamprologus_brichardi
ENSCING00000001869	-	96	53.535	ENSNLEG00000008716	DUS4L	94	53.535	Nomascus_leucogenys
ENSCING00000001869	-	63	43.077	ENSMEUG00000000187	-	99	43.077	Notamacropus_eugenii
ENSCING00000001869	-	70	54.378	ENSOPRG00000005394	DUS4L	92	54.378	Ochotona_princeps
ENSCING00000001869	-	96	54.882	ENSODEG00000001582	DUS4L	94	54.882	Octodon_degus
ENSCING00000001869	-	97	54.515	ENSONIG00000004993	dus4l	95	54.515	Oreochromis_niloticus
ENSCING00000001869	-	96	55.556	ENSOANG00000003179	DUS4L	97	55.556	Ornithorhynchus_anatinus
ENSCING00000001869	-	96	54.882	ENSOCUG00000012784	DUS4L	94	54.882	Oryctolagus_cuniculus
ENSCING00000001869	-	97	53.177	ENSORLG00000008306	dus4l	93	53.177	Oryzias_latipes
ENSCING00000001869	-	97	53.512	ENSORLG00020020542	dus4l	93	53.512	Oryzias_latipes_hni
ENSCING00000001869	-	97	53.512	ENSORLG00015001648	dus4l	93	53.512	Oryzias_latipes_hsok
ENSCING00000001869	-	97	53.846	ENSOMEG00000017582	dus4l	95	53.846	Oryzias_melastigma
ENSCING00000001869	-	96	54.545	ENSOGAG00000013113	DUS4L	92	54.545	Otolemur_garnettii
ENSCING00000001869	-	96	55.556	ENSOARG00000005713	DUS4L	92	55.556	Ovis_aries
ENSCING00000001869	-	96	53.535	ENSPPAG00000031482	DUS4L	94	53.535	Pan_paniscus
ENSCING00000001869	-	96	54.209	ENSPPRG00000010523	DUS4L	94	54.209	Panthera_pardus
ENSCING00000001869	-	96	54.209	ENSPTIG00000005318	DUS4L	94	54.209	Panthera_tigris_altaica
ENSCING00000001869	-	96	53.535	ENSPTRG00000019579	DUS4L	94	53.535	Pan_troglodytes
ENSCING00000001869	-	96	53.872	ENSPANG00000007111	DUS4L	94	53.872	Papio_anubis
ENSCING00000001869	-	90	56.115	ENSPKIG00000016429	dus4l	96	48.148	Paramormyrops_kingsleyae
ENSCING00000001869	-	96	57.912	ENSPSIG00000013488	DUS4L	94	57.912	Pelodiscus_sinensis
ENSCING00000001869	-	96	55.034	ENSPMGG00000012731	dus4l	95	55.034	Periophthalmus_magnuspinnatus
ENSCING00000001869	-	96	56.566	ENSPEMG00000022807	Dus4l	94	56.566	Peromyscus_maniculatus_bairdii
ENSCING00000001869	-	98	54.276	ENSPCIG00000005163	DUS4L	99	53.488	Phascolarctos_cinereus
ENSCING00000001869	-	99	54.098	ENSPFOG00000004246	dus4l	96	54.098	Poecilia_formosa
ENSCING00000001869	-	97	54.817	ENSPLAG00000021398	dus4l	95	54.817	Poecilia_latipinna
ENSCING00000001869	-	99	54.098	ENSPMEG00000010911	dus4l	96	54.098	Poecilia_mexicana
ENSCING00000001869	-	97	55.150	ENSPREG00000021419	dus4l	95	55.150	Poecilia_reticulata
ENSCING00000001869	-	96	53.535	ENSPPYG00000017901	DUS4L	94	53.535	Pongo_abelii
ENSCING00000001869	-	71	58.228	ENSPCAG00000012668	-	69	58.228	Procavia_capensis
ENSCING00000001869	-	96	55.219	ENSPCOG00000015747	DUS4L	94	55.219	Propithecus_coquereli
ENSCING00000001869	-	96	43.434	ENSPVAG00000014548	DUS4L	93	43.434	Pteropus_vampyrus
ENSCING00000001869	-	89	54.545	ENSPNYG00000015730	dus4l	92	54.545	Pundamilia_nyererei
ENSCING00000001869	-	96	54.209	ENSPNAG00000021961	dus4l	98	54.209	Pygocentrus_nattereri
ENSCING00000001869	-	97	56.856	ENSRNOG00000008155	Dus4l	93	56.856	Rattus_norvegicus
ENSCING00000001869	-	96	53.872	ENSRBIG00000025544	DUS4L	94	53.872	Rhinopithecus_bieti
ENSCING00000001869	-	96	53.872	ENSRROG00000000241	DUS4L	94	53.872	Rhinopithecus_roxellana
ENSCING00000001869	-	95	38.462	YLR405W	-	81	38.462	Saccharomyces_cerevisiae
ENSCING00000001869	-	96	53.872	ENSSBOG00000025576	DUS4L	97	53.872	Saimiri_boliviensis_boliviensis
ENSCING00000001869	-	96	55.892	ENSSHAG00000012813	DUS4L	92	55.892	Sarcophilus_harrisii
ENSCING00000001869	-	96	56.376	ENSSFOG00015005943	dus4l	98	56.376	Scleropages_formosus
ENSCING00000001869	-	97	53.177	ENSSMAG00000018502	dus4l	94	53.177	Scophthalmus_maximus
ENSCING00000001869	-	85	53.053	ENSSDUG00000002389	dus4l	51	53.053	Seriola_dumerili
ENSCING00000001869	-	97	53.667	ENSSLDG00000008740	dus4l	97	53.667	Seriola_lalandi_dorsalis
ENSCING00000001869	-	93	58.333	ENSSPUG00000019140	DUS4L	91	58.333	Sphenodon_punctatus
ENSCING00000001869	-	96	55.034	ENSSPAG00000020826	dus4l	95	55.034	Stegastes_partitus
ENSCING00000001869	-	96	54.882	ENSSSCG00000028433	DUS4L	98	55.636	Sus_scrofa
ENSCING00000001869	-	96	57.912	ENSTGUG00000003124	DUS4L	94	57.912	Taeniopygia_guttata
ENSCING00000001869	-	96	55.556	ENSTRUG00000016285	dus4l	97	55.556	Takifugu_rubripes
ENSCING00000001869	-	96	42.424	ENSTBEG00000001401	DUS4L	94	42.424	Tupaia_belangeri
ENSCING00000001869	-	89	46.545	ENSTTRG00000006833	DUS4L	99	46.545	Tursiops_truncatus
ENSCING00000001869	-	96	54.882	ENSUMAG00000018230	DUS4L	94	54.882	Ursus_maritimus
ENSCING00000001869	-	96	54.882	ENSVPAG00000008640	DUS4L	94	54.882	Vicugna_pacos
ENSCING00000001869	-	96	54.882	ENSVVUG00000021846	DUS4L	94	54.882	Vulpes_vulpes
ENSCING00000001869	-	90	56.940	ENSXETG00000005925	dus4l	99	56.940	Xenopus_tropicalis
ENSCING00000001869	-	97	54.485	ENSXMAG00000008454	dus4l	97	54.485	Xiphophorus_maculatus