EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002081 (Gene tree)
Gene ID: 100186483
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase DDX47
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1653 bases
Position: chrHT000252.1:2466-4118
Accession: 100186483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000004240	ResIII	PF04851.15	1.9e-05	1	1
ENSCINP00000004240	DEAD	PF00270.29	9.6e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000004240	-	1420	XM_002129432	ENSCINP00000004240	449 (aa)	XP_002129468	F7AA42

Gene Model

Click here to download ENSCING00000002081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002081	-	98	68.680	ENSG00000213782	DDX47	95	69.925	Homo_sapiens
ENSCING00000002081	-	93	74.048	ENSAPOG00000021751	ddx47	89	72.727	Acanthochromis_polyacanthus
ENSCING00000002081	-	98	68.386	ENSAMEG00000010740	DDX47	91	71.807	Ailuropoda_melanoleuca
ENSCING00000002081	-	95	71.329	ENSACIG00000022802	ddx47	89	71.329	Amphilophus_citrinellus
ENSCING00000002081	-	93	73.571	ENSAOCG00000015213	ddx47	88	72.261	Amphiprion_ocellaris
ENSCING00000002081	-	93	73.810	ENSAPEG00000014476	ddx47	95	74.146	Amphiprion_percula
ENSCING00000002081	-	95	72.664	ENSATEG00000010277	ddx47	89	72.664	Anabas_testudineus
ENSCING00000002081	-	90	73.645	ENSAPLG00000015324	DDX47	88	73.645	Anas_platyrhynchos
ENSCING00000002081	-	97	69.725	ENSACAG00000010648	DDX47	94	70.714	Anolis_carolinensis
ENSCING00000002081	-	80	72.404	ENSANAG00000025235	DDX47	99	72.404	Aotus_nancymaae
ENSCING00000002081	-	97	70.252	ENSAMXG00000010727	ddx47	93	70.252	Astyanax_mexicanus
ENSCING00000002081	-	98	68.707	ENSBTAG00000019608	DDX47	89	72.727	Bos_taurus
ENSCING00000002081	-	89	66.583	WBGene00012059	T26G10.1	81	66.583	Caenorhabditis_elegans
ENSCING00000002081	-	95	70.000	ENSCJAG00000021633	DDX47	91	72.996	Callithrix_jacchus
ENSCING00000002081	-	90	73.383	ENSCAFG00000013224	DDX47	83	73.383	Canis_familiaris
ENSCING00000002081	-	90	73.383	ENSCAFG00020006612	DDX47	88	73.383	Canis_lupus_dingo
ENSCING00000002081	-	98	68.934	ENSCHIG00000026011	DDX47	89	72.973	Capra_hircus
ENSCING00000002081	-	97	70.023	ENSTSYG00000002978	DDX47	91	71.875	Carlito_syrichta
ENSCING00000002081	-	53	74.658	ENSCAPG00000002814	DDX47	86	74.658	Cavia_aperea
ENSCING00000002081	-	90	73.086	ENSCPOG00000035172	DDX47	89	73.086	Cavia_porcellus
ENSCING00000002081	-	99	68.293	ENSCCAG00000025717	DDX47	92	71.360	Cebus_capucinus
ENSCING00000002081	-	98	68.680	ENSCATG00000014281	-	91	71.807	Cercocebus_atys
ENSCING00000002081	-	61	64.057	ENSCATG00000038188	-	96	70.370	Cercocebus_atys
ENSCING00000002081	-	99	68.304	ENSCLAG00000015856	DDX47	92	71.394	Chinchilla_lanigera
ENSCING00000002081	-	98	68.680	ENSCSAG00000008569	DDX47	91	71.807	Chlorocebus_sabaeus
ENSCING00000002081	-	69	54.221	ENSCHOG00000010943	DDX47	66	54.221	Choloepus_hoffmanni
ENSCING00000002081	-	95	70.629	ENSCPBG00000020967	-	88	74.372	Chrysemys_picta_bellii
ENSCING00000002081	-	99	88.063	ENSCSAVG00000011566	-	98	88.276	Ciona_savignyi
ENSCING00000002081	-	98	68.680	ENSCANG00000040222	DDX47	91	71.807	Colobus_angolensis_palliatus
ENSCING00000002081	-	89	74.121	ENSCGRG00001014927	Ddx47	89	73.333	Cricetulus_griseus_chok1gshd
