EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000001979 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: protein pelota homolog
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1155 bases
Position: chr8:6029119-6030273
Accession: 104265927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000003991	eRF1_2	PF03464.15	7e-34	1	1
ENSCINP00000003991	eRF1_3	PF03465.15	2.7e-22	1	1
ENSCINP00000003991	eRF1_1	PF03463.15	9.5e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000003991	-	1155	-	ENSCINP00000003991	384 (aa)	XP_009859396	F6X3S3

Gene Model

Click here to download ENSCING00000001979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000001979	-	100	69.610	ENSG00000152684	PELO	97	69.169	Homo_sapiens
ENSCING00000001979	-	64	67.206	ENSAPOG00000000616	pelo	90	67.206	Acanthochromis_polyacanthus
ENSCING00000001979	-	100	64.323	ENSAPOG00000023072	pelo	97	64.611	Acanthochromis_polyacanthus
ENSCING00000001979	-	64	67.206	ENSAPOG00000023700	-	90	67.206	Acanthochromis_polyacanthus
ENSCING00000001979	-	100	69.870	ENSAMEG00000007734	PELO	97	69.437	Ailuropoda_melanoleuca
ENSCING00000001979	-	97	59.517	ENSACIG00000014386	pelo	97	63.422	Amphilophus_citrinellus
ENSCING00000001979	-	100	64.583	ENSAOCG00000023717	pelo	97	64.879	Amphiprion_ocellaris
ENSCING00000001979	-	100	64.583	ENSAPEG00000011235	pelo	97	64.879	Amphiprion_percula
ENSCING00000001979	-	100	65.195	ENSATEG00000019550	pelo	97	65.147	Anabas_testudineus
ENSCING00000001979	-	77	60.738	ENSAPLG00000013265	PELO	96	59.790	Anas_platyrhynchos
ENSCING00000001979	-	98	66.933	ENSACAG00000004352	PELO	96	67.297	Anolis_carolinensis
ENSCING00000001979	-	100	69.610	ENSANAG00000014096	PELO	97	69.169	Aotus_nancymaae
ENSCING00000001979	-	100	64.935	ENSACLG00000010305	pelo	97	64.611	Astatotilapia_calliptera
ENSCING00000001979	-	97	64.611	ENSAMXG00000020299	pelo	97	64.611	Astyanax_mexicanus
ENSCING00000001979	-	100	68.831	ENSBTAG00000003268	PELO	97	68.365	Bos_taurus
ENSCING00000001979	-	98	53.600	WBGene00011280	pelo-1	98	53.619	Caenorhabditis_elegans
ENSCING00000001979	-	100	69.610	ENSCJAG00000035190	PELO	100	67.857	Callithrix_jacchus
ENSCING00000001979	-	100	69.870	ENSCAFG00020023234	PELO	97	69.437	Canis_lupus_dingo
ENSCING00000001979	-	100	69.091	ENSCHIG00000016410	PELO	97	68.633	Capra_hircus
ENSCING00000001979	-	100	68.571	ENSTSYG00000005203	PELO	97	68.097	Carlito_syrichta
ENSCING00000001979	-	100	69.610	ENSCPOG00000027406	PELO	97	69.169	Cavia_porcellus
ENSCING00000001979	-	100	69.610	ENSCCAG00000035600	PELO	100	67.857	Cebus_capucinus
ENSCING00000001979	-	100	69.351	ENSCATG00000011829	PELO	97	68.901	Cercocebus_atys
ENSCING00000001979	-	100	69.091	ENSCLAG00000005043	PELO	97	68.633	Chinchilla_lanigera
ENSCING00000001979	-	100	69.351	ENSCSAG00000016692	PELO	97	68.901	Chlorocebus_sabaeus
ENSCING00000001979	-	100	68.831	ENSCHOG00000000523	PELO	97	68.365	Choloepus_hoffmanni
ENSCING00000001979	-	98	68.000	ENSCPBG00000007544	PELO	97	67.828	Chrysemys_picta_bellii
