EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002128 (Gene tree)
Gene ID: 778820
Gene Symbol: zf(c2h2)-35
Alias: -
Full Name: zinc finger protein
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2874 bases
Position: chrHT001096.1:32552-35425
Accession: 778820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000004330	zf-C2H2	PF00096.26	1.3e-24	1	5
ENSCINP00000004330	zf-C2H2	PF00096.26	1.3e-24	2	5
ENSCINP00000004330	zf-C2H2	PF00096.26	1.3e-24	3	5
ENSCINP00000004330	zf-C2H2	PF00096.26	1.3e-24	4	5
ENSCINP00000004330	zf-C2H2	PF00096.26	1.3e-24	5	5
ENSCINP00000004330	zf-met	PF12874.7	1.1e-08	1	2
ENSCINP00000004330	zf-met	PF12874.7	1.1e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000004330	-	1422	XM_009863127	ENSCINP00000004330	239 (aa)	XP_009861429	F6WRR0

Gene Model

Click here to download ENSCING00000002128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002128's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002128	zf(c2h2)-35	62	40.800	ENSAPOG00000019138	-	56	40.800	Acanthochromis_polyacanthus
ENSCING00000002128	zf(c2h2)-35	72	36.508	ENSACIG00000017892	-	75	36.508	Amphilophus_citrinellus
ENSCING00000002128	zf(c2h2)-35	62	39.683	ENSACIG00000007464	-	50	39.683	Amphilophus_citrinellus
ENSCING00000002128	zf(c2h2)-35	67	38.710	ENSACIG00000004641	-	53	38.710	Amphilophus_citrinellus
ENSCING00000002128	zf(c2h2)-35	62	42.553	ENSAOCG00000001325	-	66	42.553	Amphiprion_ocellaris
ENSCING00000002128	zf(c2h2)-35	65	37.162	ENSAOCG00000016897	-	66	37.162	Amphiprion_ocellaris
ENSCING00000002128	zf(c2h2)-35	51	38.384	ENSAOCG00000006744	-	71	38.384	Amphiprion_ocellaris
ENSCING00000002128	zf(c2h2)-35	63	40.268	ENSAPEG00000010013	-	55	40.268	Amphiprion_percula
ENSCING00000002128	zf(c2h2)-35	65	37.838	ENSAPEG00000001556	-	66	37.838	Amphiprion_percula
ENSCING00000002128	zf(c2h2)-35	73	40.187	ENSATEG00000018931	-	90	40.187	Anabas_testudineus
ENSCING00000002128	zf(c2h2)-35	66	35.385	ENSACLG00000011658	-	92	35.385	Astatotilapia_calliptera
ENSCING00000002128	zf(c2h2)-35	64	41.772	ENSAMXG00000029518	-	51	41.772	Astyanax_mexicanus
ENSCING00000002128	zf(c2h2)-35	63	35.294	ENSCSEG00000010264	-	63	35.294	Cynoglossus_semilaevis
ENSCING00000002128	zf(c2h2)-35	66	53.659	ENSCSEG00000015593	-	77	53.659	Cynoglossus_semilaevis
ENSCING00000002128	zf(c2h2)-35	62	39.474	ENSCSEG00000010453	-	53	39.474	Cynoglossus_semilaevis
ENSCING00000002128	zf(c2h2)-35	62	40.602	ENSCVAG00000006653	-	54	40.602	Cyprinodon_variegatus
ENSCING00000002128	zf(c2h2)-35	64	40.000	ENSCVAG00000003250	-	65	40.000	Cyprinodon_variegatus
ENSCING00000002128	zf(c2h2)-35	62	40.964	ENSCVAG00000020141	-	59	36.264	Cyprinodon_variegatus
ENSCING00000002128	zf(c2h2)-35	64	37.097	ENSCVAG00000015616	-	74	37.097	Cyprinodon_variegatus
ENSCING00000002128	zf(c2h2)-35	63	34.194	ENSEBUG00000011449	-	76	34.194	Eptatretus_burgeri
ENSCING00000002128	zf(c2h2)-35	64	37.162	ENSEBUG00000007931	-	60	37.162	Eptatretus_burgeri
