EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002018 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 11911 bases
Position: chr2:4964145-4976055
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000004081	DEAD	PF00270.29	4.4e-14	1	1
ENSCINP00000004081	HA2	PF04408.23	1.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000004081	-	2225	-	ENSCINP00000004081	534 (aa)	-	F6W6K0

Gene Model

Click here to download ENSCING00000002018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002018	-	98	67.822	ENSG00000174953	DHX36	92	65.455	Homo_sapiens
ENSCING00000002018	-	99	63.810	ENSAPOG00000022391	dhx36	52	67.204	Acanthochromis_polyacanthus
ENSCING00000002018	-	98	67.327	ENSAMEG00000011721	DHX36	52	67.327	Ailuropoda_melanoleuca
ENSCING00000002018	-	98	64.851	ENSACIG00000016290	dhx36	60	64.851	Amphilophus_citrinellus
ENSCING00000002018	-	99	63.333	ENSAOCG00000000046	dhx36	51	63.333	Amphiprion_ocellaris
ENSCING00000002018	-	99	63.333	ENSAPEG00000001495	dhx36	50	63.333	Amphiprion_percula
ENSCING00000002018	-	99	65.196	ENSATEG00000015441	dhx36	62	64.039	Anabas_testudineus
ENSCING00000002018	-	98	66.176	ENSAPLG00000012597	DHX36	57	66.176	Anas_platyrhynchos
ENSCING00000002018	-	97	55.352	ENSACAG00000006905	DHX36	52	55.352	Anolis_carolinensis
ENSCING00000002018	-	98	67.822	ENSANAG00000020741	DHX36	57	67.822	Aotus_nancymaae
ENSCING00000002018	-	99	65.196	ENSACLG00000014163	dhx36	56	67.204	Astatotilapia_calliptera
ENSCING00000002018	-	99	65.877	ENSAMXG00000017365	dhx36	59	65.877	Astyanax_mexicanus
ENSCING00000002018	-	98	67.822	ENSBTAG00000006142	DHX36	54	67.822	Bos_taurus
ENSCING00000002018	-	98	67.822	ENSCJAG00000000986	DHX36	52	67.822	Callithrix_jacchus
ENSCING00000002018	-	98	67.822	ENSCAFG00020004966	DHX36	64	68.229	Canis_lupus_dingo
ENSCING00000002018	-	98	67.822	ENSCHIG00000017463	DHX36	54	67.822	Capra_hircus
ENSCING00000002018	-	100	65.258	ENSTSYG00000002377	DHX36	53	65.258	Carlito_syrichta
ENSCING00000002018	-	80	47.951	ENSCAPG00000006238	DHX36	57	47.951	Cavia_aperea
ENSCING00000002018	-	98	67.822	ENSCCAG00000035199	DHX36	51	67.822	Cebus_capucinus
ENSCING00000002018	-	98	67.822	ENSCATG00000037545	DHX36	52	67.822	Cercocebus_atys
ENSCING00000002018	-	98	64.516	ENSCLAG00000003610	DHX36	53	64.516	Chinchilla_lanigera
ENSCING00000002018	-	98	67.822	ENSCSAG00000011962	DHX36	52	67.822	Chlorocebus_sabaeus
ENSCING00000002018	-	98	58.416	ENSCHOG00000002340	DHX36	56	58.416	Choloepus_hoffmanni
ENSCING00000002018	-	96	65.842	ENSCPBG00000018783	DHX36	54	65.842	Chrysemys_picta_bellii
ENSCING00000002018	-	99	79.938	ENSCSAVG00000008110	-	66	79.938	Ciona_savignyi
ENSCING00000002018	-	98	64.516	ENSCANG00000040120	DHX36	53	64.516	Colobus_angolensis_palliatus
ENSCING00000002018	-	98	64.516	ENSCGRG00001013722	Dhx36	53	64.516	Cricetulus_griseus_chok1gshd
ENSCING00000002018	-	98	64.516	ENSCGRG00000005229	Dhx36	54	64.516	Cricetulus_griseus_crigri
ENSCING00000002018	-	99	57.759	ENSCSEG00000013424	dhx36	52	57.759	Cynoglossus_semilaevis
ENSCING00000002018	-	99	64.762	ENSDARG00000101059	dhx36	52	64.762	Danio_rerio
