EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000001999 (Gene tree)
Gene ID
100176847
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Minus strand
Length
10468 bases
Position
chr6:147420-157887
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000004047RRM_1PF00076.228.5e-5013
ENSCINP00000004047RRM_1PF00076.228.5e-5023
ENSCINP00000004047RRM_1PF00076.228.5e-5033
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000004047-1785-ENSCINP00000004047473 (aa)-F6WTG3
Gene Model
Click here to download ENSCING00000001999's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000001999's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000001999-9951.271ENSG00000140488CELF610052.604Homo_sapiens
ENSCING00000001999-9751.572ENSG00000161082CELF59251.782Homo_sapiens
ENSCING00000001999-7283.333ENSAPOG00000019202si:dkey-205h23.28183.333Acanthochromis_polyacanthus
ENSCING00000001999-9952.953ENSAPOG00000004445celf5a8952.314Acanthochromis_polyacanthus
ENSCING00000001999-9950.847ENSAMEG00000005985-9352.075Ailuropoda_melanoleuca
ENSCING00000001999-9752.654ENSAMEG00000005527CELF59152.654Ailuropoda_melanoleuca
ENSCING00000001999-7283.333ENSACIG00000003650si:dkey-205h23.28583.333Amphilophus_citrinellus
ENSCING00000001999-9753.066ENSACIG00000015357celf5a9452.818Amphilophus_citrinellus
ENSCING00000001999-7283.333ENSAOCG00000000908si:dkey-205h23.28183.333Amphiprion_ocellaris
ENSCING00000001999-7283.333ENSAPEG00000009237si:dkey-205h23.28183.333Amphiprion_percula
ENSCING00000001999-9950.497ENSAPEG00000007649celf5a8950.696Amphiprion_percula
ENSCING00000001999-9944.742ENSATEG00000024133celf5a9244.742Anabas_testudineus
ENSCING00000001999-9755.054ENSATEG00000002283si:dkey-205h23.29355.484Anabas_testudineus
ENSCING00000001999-9753.364ENSAPLG00000016374-9953.756Anas_platyrhynchos
ENSCING00000001999-9649.210ENSAPLG00000005174CELF510049.436Anas_platyrhynchos
ENSCING00000001999-9951.059ENSANAG00000025788-9550.653Aotus_nancymaae
ENSCING00000001999-9641.827ENSANAG00000024549CELF59740.868Aotus_nancymaae
ENSCING00000001999-9952.738ENSACLG00000023709celf5a8753.131Astatotilapia_calliptera
ENSCING00000001999-7283.333ENSACLG00000016215si:dkey-205h23.28183.333Astatotilapia_calliptera
ENSCING00000001999-9753.002ENSAMXG00000012028celf5b8153.814Astyanax_mexicanus
ENSCING00000001999-9753.428ENSAMXG00000033823si:dkey-205h23.28053.428Astyanax_mexicanus
ENSCING00000001999-9950.522ENSBTAG00000014092CELF69351.820Bos_taurus
ENSCING00000001999-5254.118WBGene00006807unc-7510044.575Caenorhabditis_elegans
ENSCING00000001999-9951.059ENSCJAG00000018355-10052.083Callithrix_jacchus
ENSCING00000001999-9751.572ENSCAFG00000019263CELF59251.782Canis_familiaris
ENSCING00000001999-9751.572ENSCAFG00020018264CELF59251.782Canis_lupus_dingo
ENSCING00000001999-10052.220ENSCAFG00020006479-9452.854Canis_lupus_dingo
ENSCING00000001999-9749.257ENSCAFG00020011161-9049.469Canis_lupus_dingo
ENSCING00000001999-9752.891ENSCHIG00000004008CELF59252.891Capra_hircus