ENSCING00000002128	zf(c2h2)-35	66	35.669	ENSELUG00000001909	-	78	33.607	Esox_lucius
ENSCING00000002128	zf(c2h2)-35	63	40.000	ENSELUG00000012088	-	54	40.000	Esox_lucius
ENSCING00000002128	zf(c2h2)-35	65	43.478	ENSELUG00000024007	-	60	42.105	Esox_lucius
ENSCING00000002128	zf(c2h2)-35	65	42.268	ENSGAFG00000008204	-	64	42.268	Gambusia_affinis
ENSCING00000002128	zf(c2h2)-35	62	40.566	ENSGAFG00000001879	-	58	40.566	Gambusia_affinis
ENSCING00000002128	zf(c2h2)-35	70	38.411	ENSHBUG00000006656	-	55	38.411	Haplochromis_burtoni
ENSCING00000002128	zf(c2h2)-35	67	40.217	ENSHCOG00000015497	-	74	40.217	Hippocampus_comes
ENSCING00000002128	zf(c2h2)-35	62	45.833	ENSHCOG00000020670	-	73	45.833	Hippocampus_comes
ENSCING00000002128	zf(c2h2)-35	76	38.000	ENSHCOG00000013489	-	89	38.000	Hippocampus_comes
ENSCING00000002128	zf(c2h2)-35	67	39.865	ENSHCOG00000001873	-	55	39.865	Hippocampus_comes
ENSCING00000002128	zf(c2h2)-35	67	39.865	ENSHCOG00000008550	-	55	39.865	Hippocampus_comes
ENSCING00000002128	zf(c2h2)-35	64	34.746	ENSKMAG00000007699	-	70	34.746	Kryptolebias_marmoratus
ENSCING00000002128	zf(c2h2)-35	62	34.286	ENSKMAG00000014184	-	53	33.684	Kryptolebias_marmoratus
ENSCING00000002128	zf(c2h2)-35	62	36.735	ENSLBEG00000007106	-	71	36.735	Labrus_bergylta
ENSCING00000002128	zf(c2h2)-35	62	44.262	ENSLBEG00000006161	-	77	41.176	Labrus_bergylta
ENSCING00000002128	zf(c2h2)-35	93	40.909	ENSLBEG00000001132	-	78	40.909	Labrus_bergylta
ENSCING00000002128	zf(c2h2)-35	64	40.741	ENSLBEG00000017424	-	97	36.145	Labrus_bergylta
ENSCING00000002128	zf(c2h2)-35	70	39.344	ENSLBEG00000011210	-	53	39.344	Labrus_bergylta
ENSCING00000002128	zf(c2h2)-35	70	41.606	ENSLOCG00000004208	-	99	41.606	Lepisosteus_oculatus
ENSCING00000002128	zf(c2h2)-35	85	40.816	ENSMAMG00000017939	-	84	40.816	Mastacembelus_armatus
ENSCING00000002128	zf(c2h2)-35	66	35.172	ENSMZEG00005013907	-	76	35.172	Maylandia_zebra
ENSCING00000002128	zf(c2h2)-35	57	42.857	ENSMMOG00000013330	-	90	43.590	Mola_mola
ENSCING00000002128	zf(c2h2)-35	94	34.314	ENSMALG00000011241	-	56	34.314	Monopterus_albus
ENSCING00000002128	zf(c2h2)-35	63	39.252	ENSMALG00000004279	-	80	39.252	Monopterus_albus
ENSCING00000002128	zf(c2h2)-35	64	38.235	ENSONIG00000007967	-	54	38.235	Oreochromis_niloticus
ENSCING00000002128	zf(c2h2)-35	77	40.984	ENSONIG00000005050	-	64	40.984	Oreochromis_niloticus
ENSCING00000002128	zf(c2h2)-35	81	36.842	ENSORLG00000002268	-	90	36.842	Oryzias_latipes
ENSCING00000002128	zf(c2h2)-35	65	46.154	ENSORLG00000021885	-	60	42.188	Oryzias_latipes
ENSCING00000002128	zf(c2h2)-35	62	36.913	ENSORLG00020018921	-	73	36.913	Oryzias_latipes_hni
ENSCING00000002128	zf(c2h2)-35	65	40.385	ENSORLG00015018099	-	68	40.385	Oryzias_latipes_hsok
ENSCING00000002128	zf(c2h2)-35	65	37.931	ENSOMEG00000005578	-	66	37.931	Oryzias_melastigma
ENSCING00000002128	zf(c2h2)-35	64	34.395	ENSPMGG00000006928	-	52	34.395	Periophthalmus_magnuspinnatus