ENSCING00000002018	-	98	51.376	ENSDNOG00000001682	DHX36	52	51.376	Dasypus_novemcinctus
ENSCING00000002018	-	98	66.832	ENSDORG00000004848	Dhx36	55	66.832	Dipodomys_ordii
ENSCING00000002018	-	97	52.000	FBgn0032883	Rhau	55	52.000	Drosophila_melanogaster
ENSCING00000002018	-	82	52.234	ENSEBUG00000005040	-	60	52.234	Eptatretus_burgeri
ENSCING00000002018	-	99	66.190	ENSEASG00005020682	DHX36	52	66.190	Equus_asinus_asinus
ENSCING00000002018	-	99	54.966	ENSECAG00000025100	DHX36	57	54.966	Equus_caballus
ENSCING00000002018	-	98	67.327	ENSEEUG00000010430	DHX36	54	67.327	Erinaceus_europaeus
ENSCING00000002018	-	100	63.850	ENSELUG00000009181	dhx36	55	65.969	Esox_lucius
ENSCING00000002018	-	98	67.327	ENSFCAG00000004860	DHX36	52	67.327	Felis_catus
ENSCING00000002018	-	96	67.327	ENSFALG00000005045	DHX36	57	67.327	Ficedula_albicollis
ENSCING00000002018	-	99	62.667	ENSFDAG00000005896	DHX36	53	64.516	Fukomys_damarensis
ENSCING00000002018	-	99	65.854	ENSFHEG00000000896	dhx36	50	65.854	Fundulus_heteroclitus
ENSCING00000002018	-	98	64.000	ENSGMOG00000013947	dhx36	54	64.000	Gadus_morhua
ENSCING00000002018	-	98	66.832	ENSGALG00000043082	DHX36	53	66.832	Gallus_gallus
ENSCING00000002018	-	99	63.333	ENSGAFG00000013829	dhx36	58	63.333	Gambusia_affinis
ENSCING00000002018	-	99	62.857	ENSGACG00000010276	dhx36	52	62.857	Gasterosteus_aculeatus
ENSCING00000002018	-	96	66.337	ENSGAGG00000000294	DHX36	56	66.337	Gopherus_agassizii
ENSCING00000002018	-	98	67.822	ENSGGOG00000034937	DHX36	52	67.822	Gorilla_gorilla
ENSCING00000002018	-	99	65.196	ENSHBUG00000015199	dhx36	57	67.204	Haplochromis_burtoni
ENSCING00000002018	-	99	65.238	ENSHGLG00000017407	DHX36	52	65.238	Heterocephalus_glaber_female
ENSCING00000002018	-	99	65.238	ENSHGLG00100003204	DHX36	53	65.238	Heterocephalus_glaber_male
ENSCING00000002018	-	99	66.667	ENSHCOG00000003686	dhx36	55	66.667	Hippocampus_comes
ENSCING00000002018	-	96	52.741	ENSIPUG00000010835	dhx36	58	51.460	Ictalurus_punctatus
ENSCING00000002018	-	98	67.327	ENSSTOG00000003917	DHX36	53	67.327	Ictidomys_tridecemlineatus
ENSCING00000002018	-	98	67.327	ENSJJAG00000014564	Dhx36	53	67.327	Jaculus_jaculus
ENSCING00000002018	-	99	64.286	ENSKMAG00000019498	dhx36	57	67.742	Kryptolebias_marmoratus
ENSCING00000002018	-	100	66.509	ENSLACG00000016218	DHX36	55	66.509	Latimeria_chalumnae
ENSCING00000002018	-	98	69.307	ENSLOCG00000002125	dhx36	54	69.307	Lepisosteus_oculatus
ENSCING00000002018	-	98	66.832	ENSLAFG00000015342	DHX36	53	66.832	Loxodonta_africana
ENSCING00000002018	-	98	67.822	ENSMFAG00000032288	DHX36	52	67.822	Macaca_fascicularis
ENSCING00000002018	-	98	67.822	ENSMMUG00000011347	DHX36	52	67.822	Macaca_mulatta
ENSCING00000002018	-	98	67.822	ENSMNEG00000039762	DHX36	52	67.822	Macaca_nemestrina
ENSCING00000002018	-	98	67.822	ENSMLEG00000032839	DHX36	52	67.822	Mandrillus_leucophaeus
ENSCING00000002018	-	93	64.356	ENSMAMG00000013131	dhx36	57	64.356	Mastacembelus_armatus
ENSCING00000002018	-	99	65.196	ENSMZEG00005001607	dhx36	57	67.027	Maylandia_zebra