ENSCING00000002081	-	89	74.121	ENSCGRG00000010351	Ddx47	91	73.333	Cricetulus_griseus_crigri
ENSCING00000002081	-	92	72.881	ENSCSEG00000007687	ddx47	94	72.881	Cynoglossus_semilaevis
ENSCING00000002081	-	99	63.355	ENSDNOG00000040799	DDX47	92	66.033	Dasypus_novemcinctus
ENSCING00000002081	-	94	69.647	FBgn0032919	CG9253	83	69.647	Drosophila_melanogaster
ENSCING00000002081	-	74	66.216	ENSETEG00000011487	DDX47	82	66.216	Echinops_telfairi
ENSCING00000002081	-	90	73.383	ENSEASG00005014653	DDX47	88	73.383	Equus_asinus_asinus
ENSCING00000002081	-	90	73.383	ENSECAG00000023622	DDX47	88	73.383	Equus_caballus
ENSCING00000002081	-	72	75.000	ENSEEUG00000008639	DDX47	71	75.000	Erinaceus_europaeus
ENSCING00000002081	-	95	70.413	ENSELUG00000009495	ddx47	83	70.413	Esox_lucius
ENSCING00000002081	-	91	71.981	ENSFCAG00000013990	DDX47	91	71.981	Felis_catus
ENSCING00000002081	-	91	74.572	ENSFALG00000011391	DDX47	90	73.735	Ficedula_albicollis
ENSCING00000002081	-	99	68.080	ENSFDAG00000014635	-	92	71.463	Fukomys_damarensis
ENSCING00000002081	-	61	55.000	ENSFDAG00000004127	-	69	54.286	Fukomys_damarensis
ENSCING00000002081	-	92	73.236	ENSFHEG00000011435	ddx47	86	73.236	Fundulus_heteroclitus
ENSCING00000002081	-	85	74.674	ENSGMOG00000010290	ddx47	100	74.674	Gadus_morhua
ENSCING00000002081	-	90	73.892	ENSGALG00000011794	DDX47	91	73.415	Gallus_gallus
ENSCING00000002081	-	95	72.093	ENSGAFG00000017403	ddx47	90	72.093	Gambusia_affinis
ENSCING00000002081	-	89	74.000	ENSGACG00000007092	ddx47	89	72.616	Gasterosteus_aculeatus
ENSCING00000002081	-	96	69.697	ENSGAGG00000023801	DDX47	80	73.367	Gopherus_agassizii
ENSCING00000002081	-	98	68.680	ENSGGOG00000005882	DDX47	91	71.807	Gorilla_gorilla
ENSCING00000002081	-	92	73.381	ENSHBUG00000022213	ddx47	91	71.264	Haplochromis_burtoni
ENSCING00000002081	-	96	69.746	ENSHGLG00000007623	DDX47	89	73.383	Heterocephalus_glaber_female
ENSCING00000002081	-	96	69.746	ENSHGLG00100009764	DDX47	89	73.383	Heterocephalus_glaber_male
ENSCING00000002081	-	92	73.544	ENSHCOG00000005496	ddx47	85	73.544	Hippocampus_comes
ENSCING00000002081	-	95	72.326	ENSIPUG00000023788	ddx47	92	72.326	Ictalurus_punctatus
ENSCING00000002081	-	89	73.434	ENSSTOG00000027266	DDX47	91	73.434	Ictidomys_tridecemlineatus
ENSCING00000002081	-	89	73.750	ENSJJAG00000000118	Ddx47	90	72.616	Jaculus_jaculus
ENSCING00000002081	-	92	74.334	ENSKMAG00000013071	ddx47	87	72.897	Kryptolebias_marmoratus
ENSCING00000002081	-	93	73.206	ENSLBEG00000028348	ddx47	86	73.206	Labrus_bergylta
ENSCING00000002081	-	95	71.495	ENSLACG00000013814	DDX47	90	73.350	Latimeria_chalumnae
ENSCING00000002081	-	96	70.276	ENSLAFG00000015474	DDX47	89	73.632	Loxodonta_africana
ENSCING00000002081	-	98	68.750	ENSMFAG00000042577	DDX47	91	71.875	Macaca_fascicularis
ENSCING00000002081	-	98	68.750	ENSMMUG00000017993	DDX47	91	71.875	Macaca_mulatta
ENSCING00000002081	-	82	67.655	ENSMNEG00000044164	DDX47	84	67.655	Macaca_nemestrina
ENSCING00000002081	-	61	64.057	ENSMLEG00000037204	-	94	64.057	Mandrillus_leucophaeus
ENSCING00000002081	-	98	68.680	ENSMLEG00000040358	-	91	71.807	Mandrillus_leucophaeus
ENSCING00000002081	-	94	72.131	ENSMAMG00000008915	ddx47	89	72.131	Mastacembelus_armatus