ENSCING00000001979	-	100	90.365	ENSCSAVG00000006158	-	97	90.617	Ciona_savignyi
ENSCING00000001979	-	100	69.351	ENSCANG00000023382	PELO	97	68.901	Colobus_angolensis_palliatus
ENSCING00000001979	-	97	69.437	ENSCGRG00001024665	Pelo	97	69.437	Cricetulus_griseus_chok1gshd
ENSCING00000001979	-	97	70.241	ENSCGRG00000004570	Pelo	97	70.241	Cricetulus_griseus_crigri
ENSCING00000001979	-	100	63.636	ENSCSEG00000008807	pelo	97	63.539	Cynoglossus_semilaevis
ENSCING00000001979	-	100	65.455	ENSCVAG00000016082	pelo	97	65.147	Cyprinodon_variegatus
ENSCING00000001979	-	100	64.935	ENSDARG00000055477	pelo	96	65.676	Danio_rerio
ENSCING00000001979	-	96	68.919	ENSDNOG00000036721	PELO	93	68.436	Dasypus_novemcinctus
ENSCING00000001979	-	100	69.870	ENSDORG00000016689	Pelo	97	69.437	Dipodomys_ordii
ENSCING00000001979	-	97	64.690	FBgn0011207	pelo	94	64.343	Drosophila_melanogaster
ENSCING00000001979	-	71	71.345	ENSEBUG00000004955	pelo	95	71.345	Eptatretus_burgeri
ENSCING00000001979	-	100	68.831	ENSEASG00005013348	PELO	97	68.365	Equus_asinus_asinus
ENSCING00000001979	-	100	64.323	ENSELUG00000023229	pelo	98	64.789	Esox_lucius
ENSCING00000001979	-	100	69.351	ENSFCAG00000032341	PELO	97	68.901	Felis_catus
ENSCING00000001979	-	100	68.831	ENSFALG00000004559	PELO	96	68.919	Ficedula_albicollis
ENSCING00000001979	-	74	71.025	ENSFDAG00000002076	PELO	88	71.025	Fukomys_damarensis
ENSCING00000001979	-	100	65.195	ENSFHEG00000009769	pelo	96	65.909	Fundulus_heteroclitus
ENSCING00000001979	-	98	63.926	ENSGMOG00000005849	pelo	97	64.075	Gadus_morhua
ENSCING00000001979	-	100	64.675	ENSGAFG00000019350	pelo	97	64.611	Gambusia_affinis
ENSCING00000001979	-	100	64.935	ENSGACG00000007245	pelo	97	70.879	Gasterosteus_aculeatus
ENSCING00000001979	-	98	68.267	ENSGAGG00000004018	PELO	97	68.097	Gopherus_agassizii
ENSCING00000001979	-	100	69.351	ENSGGOG00000012635	PELO	97	68.901	Gorilla_gorilla
ENSCING00000001979	-	100	64.935	ENSHBUG00000005866	pelo	97	64.611	Haplochromis_burtoni
ENSCING00000001979	-	100	69.870	ENSHGLG00000005932	PELO	97	69.437	Heterocephalus_glaber_female
ENSCING00000001979	-	100	69.091	ENSHGLG00100017627	PELO	97	68.633	Heterocephalus_glaber_male
ENSCING00000001979	-	100	64.323	ENSHCOG00000016782	pelo	96	64.865	Hippocampus_comes
ENSCING00000001979	-	100	65.195	ENSIPUG00000020627	pelo	96	65.676	Ictalurus_punctatus
ENSCING00000001979	-	100	69.091	ENSSTOG00000027378	PELO	97	68.633	Ictidomys_tridecemlineatus
ENSCING00000001979	-	100	69.351	ENSJJAG00000015032	Pelo	97	68.901	Jaculus_jaculus
ENSCING00000001979	-	100	64.416	ENSKMAG00000021305	pelo	97	64.343	Kryptolebias_marmoratus
ENSCING00000001979	-	100	64.844	ENSLBEG00000022399	pelo	97	64.611	Labrus_bergylta
ENSCING00000001979	-	100	68.831	ENSLAFG00000020551	PELO	97	68.365	Loxodonta_africana
ENSCING00000001979	-	100	69.351	ENSMFAG00000000651	PELO	97	68.901	Macaca_fascicularis
ENSCING00000001979	-	100	69.351	ENSMMUG00000039101	PELO	97	68.901	Macaca_mulatta