ENSCING00000002128	zf(c2h2)-35	75	41.935	ENSPMGG00000009571	-	74	41.935	Periophthalmus_magnuspinnatus
ENSCING00000002128	zf(c2h2)-35	63	41.722	ENSPMGG00000002661	-	64	41.722	Periophthalmus_magnuspinnatus
ENSCING00000002128	zf(c2h2)-35	72	35.838	ENSPMGG00000007051	-	55	37.634	Periophthalmus_magnuspinnatus
ENSCING00000002128	zf(c2h2)-35	63	36.508	ENSPMGG00000019750	-	78	31.852	Periophthalmus_magnuspinnatus
ENSCING00000002128	zf(c2h2)-35	62	44.262	ENSPMGG00000002455	-	87	38.017	Periophthalmus_magnuspinnatus
ENSCING00000002128	zf(c2h2)-35	62	39.189	ENSPMGG00000002659	-	69	39.189	Periophthalmus_magnuspinnatus
ENSCING00000002128	zf(c2h2)-35	62	38.462	ENSPMAG00000000839	-	94	38.462	Petromyzon_marinus
ENSCING00000002128	zf(c2h2)-35	64	35.374	ENSPMAG00000004189	-	98	35.374	Petromyzon_marinus
ENSCING00000002128	zf(c2h2)-35	59	36.478	ENSPMAG00000002022	-	100	36.478	Petromyzon_marinus
ENSCING00000002128	zf(c2h2)-35	68	43.077	ENSPFOG00000009491	-	53	38.037	Poecilia_formosa
ENSCING00000002128	zf(c2h2)-35	76	40.000	ENSPFOG00000018860	-	100	40.000	Poecilia_formosa
ENSCING00000002128	zf(c2h2)-35	64	40.000	ENSPLAG00000014832	-	77	40.000	Poecilia_latipinna
ENSCING00000002128	zf(c2h2)-35	64	40.000	ENSPLAG00000008941	-	80	40.000	Poecilia_latipinna
ENSCING00000002128	zf(c2h2)-35	62	40.541	ENSPLAG00000010067	-	63	40.541	Poecilia_latipinna
ENSCING00000002128	zf(c2h2)-35	68	43.077	ENSPMEG00000024117	-	53	38.037	Poecilia_mexicana
ENSCING00000002128	zf(c2h2)-35	66	48.980	ENSPMEG00000002953	-	59	48.980	Poecilia_mexicana
ENSCING00000002128	zf(c2h2)-35	64	40.000	ENSPMEG00000005210	-	77	40.000	Poecilia_mexicana
ENSCING00000002128	zf(c2h2)-35	62	40.000	ENSPREG00000002603	-	52	40.000	Poecilia_reticulata
ENSCING00000002128	zf(c2h2)-35	61	37.895	ENSPREG00000009488	-	88	37.895	Poecilia_reticulata
ENSCING00000002128	zf(c2h2)-35	62	39.252	ENSPNYG00000017888	-	50	38.053	Pundamilia_nyererei
ENSCING00000002128	zf(c2h2)-35	62	35.294	ENSPNAG00000005946	-	84	35.294	Pygocentrus_nattereri
ENSCING00000002128	zf(c2h2)-35	76	37.838	ENSSMAG00000013291	-	90	39.785	Scophthalmus_maximus
ENSCING00000002128	zf(c2h2)-35	64	34.259	ENSSLDG00000014436	-	56	33.775	Seriola_lalandi_dorsalis
ENSCING00000002128	zf(c2h2)-35	65	40.260	ENSSPAG00000011544	-	50	40.260	Stegastes_partitus
ENSCING00000002128	zf(c2h2)-35	60	33.333	ENSSPAG00000005770	-	60	33.333	Stegastes_partitus
ENSCING00000002128	zf(c2h2)-35	62	40.000	ENSSPAG00000011533	-	85	40.000	Stegastes_partitus
ENSCING00000002128	zf(c2h2)-35	74	41.304	ENSXETG00000012506	znf91	99	41.304	Xenopus_tropicalis
ENSCING00000002128	zf(c2h2)-35	62	35.338	ENSXCOG00000020768	-	63	35.338	Xiphophorus_couchianus
ENSCING00000002128	zf(c2h2)-35	62	42.647	ENSXCOG00000000254	-	62	42.647	Xiphophorus_couchianus
ENSCING00000002128	zf(c2h2)-35	62	38.739	ENSXCOG00000003441	-	61	38.514	Xiphophorus_couchianus
ENSCING00000002128	zf(c2h2)-35	62	40.000	ENSXMAG00000012936	-	77	40.000	Xiphophorus_maculatus