ENSCING00000002018	-	98	66.176	ENSMGAG00000010853	DHX36	61	66.176	Meleagris_gallopavo
ENSCING00000002018	-	98	68.317	ENSMAUG00000000158	Dhx36	53	68.317	Mesocricetus_auratus
ENSCING00000002018	-	98	67.327	ENSMICG00000049093	DHX36	52	67.327	Microcebus_murinus
ENSCING00000002018	-	98	68.317	ENSMOCG00000006684	Dhx36	52	68.317	Microtus_ochrogaster
ENSCING00000002018	-	95	66.129	ENSMMOG00000013033	dhx36	56	66.129	Mola_mola
ENSCING00000002018	-	99	65.421	ENSMODG00000015820	DHX36	53	65.421	Monodelphis_domestica
ENSCING00000002018	-	99	53.644	ENSMALG00000010405	dhx36	50	53.644	Monopterus_albus
ENSCING00000002018	-	98	67.327	MGP_CAROLIEiJ_G0025032	Dhx36	53	67.327	Mus_caroli
ENSCING00000002018	-	98	67.327	ENSMUSG00000027770	Dhx36	52	67.327	Mus_musculus
ENSCING00000002018	-	98	63.594	MGP_PahariEiJ_G0026476	Dhx36	53	63.594	Mus_pahari
ENSCING00000002018	-	98	67.327	MGP_SPRETEiJ_G0025972	Dhx36	54	67.327	Mus_spretus
ENSCING00000002018	-	98	67.327	ENSMPUG00000002723	DHX36	52	67.327	Mustela_putorius_furo
ENSCING00000002018	-	98	67.327	ENSMLUG00000002318	DHX36	52	67.327	Myotis_lucifugus
ENSCING00000002018	-	98	66.832	ENSNGAG00000015307	Dhx36	52	66.832	Nannospalax_galili
ENSCING00000002018	-	95	67.204	ENSNBRG00000002239	dhx36	57	67.204	Neolamprologus_brichardi
ENSCING00000002018	-	98	67.822	ENSNLEG00000003640	DHX36	52	67.822	Nomascus_leucogenys
ENSCING00000002018	-	98	67.822	ENSODEG00000000935	DHX36	52	67.822	Octodon_degus
ENSCING00000002018	-	99	63.810	ENSONIG00000003546	dhx36	52	63.810	Oreochromis_niloticus
ENSCING00000002018	-	99	64.953	ENSOANG00000007079	-	57	64.953	Ornithorhynchus_anatinus
ENSCING00000002018	-	98	67.327	ENSOCUG00000001180	DHX36	52	67.327	Oryctolagus_cuniculus
ENSCING00000002018	-	99	65.686	ENSORLG00000005842	dhx36	61	65.025	Oryzias_latipes
ENSCING00000002018	-	99	65.686	ENSORLG00020004665	dhx36	61	65.025	Oryzias_latipes_hni
ENSCING00000002018	-	99	65.686	ENSORLG00015007188	dhx36	55	67.742	Oryzias_latipes_hsok
ENSCING00000002018	-	99	64.706	ENSOMEG00000011032	dhx36	50	64.706	Oryzias_melastigma
ENSCING00000002018	-	98	64.516	ENSOGAG00000011256	DHX36	53	64.516	Otolemur_garnettii
ENSCING00000002018	-	98	67.822	ENSOARG00000003508	DHX36	51	67.822	Ovis_aries
ENSCING00000002018	-	100	65.566	ENSPPAG00000020323	DHX36	53	65.566	Pan_paniscus
ENSCING00000002018	-	98	66.832	ENSPPRG00000002879	DHX36	52	66.832	Panthera_pardus
ENSCING00000002018	-	98	67.327	ENSPTIG00000018478	DHX36	54	67.327	Panthera_tigris_altaica
ENSCING00000002018	-	98	67.822	ENSPTRG00000015548	DHX36	52	67.822	Pan_troglodytes
ENSCING00000002018	-	98	67.822	ENSPANG00000007914	DHX36	52	67.822	Papio_anubis
ENSCING00000002018	-	98	66.667	ENSPKIG00000009943	dhx36	61	67.742	Paramormyrops_kingsleyae
ENSCING00000002018	-	96	66.337	ENSPSIG00000012755	DHX36	58	66.337	Pelodiscus_sinensis
ENSCING00000002018	-	98	62.981	ENSPMGG00000013858	dhx36	59	62.981	Periophthalmus_magnuspinnatus
ENSCING00000002018	-	98	68.317	ENSPEMG00000010012	Dhx36	52	68.317	Peromyscus_maniculatus_bairdii