ENSCING00000001999-9950.743ENSCHIG00000009150-7977.083Capra_hircus
ENSCING00000001999-9950.314ENSTSYG00000028781-10051.429Carlito_syrichta
ENSCING00000001999-5669.355ENSCAPG00000011214-9944.751Cavia_aperea
ENSCING00000001999-9749.392ENSCPOG00000025842-10051.574Cavia_porcellus
ENSCING00000001999-9952.034ENSCCAG00000023274-9352.891Cebus_capucinus
ENSCING00000001999-9951.483ENSCATG00000042282-10052.604Cercocebus_atys
ENSCING00000001999-7148.495ENSCLAG00000009940CELF58546.562Chinchilla_lanigera
ENSCING00000001999-9951.483ENSCSAG00000013785-9352.282Chlorocebus_sabaeus
ENSCING00000001999-9642.482ENSCSAG00000011210CELF510042.482Chlorocebus_sabaeus
ENSCING00000001999-9651.579ENSCPBG00000006359-9352.895Chrysemys_picta_bellii
ENSCING00000001999-9753.125ENSCPBG00000010903CELF58462.500Chrysemys_picta_bellii
ENSCING00000001999-9951.483ENSCANG00000038452-10052.604Colobus_angolensis_palliatus
ENSCING00000001999-9952.034ENSCGRG00001012872Celf69352.248Cricetulus_griseus_chok1gshd
ENSCING00000001999-9952.034ENSCGRG00000001688Celf69452.248Cricetulus_griseus_crigri
ENSCING00000001999-8044.538ENSCGRG00000003200-9544.538Cricetulus_griseus_crigri
ENSCING00000001999-9752.643ENSCSEG00000002800celf5a9453.066Cynoglossus_semilaevis
ENSCING00000001999-9753.347ENSCSEG00000007749si:dkey-205h23.29853.402Cynoglossus_semilaevis
ENSCING00000001999-9752.688ENSCVAG00000018670si:dkey-205h23.210046.275Cyprinodon_variegatus
ENSCING00000001999-8950.694ENSDARG00000101933si:dkey-205h23.29250.577Danio_rerio
ENSCING00000001999-9650.256ENSDARG00000090727celf5b10054.696Danio_rerio
ENSCING00000001999-9753.586ENSDARG00000071375celf5a8853.571Danio_rerio
ENSCING00000001999-6550.000ENSDNOG00000043624CELF59650.000Dasypus_novemcinctus
ENSCING00000001999-9863.768ENSDORG00000004882Celf69950.214Dipodomys_ordii
ENSCING00000001999-9649.877FBgn0264001bru39650.370Drosophila_melanogaster
ENSCING00000001999-5277.528ENSETEG00000016221-5177.528Echinops_telfairi
ENSCING00000001999-9753.234ENSEBUG00000011955CELF510053.234Eptatretus_burgeri
ENSCING00000001999-9647.297ENSEBUG00000009548CELF59548.168Eptatretus_burgeri
ENSCING00000001999-6547.773ENSEASG00005022118-9358.553Equus_asinus_asinus
ENSCING00000001999-9950.104ENSEASG00005005374-9351.852Equus_asinus_asinus
ENSCING00000001999-9752.110ENSECAG00000018055CELF59252.321Equus_caballus
ENSCING00000001999-5282.927ENSELUG00000024075-7482.927Esox_lucius
ENSCING00000001999-5283.333ENSELUG00000016378si:dkey-205h23.29245.435Esox_lucius
ENSCING00000001999-9752.807ENSELUG00000007383celf5b9251.760Esox_lucius
ENSCING00000001999-9753.958ENSELUG00000018986celf5a9653.542Esox_lucius
ENSCING00000001999-9950.847ENSFCAG00000016249-10052.604Felis_catus
ENSCING00000001999-9751.363ENSFCAG00000007127CELF59251.572Felis_catus
ENSCING00000001999-9754.565ENSFALG00000009584-9354.915Ficedula_albicollis
ENSCING00000001999-8750.930ENSFALG00000013886CELF59651.395Ficedula_albicollis
ENSCING00000001999-9749.497ENSFDAG00000001528-10050.754Fukomys_damarensis