ENSCING00000002081	-	92	61.758	ENSMZEG00005004902	DDX47	90	60.137	Maylandia_zebra
ENSCING00000002081	-	67	73.750	ENSMZEG00005022989	-	59	73.750	Maylandia_zebra
ENSCING00000002081	-	89	74.065	ENSMGAG00000011857	DDX47	93	74.065	Meleagris_gallopavo
ENSCING00000002081	-	91	72.973	ENSMAUG00000012214	Ddx47	89	72.973	Mesocricetus_auratus
ENSCING00000002081	-	81	68.293	ENSMICG00000010086	DDX47	89	73.913	Microcebus_murinus
ENSCING00000002081	-	93	71.703	ENSMOCG00000003693	Ddx47	92	71.703	Microtus_ochrogaster
ENSCING00000002081	-	94	68.246	ENSMMOG00000008610	ddx47	91	68.246	Mola_mola
ENSCING00000002081	-	99	67.562	ENSMODG00000018223	DDX47	91	70.433	Monodelphis_domestica
ENSCING00000002081	-	92	72.837	ENSMALG00000002420	ddx47	86	72.837	Monopterus_albus
ENSCING00000002081	-	91	72.727	MGP_CAROLIEiJ_G0028986	Ddx47	96	69.845	Mus_caroli
ENSCING00000002081	-	91	72.973	ENSMUSG00000030204	Ddx47	96	70.103	Mus_musculus
ENSCING00000002081	-	91	72.973	MGP_PahariEiJ_G0022748	Ddx47	96	69.923	Mus_pahari
ENSCING00000002081	-	91	72.973	MGP_SPRETEiJ_G0030034	Ddx47	96	70.103	Mus_spretus
ENSCING00000002081	-	96	69.977	ENSMPUG00000011726	DDX47	88	73.632	Mustela_putorius_furo
ENSCING00000002081	-	96	70.208	ENSMLUG00000003163	DDX47	88	73.881	Myotis_lucifugus
ENSCING00000002081	-	91	73.219	ENSNGAG00000020166	Ddx47	89	73.219	Nannospalax_galili
ENSCING00000002081	-	92	73.141	ENSNBRG00000001394	ddx47	88	73.141	Neolamprologus_brichardi
ENSCING00000002081	-	98	68.904	ENSNLEG00000003605	DDX47	91	72.048	Nomascus_leucogenys
ENSCING00000002081	-	87	61.026	ENSMEUG00000005930	DDX47	95	61.968	Notamacropus_eugenii
ENSCING00000002081	-	74	75.000	ENSOPRG00000014446	DDX47	67	75.000	Ochotona_princeps
ENSCING00000002081	-	95	70.465	ENSODEG00000012890	DDX47	88	73.086	Octodon_degus
ENSCING00000002081	-	92	73.381	ENSONIG00000008325	ddx47	92	73.381	Oreochromis_niloticus
ENSCING00000002081	-	59	69.145	ENSOANG00000003026	-	94	69.145	Ornithorhynchus_anatinus
ENSCING00000002081	-	96	69.676	ENSOCUG00000014390	DDX47	91	71.875	Oryctolagus_cuniculus
ENSCING00000002081	-	91	73.902	ENSORLG00000015021	ddx47	84	73.902	Oryzias_latipes
ENSCING00000002081	-	91	73.659	ENSORLG00020005546	ddx47	89	75.192	Oryzias_latipes_hni
ENSCING00000002081	-	91	73.902	ENSORLG00015017712	ddx47	84	73.902	Oryzias_latipes_hsok
ENSCING00000002081	-	90	74.568	ENSOMEG00000008065	ddx47	86	73.317	Oryzias_melastigma
ENSCING00000002081	-	90	70.123	ENSOGAG00000003748	DDX47	90	70.123	Otolemur_garnettii
ENSCING00000002081	-	98	68.934	ENSOARG00000020845	DDX47	87	72.973	Ovis_aries
ENSCING00000002081	-	96	69.816	ENSPPAG00000039793	DDX47	88	73.134	Pan_paniscus
ENSCING00000002081	-	90	73.383	ENSPPRG00000017561	DDX47	88	73.383	Panthera_pardus
ENSCING00000002081	-	90	73.383	ENSPTIG00000019604	DDX47	88	73.383	Panthera_tigris_altaica
ENSCING00000002081	-	96	69.816	ENSPTRG00000033743	DDX47	88	73.134	Pan_troglodytes
ENSCING00000002081	-	98	68.680	ENSPANG00000016430	DDX47	91	71.807	Papio_anubis
ENSCING00000002081	-	90	73.645	ENSPKIG00000006718	ddx47	85	75.515	Paramormyrops_kingsleyae
ENSCING00000002081	-	95	70.698	ENSPSIG00000006056	DDX47	87	74.559	Pelodiscus_sinensis
ENSCING00000002081	-	89	74.623	ENSPMGG00000009920	ddx47	85	73.219	Periophthalmus_magnuspinnatus