ENSCING00000001979	-	100	69.351	ENSMNEG00000035538	PELO	97	68.901	Macaca_nemestrina
ENSCING00000001979	-	100	69.351	ENSMLEG00000039113	PELO	97	68.901	Mandrillus_leucophaeus
ENSCING00000001979	-	97	64.879	ENSMAMG00000013260	pelo	97	64.879	Mastacembelus_armatus
ENSCING00000001979	-	100	64.935	ENSMZEG00005014258	pelo	97	64.611	Maylandia_zebra
ENSCING00000001979	-	100	70.130	ENSMAUG00000009770	Pelo	97	69.705	Mesocricetus_auratus
ENSCING00000001979	-	100	68.571	ENSMICG00000044040	PELO	97	68.097	Microcebus_murinus
ENSCING00000001979	-	100	70.130	ENSMOCG00000017554	Pelo	97	69.705	Microtus_ochrogaster
ENSCING00000001979	-	100	64.323	ENSMMOG00000001324	pelo	96	65.135	Mola_mola
ENSCING00000001979	-	100	63.802	ENSMALG00000008194	pelo	97	64.343	Monopterus_albus
ENSCING00000001979	-	100	69.610	MGP_CAROLIEiJ_G0018915	Pelo	97	69.169	Mus_caroli
ENSCING00000001979	-	100	69.610	ENSMUSG00000042275	Pelo	97	69.169	Mus_musculus
ENSCING00000001979	-	100	69.870	MGP_PahariEiJ_G0015985	Pelo	97	69.437	Mus_pahari
ENSCING00000001979	-	100	69.610	MGP_SPRETEiJ_G0019793	Pelo	97	69.169	Mus_spretus
ENSCING00000001979	-	100	67.969	ENSMLUG00000024132	PELO	97	67.292	Myotis_lucifugus
ENSCING00000001979	-	100	69.610	ENSNGAG00000019331	Pelo	97	69.169	Nannospalax_galili
ENSCING00000001979	-	100	64.416	ENSNBRG00000011799	pelo	97	64.075	Neolamprologus_brichardi
ENSCING00000001979	-	100	69.351	ENSNLEG00000035970	PELO	97	68.901	Nomascus_leucogenys
ENSCING00000001979	-	100	68.052	ENSMEUG00000005468	PELO	97	67.828	Notamacropus_eugenii
ENSCING00000001979	-	98	67.725	ENSOPRG00000018793	PELO	98	67.838	Ochotona_princeps
ENSCING00000001979	-	100	70.130	ENSODEG00000017579	PELO	97	69.705	Octodon_degus
ENSCING00000001979	-	96	65.135	ENSONIG00000011511	pelo	97	64.611	Oreochromis_niloticus
ENSCING00000001979	-	100	68.831	ENSOCUG00000023902	PELO	97	68.365	Oryctolagus_cuniculus
ENSCING00000001979	-	100	63.117	ENSORLG00000005827	pelo	97	63.003	Oryzias_latipes
ENSCING00000001979	-	100	63.377	ENSORLG00020016456	pelo	97	63.271	Oryzias_latipes_hni
ENSCING00000001979	-	100	63.377	ENSORLG00015014447	pelo	97	63.793	Oryzias_latipes_hsok
ENSCING00000001979	-	100	64.156	ENSOMEG00000021567	pelo	97	64.075	Oryzias_melastigma
ENSCING00000001979	-	100	69.351	ENSOGAG00000027940	PELO	97	68.901	Otolemur_garnettii
ENSCING00000001979	-	100	68.831	ENSOARG00000008324	PELO	97	68.365	Ovis_aries
ENSCING00000001979	-	100	69.351	ENSPPAG00000038951	PELO	97	68.901	Pan_paniscus
ENSCING00000001979	-	100	69.351	ENSPPRG00000018800	PELO	97	68.901	Panthera_pardus
ENSCING00000001979	-	100	69.351	ENSPTIG00000019988	PELO	97	68.901	Panthera_tigris_altaica
ENSCING00000001979	-	100	69.351	ENSPTRG00000034409	PELO	97	68.901	Pan_troglodytes
ENSCING00000001979	-	100	69.351	ENSPANG00000010902	PELO	97	68.901	Papio_anubis
ENSCING00000001979	-	100	65.885	ENSPKIG00000015190	pelo	97	66.488	Paramormyrops_kingsleyae
ENSCING00000001979	-	98	68.800	ENSPSIG00000004971	PELO	97	68.633	Pelodiscus_sinensis