ENSCING00000001999-7147.987ENSFDAG00000014290CELF58547.987Fukomys_damarensis
ENSCING00000001999-7283.333ENSFHEG00000023111-8483.333Fundulus_heteroclitus
ENSCING00000001999-9952.556ENSFHEG00000012816celf5a9652.632Fundulus_heteroclitus
ENSCING00000001999-9750.249ENSGMOG00000003903-10050.614Gadus_morhua
ENSCING00000001999-6969.744ENSGALG00000026716CELF58049.655Gallus_gallus
ENSCING00000001999-9951.245ENSGALG00000031313-9549.898Gallus_gallus
ENSCING00000001999-9952.720ENSGAFG00000002765celf5a8953.138Gambusia_affinis
ENSCING00000001999-7283.333ENSGAFG00000010304si:dkey-205h23.28183.333Gambusia_affinis
ENSCING00000001999-7847.277ENSGACG00000012870celf5a10047.277Gasterosteus_aculeatus
ENSCING00000001999-9751.759ENSGACG00000016626si:dkey-205h23.210052.882Gasterosteus_aculeatus
ENSCING00000001999-9652.717ENSGAGG00000010368-8352.632Gopherus_agassizii
ENSCING00000001999-9951.271ENSGGOG00000015463-10052.604Gorilla_gorilla
ENSCING00000001999-9953.170ENSHBUG00000006465celf5a9652.653Haplochromis_burtoni
ENSCING00000001999-7283.333ENSHBUG00000001878si:dkey-205h23.28183.333Haplochromis_burtoni
ENSCING00000001999-7148.322ENSHGLG00000008605CELF58848.322Heterocephalus_glaber_female
ENSCING00000001999-9951.812ENSHGLG00000014655-9352.878Heterocephalus_glaber_female
ENSCING00000001999-9752.174ENSHGLG00100018221-9153.382Heterocephalus_glaber_male
ENSCING00000001999-7146.494ENSHGLG00100016697CELF58946.494Heterocephalus_glaber_male
ENSCING00000001999-5283.333ENSHCOG00000021105si:dkey-205h23.28383.333Hippocampus_comes
ENSCING00000001999-6251.370ENSHCOG00000000056celf5a7351.370Hippocampus_comes
ENSCING00000001999-9753.895ENSIPUG00000000913celf58554.412Ictalurus_punctatus
ENSCING00000001999-9752.905ENSIPUG00000017915celf5b8653.719Ictalurus_punctatus
ENSCING00000001999-5283.333ENSIPUG00000010527si:dkey-205h23.28183.333Ictalurus_punctatus
ENSCING00000001999-9952.248ENSSTOG00000019540-9552.677Ictidomys_tridecemlineatus
ENSCING00000001999-7148.485ENSSTOG00000002384CELF57748.485Ictidomys_tridecemlineatus
ENSCING00000001999-9952.034ENSJJAG00000016114Celf610052.332Jaculus_jaculus
ENSCING00000001999-9754.357ENSKMAG00000017307si:dkey-205h23.29354.852Kryptolebias_marmoratus
ENSCING00000001999-9952.535ENSKMAG00000003744celf5a9449.087Kryptolebias_marmoratus
ENSCING00000001999-9753.165ENSLBEG00000016733celf5a8453.236Labrus_bergylta
ENSCING00000001999-9753.527ENSLBEG00000011338si:dkey-205h23.28583.333Labrus_bergylta
ENSCING00000001999-9650.129ENSLACG00000007987CELF510050.129Latimeria_chalumnae
ENSCING00000001999-9751.815ENSLOCG00000005481celf5a10052.130Lepisosteus_oculatus
ENSCING00000001999-9752.956ENSLOCG00000015141si:dkey-205h23.210053.071Lepisosteus_oculatus
ENSCING00000001999-9948.536ENSLAFG00000020985-10046.640Loxodonta_africana
ENSCING00000001999-8740.426ENSLAFG00000026387CELF510040.235Loxodonta_africana
ENSCING00000001999-9951.483ENSMFAG00000002682-10052.604Macaca_fascicularis
ENSCING00000001999-9751.562ENSMMUG00000010687CELF610052.604Macaca_mulatta