ENSCING00000002081	-	90	73.333	ENSPEMG00000009746	Ddx47	89	73.333	Peromyscus_maniculatus_bairdii
ENSCING00000002081	-	94	71.059	ENSPMAG00000000186	-	96	73.086	Petromyzon_marinus
ENSCING00000002081	-	92	71.256	ENSPCIG00000029927	DDX47	90	71.256	Phascolarctos_cinereus
ENSCING00000002081	-	95	72.727	ENSPFOG00000003330	ddx47	86	72.727	Poecilia_formosa
ENSCING00000002081	-	90	67.805	ENSPLAG00000014318	ddx47	87	67.805	Poecilia_latipinna
ENSCING00000002081	-	95	72.494	ENSPMEG00000018616	ddx47	86	72.727	Poecilia_mexicana
ENSCING00000002081	-	93	74.286	ENSPREG00000015560	ddx47	90	71.262	Poecilia_reticulata
ENSCING00000002081	-	98	68.680	ENSPPYG00000004309	DDX47	91	71.807	Pongo_abelii
ENSCING00000002081	-	90	73.383	ENSPCOG00000028218	DDX47	88	73.383	Propithecus_coquereli
ENSCING00000002081	-	96	67.593	ENSPVAG00000002640	DDX47	88	71.144	Pteropus_vampyrus
ENSCING00000002081	-	92	73.381	ENSPNYG00000020669	ddx47	90	71.264	Pundamilia_nyererei
ENSCING00000002081	-	96	72.158	ENSPNAG00000011435	ddx47	92	72.158	Pygocentrus_nattereri
ENSCING00000002081	-	91	72.973	ENSRNOG00000007838	Ddx47	89	72.973	Rattus_norvegicus
ENSCING00000002081	-	98	68.680	ENSRBIG00000026934	DDX47	91	71.807	Rhinopithecus_bieti
ENSCING00000002081	-	98	68.680	ENSRROG00000025014	DDX47	91	71.807	Rhinopithecus_roxellana
ENSCING00000002081	-	92	52.530	YHR065C	-	82	52.530	Saccharomyces_cerevisiae
ENSCING00000002081	-	90	73.134	ENSSBOG00000035866	DDX47	88	73.134	Saimiri_boliviensis_boliviensis
ENSCING00000002081	-	92	70.773	ENSSHAG00000010825	DDX47	80	70.773	Sarcophilus_harrisii
ENSCING00000002081	-	91	71.463	ENSSFOG00015013392	ddx47	87	71.463	Scleropages_formosus
ENSCING00000002081	-	92	73.608	ENSSMAG00000004179	ddx47	88	72.158	Scophthalmus_maximus
ENSCING00000002081	-	90	74.876	ENSSDUG00000018110	ddx47	77	74.876	Seriola_dumerili
ENSCING00000002081	-	95	72.494	ENSSLDG00000018142	ddx47	86	72.494	Seriola_lalandi_dorsalis
ENSCING00000002081	-	61	74.909	ENSSARG00000007535	DDX47	92	74.909	Sorex_araneus
ENSCING00000002081	-	96	70.833	ENSSPUG00000004958	DDX47	90	72.927	Sphenodon_punctatus
ENSCING00000002081	-	90	75.248	ENSSPAG00000016431	ddx47	86	72.494	Stegastes_partitus
ENSCING00000002081	-	99	67.857	ENSSSCG00000033149	DDX47	90	73.434	Sus_scrofa
ENSCING00000002081	-	91	74.817	ENSTGUG00000009385	DDX47	95	72.600	Taeniopygia_guttata
ENSCING00000002081	-	95	71.462	ENSTRUG00000021826	ddx47	92	71.462	Takifugu_rubripes
ENSCING00000002081	-	78	72.126	ENSTBEG00000013697	DDX47	76	72.126	Tupaia_belangeri
ENSCING00000002081	-	95	70.163	ENSTTRG00000015036	DDX47	87	73.869	Tursiops_truncatus
ENSCING00000002081	-	97	69.178	ENSUAMG00000016382	DDX47	89	72.727	Ursus_americanus
ENSCING00000002081	-	91	72.048	ENSUMAG00000002358	DDX47	91	72.048	Ursus_maritimus
ENSCING00000002081	-	78	56.571	ENSVPAG00000012483	-	99	56.571	Vicugna_pacos
ENSCING00000002081	-	90	73.383	ENSVVUG00000004697	DDX47	83	73.383	Vulpes_vulpes
ENSCING00000002081	-	92	72.155	ENSXETG00000022984	ddx47	92	72.222	Xenopus_tropicalis
ENSCING00000002081	-	93	73.798	ENSXCOG00000015880	ddx47	88	73.798	Xiphophorus_couchianus
ENSCING00000002081	-	95	73.023	ENSXMAG00000008268	ddx47	80	73.023	Xiphophorus_maculatus