EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002109 (Gene tree)
Gene ID: 100185308
Gene Symbol: -
Alias: -
Full Name: U7 snRNA-associated Sm-like protein LSm11
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2649 bases
Position: chrHT000354.1:589-3237
Accession: 100185308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000004280	LSM	PF01423.22	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000004280	-	666	XM_002129095	ENSCINP00000004280	173 (aa)	XP_002129131	F6ZR96

Gene Model

Click here to download ENSCING00000002109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002109	-	99	52.174	ENSCSAVG00000011571	-	68	52.174	Ciona_savignyi
ENSCING00000002109	-	84	30.588	ENSCSEG00000019951	lsm11	55	30.588	Cynoglossus_semilaevis
ENSCING00000002109	-	86	31.073	ENSMMOG00000009365	lsm11	55	31.250	Mola_mola
ENSCING00000002109	-	84	34.320	ENSPMGG00000020709	lsm11	54	34.320	Periophthalmus_magnuspinnatus
ENSCING00000002109	-	84	30.588	ENSXMAG00000008238	lsm11	56	30.588	Xiphophorus_maculatus