ENSCING00000001999-9951.483ENSMNEG00000033740-10052.604Macaca_nemestrina
ENSCING00000001999-9851.606ENSMLEG00000012695-10052.604Mandrillus_leucophaeus
ENSCING00000001999-9952.263ENSMAMG00000019440celf5a9452.342Mastacembelus_armatus
ENSCING00000001999-7283.333ENSMAMG00000003343-8583.333Mastacembelus_armatus
ENSCING00000001999-9952.535ENSMZEG00005007211celf5a9652.449Maylandia_zebra
ENSCING00000001999-7283.333ENSMZEG00005007126si:dkey-205h23.28183.333Maylandia_zebra
ENSCING00000001999-9648.292ENSMGAG00000001169CELF510048.747Meleagris_gallopavo
ENSCING00000001999-9250.964ENSMGAG00000001804-10051.389Meleagris_gallopavo
ENSCING00000001999-9951.392ENSMAUG00000012641Celf69352.034Mesocricetus_auratus
ENSCING00000001999-9751.782ENSMICG00000003506CELF59251.992Microcebus_murinus
ENSCING00000001999-9951.168ENSMICG00000027918-10052.083Microcebus_murinus
ENSCING00000001999-9951.380ENSMOCG00000002573Celf69352.677Microtus_ochrogaster
ENSCING00000001999-5283.333ENSMMOG00000016498si:dkey-205h23.28283.333Mola_mola
ENSCING00000001999-9751.667ENSMMOG00000000550celf5a9052.083Mola_mola
ENSCING00000001999-9752.123ENSMODG00000001784-9152.830Monodelphis_domestica
ENSCING00000001999-9952.469ENSMALG00000017703celf5a9652.352Monopterus_albus
ENSCING00000001999-9755.269ENSMALG00000012778-9355.269Monopterus_albus
ENSCING00000001999-9751.261MGP_CAROLIEiJ_G0015643-9368.605Mus_caroli
ENSCING00000001999-9750.260ENSMUSG00000032297Celf610051.562Mus_musculus
ENSCING00000001999-9950.943MGP_PahariEiJ_G0015171Celf69352.034Mus_pahari
ENSCING00000001999-9751.050MGP_PahariEiJ_G0031056-9367.442Mus_pahari
ENSCING00000001999-9750.260MGP_SPRETEiJ_G0033445Celf610051.562Mus_spretus
ENSCING00000001999-9950.847ENSMPUG00000017153-9952.075Mustela_putorius_furo
ENSCING00000001999-9650.583ENSMPUG00000003723CELF510050.816Mustela_putorius_furo
ENSCING00000001999-9947.844ENSMLUG00000030643-9348.988Myotis_lucifugus
ENSCING00000001999-9753.277ENSNBRG00000011418celf5a9453.277Neolamprologus_brichardi
ENSCING00000001999-7283.333ENSNBRG00000010105si:dkey-205h23.28583.333Neolamprologus_brichardi
ENSCING00000001999-9952.248ENSNLEG00000013917-9353.105Nomascus_leucogenys
ENSCING00000001999-7580.488ENSMEUG00000010988-7480.488Notamacropus_eugenii
ENSCING00000001999-9648.925ENSOPRG00000019169-10050.000Ochotona_princeps
ENSCING00000001999-9751.782ENSODEG00000014460CELF59251.992Octodon_degus
ENSCING00000001999-9754.357ENSONIG00000002755si:dkey-205h23.210049.637Oreochromis_niloticus
ENSCING00000001999-9953.374ENSONIG00000004856celf5a10047.356Oreochromis_niloticus
ENSCING00000001999-9654.651ENSOANG00000011308-10053.953Ornithorhynchus_anatinus
ENSCING00000001999-7283.333ENSORLG00000013392si:dkey-205h23.28583.333Oryzias_latipes
ENSCING00000001999-9952.546ENSORLG00000004600celf5a9450.309Oryzias_latipes
ENSCING00000001999-7283.333ENSORLG00020021262si:dkey-205h23.28583.333Oryzias_latipes_hni
ENSCING00000001999-9952.227ENSORLG00020003560celf5a8952.727Oryzias_latipes_hni