ENSCING00000002018	-	93	67.241	ENSPMAG00000004056	-	88	67.241	Petromyzon_marinus
ENSCING00000002018	-	98	66.832	ENSPCIG00000000045	DHX36	52	66.832	Phascolarctos_cinereus
ENSCING00000002018	-	99	63.810	ENSPFOG00000009598	dhx36	50	63.810	Poecilia_formosa
ENSCING00000002018	-	99	63.810	ENSPLAG00000011061	dhx36	50	63.810	Poecilia_latipinna
ENSCING00000002018	-	99	63.333	ENSPMEG00000008396	dhx36	50	63.333	Poecilia_mexicana
ENSCING00000002018	-	99	63.333	ENSPREG00000002966	dhx36	50	63.333	Poecilia_reticulata
ENSCING00000002018	-	97	69.192	ENSPPYG00000014222	-	64	69.192	Pongo_abelii
ENSCING00000002018	-	84	67.708	ENSPCOG00000011695	-	59	67.708	Propithecus_coquereli
ENSCING00000002018	-	98	67.822	ENSPCOG00000028384	-	69	66.667	Propithecus_coquereli
ENSCING00000002018	-	96	64.055	ENSPVAG00000008465	DHX36	54	64.055	Pteropus_vampyrus
ENSCING00000002018	-	99	49.265	ENSPNYG00000007679	dhx36	55	48.909	Pundamilia_nyererei
ENSCING00000002018	-	98	68.317	ENSPNAG00000013972	dhx36	51	68.317	Pygocentrus_nattereri
ENSCING00000002018	-	98	67.327	ENSRNOG00000014599	Dhx36	53	67.327	Rattus_norvegicus
ENSCING00000002018	-	98	49.829	ENSRBIG00000044638	DHX36	57	49.829	Rhinopithecus_bieti
ENSCING00000002018	-	98	64.516	ENSRROG00000036472	DHX36	58	64.516	Rhinopithecus_roxellana
ENSCING00000002018	-	98	67.327	ENSSBOG00000024666	DHX36	52	67.327	Saimiri_boliviensis_boliviensis
ENSCING00000002018	-	97	65.421	ENSSHAG00000016292	DHX36	56	65.421	Sarcophilus_harrisii
ENSCING00000002018	-	99	66.190	ENSSFOG00015019533	dhx36	57	69.355	Scleropages_formosus
ENSCING00000002018	-	99	64.286	ENSSMAG00000011914	dhx36	53	67.380	Scophthalmus_maximus
ENSCING00000002018	-	99	65.686	ENSSDUG00000023657	dhx36	54	65.979	Seriola_dumerili
ENSCING00000002018	-	84	65.600	ENSSARG00000006396	-	58	65.600	Sorex_araneus
ENSCING00000002018	-	97	67.327	ENSSPUG00000000785	-	61	67.327	Sphenodon_punctatus
ENSCING00000002018	-	99	63.333	ENSSPAG00000022168	dhx36	59	63.819	Stegastes_partitus
ENSCING00000002018	-	98	66.832	ENSSSCG00000024916	DHX36	57	66.832	Sus_scrofa
ENSCING00000002018	-	98	68.317	ENSTGUG00000011317	DHX36	59	68.317	Taeniopygia_guttata
ENSCING00000002018	-	98	67.337	ENSTRUG00000001230	dhx36	60	67.337	Takifugu_rubripes
ENSCING00000002018	-	99	65.403	ENSTNIG00000007692	dhx36	53	65.403	Tetraodon_nigroviridis
ENSCING00000002018	-	97	68.182	ENSTBEG00000013495	DHX36	52	68.182	Tupaia_belangeri
ENSCING00000002018	-	98	67.822	ENSTTRG00000016883	DHX36	54	67.822	Tursiops_truncatus
ENSCING00000002018	-	98	67.327	ENSUAMG00000017002	DHX36	54	67.327	Ursus_americanus
ENSCING00000002018	-	98	67.327	ENSUMAG00000011908	DHX36	57	67.327	Ursus_maritimus
ENSCING00000002018	-	98	58.416	ENSVPAG00000004046	DHX36	54	58.416	Vicugna_pacos
ENSCING00000002018	-	98	67.822	ENSVVUG00000024516	DHX36	52	67.822	Vulpes_vulpes
ENSCING00000002018	-	98	66.337	ENSXETG00000007768	dhx36	53	66.337	Xenopus_tropicalis
ENSCING00000002018	-	99	52.284	ENSXCOG00000011687	dhx36	57	52.792	Xiphophorus_couchianus
ENSCING00000002018	-	99	62.857	ENSXMAG00000001490	dhx36	58	55.122	Xiphophorus_maculatus