ENSCING00000001979	-	66	65.354	ENSPMGG00000014561	pelo	94	65.354	Periophthalmus_magnuspinnatus
ENSCING00000001979	-	100	69.610	ENSPEMG00000015584	Pelo	97	69.169	Peromyscus_maniculatus_bairdii
ENSCING00000001979	-	99	68.668	ENSPCIG00000004880	PELO	97	68.901	Phascolarctos_cinereus
ENSCING00000001979	-	100	65.195	ENSPFOG00000007277	pelo	97	64.879	Poecilia_formosa
ENSCING00000001979	-	100	65.195	ENSPLAG00000020787	pelo	97	64.879	Poecilia_latipinna
ENSCING00000001979	-	100	65.195	ENSPMEG00000016964	pelo	97	64.879	Poecilia_mexicana
ENSCING00000001979	-	100	65.195	ENSPREG00000023071	pelo	97	64.879	Poecilia_reticulata
ENSCING00000001979	-	97	68.633	ENSPPYG00000015451	PELO	93	68.633	Pongo_abelii
ENSCING00000001979	-	100	68.571	ENSPCOG00000021178	PELO	97	68.097	Propithecus_coquereli
ENSCING00000001979	-	100	64.935	ENSPNYG00000017325	pelo	97	64.611	Pundamilia_nyererei
ENSCING00000001979	-	97	65.952	ENSPNAG00000012458	pelo	97	65.952	Pygocentrus_nattereri
ENSCING00000001979	-	100	69.351	ENSRNOG00000061128	Pelo	97	68.901	Rattus_norvegicus
ENSCING00000001979	-	100	69.351	ENSRBIG00000007299	PELO	97	68.901	Rhinopithecus_bieti
ENSCING00000001979	-	100	69.351	ENSRROG00000035507	PELO	97	68.901	Rhinopithecus_roxellana
ENSCING00000001979	-	99	35.025	YNL001W	-	98	35.065	Saccharomyces_cerevisiae
ENSCING00000001979	-	100	69.870	ENSSBOG00000036140	PELO	97	69.437	Saimiri_boliviensis_boliviensis
ENSCING00000001979	-	63	66.393	ENSSHAG00000010770	PELO	95	65.948	Sarcophilus_harrisii
ENSCING00000001979	-	98	66.048	ENSSFOG00015013399	pelo	97	66.220	Scleropages_formosus
ENSCING00000001979	-	100	63.896	ENSSMAG00000017171	pelo	97	63.807	Scophthalmus_maximus
ENSCING00000001979	-	100	64.416	ENSSDUG00000022938	pelo	97	64.343	Seriola_dumerili
ENSCING00000001979	-	100	61.299	ENSSLDG00000017884	pelo	97	61.126	Seriola_lalandi_dorsalis
ENSCING00000001979	-	98	66.933	ENSSPUG00000005545	PELO	96	67.297	Sphenodon_punctatus
ENSCING00000001979	-	98	64.987	ENSSPAG00000008501	pelo	97	65.147	Stegastes_partitus
ENSCING00000001979	-	100	67.532	ENSSSCG00000016884	PELO	97	67.024	Sus_scrofa
ENSCING00000001979	-	100	68.571	ENSTGUG00000002416	PELO	97	68.097	Taeniopygia_guttata
ENSCING00000001979	-	100	64.935	ENSTRUG00000005809	pelo	97	64.879	Takifugu_rubripes
ENSCING00000001979	-	100	64.675	ENSTNIG00000018937	pelo	97	64.343	Tetraodon_nigroviridis
ENSCING00000001979	-	100	68.571	ENSTTRG00000001857	PELO	97	68.097	Tursiops_truncatus
ENSCING00000001979	-	100	69.610	ENSUAMG00000002535	PELO	97	69.169	Ursus_americanus
ENSCING00000001979	-	100	69.610	ENSUMAG00000005809	PELO	97	69.169	Ursus_maritimus
ENSCING00000001979	-	100	68.831	ENSVPAG00000001113	PELO	97	68.365	Vicugna_pacos
ENSCING00000001979	-	100	69.870	ENSVVUG00000025499	PELO	97	69.437	Vulpes_vulpes
ENSCING00000001979	-	80	66.775	ENSXETG00000018368	pelo	97	66.129	Xenopus_tropicalis
ENSCING00000001979	-	100	64.935	ENSXMAG00000018474	pelo	97	64.611	Xiphophorus_maculatus