ENSCING00000001999-9953.061ENSORLG00015021594celf5a8947.119Oryzias_latipes_hsok
ENSCING00000001999-7283.333ENSORLG00015019715si:dkey-205h23.28583.333Oryzias_latipes_hsok
ENSCING00000001999-9752.688ENSOMEG00000019511celf5a8951.967Oryzias_melastigma
ENSCING00000001999-7283.333ENSOMEG00000015364si:dkey-205h23.28483.333Oryzias_melastigma
ENSCING00000001999-9751.674ENSOGAG00000014161CELF59251.883Otolemur_garnettii
ENSCING00000001999-9950.427ENSOGAG00000031801-9351.374Otolemur_garnettii
ENSCING00000001999-8848.624ENSOARG00000012757CELF59148.853Ovis_aries
ENSCING00000001999-9951.068ENSPPAG00000042321-10052.604Pan_paniscus
ENSCING00000001999-9950.847ENSPPRG00000021783-10052.604Panthera_pardus
ENSCING00000001999-8848.736ENSPPRG00000001514CELF58448.966Panthera_pardus
ENSCING00000001999-8238.350ENSPTIG00000005338CELF58838.499Panthera_tigris_altaica
ENSCING00000001999-9951.271ENSPTRG00000034360-10052.604Pan_troglodytes
ENSCING00000001999-9751.572ENSPTRG00000010259CELF59251.782Pan_troglodytes
ENSCING00000001999-9751.572ENSPANG00000012739CELF59251.782Papio_anubis
ENSCING00000001999-9951.483ENSPANG00000016205-10052.604Papio_anubis
ENSCING00000001999-9753.926ENSPKIG00000019554-9183.333Paramormyrops_kingsleyae
ENSCING00000001999-9752.556ENSPKIG00000004198si:dkey-205h23.29352.846Paramormyrops_kingsleyae
ENSCING00000001999-9954.564ENSPKIG00000010998celf5a8854.639Paramormyrops_kingsleyae
ENSCING00000001999-9752.152ENSPSIG00000010951-10052.658Pelodiscus_sinensis
ENSCING00000001999-9752.621ENSPSIG00000005317CELF59253.015Pelodiscus_sinensis
ENSCING00000001999-9749.476ENSPMGG00000021875si:dkey-205h23.29249.476Periophthalmus_magnuspinnatus
ENSCING00000001999-9952.463ENSPEMG00000013842Celf69352.677Peromyscus_maniculatus_bairdii
ENSCING00000001999-9753.145ENSPCIG00000016305-10051.768Phascolarctos_cinereus
ENSCING00000001999-10051.815ENSPCIG00000027126CELF59552.941Phascolarctos_cinereus
ENSCING00000001999-9952.535ENSPFOG00000003329celf5a8952.505Poecilia_formosa
ENSCING00000001999-9754.357ENSPFOG00000016467si:dkey-205h23.29354.321Poecilia_formosa
ENSCING00000001999-9652.455ENSPLAG00000017418-10052.196Poecilia_latipinna
ENSCING00000001999-9754.357ENSPREG00000005911si:dkey-205h23.29354.321Poecilia_reticulata
ENSCING00000001999-9952.227ENSPREG00000008235celf5a8952.305Poecilia_reticulata
ENSCING00000001999-9961.905ENSPPYG00000006615-9346.695Pongo_abelii
ENSCING00000001999-9648.832ENSPCAG00000002170CELF510049.533Procavia_capensis
ENSCING00000001999-5573.529ENSPCAG00000001078-5360.938Procavia_capensis
ENSCING00000001999-9650.583ENSPCOG00000011528CELF510050.816Propithecus_coquereli
ENSCING00000001999-9951.606ENSPCOG00000018535-9352.564Propithecus_coquereli
ENSCING00000001999-9951.059ENSPVAG00000006406-9351.867Pteropus_vampyrus
ENSCING00000001999-7283.333ENSPNYG00000011474si:dkey-205h23.28183.333Pundamilia_nyererei
ENSCING00000001999-9752.854ENSPNYG00000017486celf5a9453.263Pundamilia_nyererei
ENSCING00000001999-9753.416ENSPNAG00000027369celf5b8254.227Pygocentrus_nattereri
ENSCING00000001999-9754.507ENSPNAG00000029884si:dkey-205h23.28583.333Pygocentrus_nattereri
ENSCING00000001999-9953.074ENSPNAG00000002106celf5a8553.783Pygocentrus_nattereri
ENSCING00000001999-9951.483ENSRBIG00000037161-10052.604Rhinopithecus_bieti
ENSCING00000001999-9650.583ENSRROG00000032625CELF58250.816Rhinopithecus_roxellana
ENSCING00000001999-9952.463ENSRROG00000038113-9353.319Rhinopithecus_roxellana
ENSCING00000001999-9952.034ENSSBOG00000020965-9952.891Saimiri_boliviensis_boliviensis
ENSCING00000001999-7846.154ENSSHAG00000008823CELF510047.458Sarcophilus_harrisii
ENSCING00000001999-9752.903ENSSFOG00015010315celf5b9753.548Scleropages_formosus
ENSCING00000001999-9753.942ENSSFOG00015002593-9355.839Scleropages_formosus
ENSCING00000001999-9754.507ENSSFOG00015016756-9355.484Scleropages_formosus
ENSCING00000001999-9754.077ENSSFOG00015004376celf5a9454.506Scleropages_formosus
ENSCING00000001999-9952.535ENSSMAG00000011707celf5a9652.236Scophthalmus_maximus
ENSCING00000001999-9754.357ENSSMAG00000008575-8483.333Scophthalmus_maximus
ENSCING00000001999-7283.333ENSSDUG00000005607si:dkey-205h23.28183.333Seriola_dumerili
ENSCING00000001999-9949.383ENSSDUG00000004977celf5a9449.184Seriola_dumerili
ENSCING00000001999-9752.495ENSSDUG00000022650-9054.212Seriola_dumerili
ENSCING00000001999-9754.357ENSSLDG00000015995-9354.852Seriola_lalandi_dorsalis
ENSCING00000001999-9952.429ENSSLDG00000009847celf5a8952.505Seriola_lalandi_dorsalis
ENSCING00000001999-9750.763ENSSPUG00000008621-9150.743Sphenodon_punctatus
ENSCING00000001999-9753.015ENSSPUG00000009687CELF59453.222Sphenodon_punctatus
ENSCING00000001999-9651.812ENSSPAG00000013689si:dkey-205h23.29951.812Stegastes_partitus
ENSCING00000001999-9954.008ENSSPAG00000021838celf5a9654.008Stegastes_partitus
ENSCING00000001999-9752.802ENSSSCG00000013476CELF59251.992Sus_scrofa
ENSCING00000001999-9950.743ENSSSCG00000001928-9352.017Sus_scrofa
ENSCING00000001999-8750.930ENSTGUG00000000514CELF510051.628Taeniopygia_guttata
ENSCING00000001999-9746.479ENSTGUG00000004278-10047.045Taeniopygia_guttata
ENSCING00000001999-5283.333ENSTRUG00000012391si:dkey-205h23.28383.333Takifugu_rubripes
ENSCING00000001999-9753.178ENSTRUG00000017937celf5a9953.249Takifugu_rubripes
ENSCING00000001999-9647.507ENSTNIG00000010634celf5a10047.368Tetraodon_nigroviridis
ENSCING00000001999-9650.350ENSTTRG00000009625CELF510050.583Tursiops_truncatus
ENSCING00000001999-6264.767ENSTTRG00000002503-9344.628Tursiops_truncatus
ENSCING00000001999-9753.664ENSUAMG00000027174CELF59253.664Ursus_americanus
ENSCING00000001999-5583.333ENSVPAG00000002850-7783.333Vicugna_pacos
ENSCING00000001999-9750.638ENSXETG00000014344celf59550.638Xenopus_tropicalis
ENSCING00000001999-9650.777ENSXCOG00000008353si:dkey-205h23.29951.295Xiphophorus_couchianus
ENSCING00000001999-7283.333ENSXMAG00000018769si:dkey-205h23.28583.333Xiphophorus_maculatus
ENSCING00000001999-9952.535ENSXMAG00000026192celf5a8952.610Xiphophorus_maculatus

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