EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002195 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2643 bases
Position: chr8:2352981-2355623
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000004474	DNA_pol_A_exo1	PF01612.20	1.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000004474	-	2448	-	ENSCINP00000004474	816 (aa)	-	F6S593

Gene Model

Click here to download ENSCING00000002195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002195's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002195	-	84	30.853	ENSAPOG00000015520	exd3	85	30.853	Acanthochromis_polyacanthus
ENSCING00000002195	-	99	30.393	ENSACIG00000005561	exd3	88	30.393	Amphilophus_citrinellus
ENSCING00000002195	-	99	30.600	ENSATEG00000019941	exd3	93	30.796	Anabas_testudineus
ENSCING00000002195	-	80	33.036	ENSAPLG00000015358	EXD3	93	33.036	Anas_platyrhynchos
ENSCING00000002195	-	99	30.173	ENSACLG00000021922	exd3	92	30.211	Astatotilapia_calliptera
ENSCING00000002195	-	98	30.566	ENSAMXG00000019494	exd3	93	30.566	Astyanax_mexicanus
ENSCING00000002195	-	95	30.155	ENSCAFG00000019444	EXD3	90	30.155	Canis_familiaris
ENSCING00000002195	-	95	30.535	ENSCAFG00020003171	EXD3	86	30.535	Canis_lupus_dingo
ENSCING00000002195	-	80	32.153	ENSCPBG00000011686	EXD3	86	31.198	Chrysemys_picta_bellii
ENSCING00000002195	-	60	70.339	ENSCSAVG00000005704	-	99	70.339	Ciona_savignyi
ENSCING00000002195	-	84	32.594	ENSCSEG00000000750	exd3	90	32.301	Cynoglossus_semilaevis
ENSCING00000002195	-	93	30.964	ENSEASG00005016023	EXD3	87	30.964	Equus_asinus_asinus
ENSCING00000002195	-	93	31.626	ENSECAG00000017546	EXD3	84	30.838	Equus_caballus
ENSCING00000002195	-	98	30.894	ENSELUG00000007181	exd3	93	30.886	Esox_lucius
ENSCING00000002195	-	97	30.825	ENSFALG00000005132	EXD3	96	30.825	Ficedula_albicollis
ENSCING00000002195	-	97	31.250	ENSGALG00000052646	EXD3	92	31.250	Gallus_gallus
ENSCING00000002195	-	82	31.457	ENSGACG00000017442	exd3	95	31.457	Gasterosteus_aculeatus
ENSCING00000002195	-	81	30.523	ENSGAGG00000011888	EXD3	88	30.523	Gopherus_agassizii
ENSCING00000002195	-	80	40.784	ENSGGOG00000024724	EXD3	85	40.784	Gorilla_gorilla
ENSCING00000002195	-	99	30.289	ENSHBUG00000001405	exd3	92	30.328	Haplochromis_burtoni
ENSCING00000002195	-	99	30.624	ENSIPUG00000020343	exd3	92	30.896	Ictalurus_punctatus
ENSCING00000002195	-	99	30.415	ENSKMAG00000011881	exd3	92	30.600	Kryptolebias_marmoratus
ENSCING00000002195	-	84	30.533	ENSLBEG00000004079	exd3	82	30.533	Labrus_bergylta
ENSCING00000002195	-	76	32.353	ENSLAFG00000001122	EXD3	85	32.353	Loxodonta_africana
ENSCING00000002195	-	98	30.622	ENSMNEG00000033487	EXD3	87	31.731	Macaca_nemestrina
ENSCING00000002195	-	84	31.698	ENSMAMG00000008407	exd3	89	31.830	Mastacembelus_armatus
ENSCING00000002195	-	99	30.173	ENSMZEG00005017270	exd3	92	30.211	Maylandia_zebra
ENSCING00000002195	-	80	31.818	ENSMGAG00000001267	EXD3	93	31.818	Meleagris_gallopavo
ENSCING00000002195	-	62	34.717	ENSMODG00000028091	-	94	34.906	Monodelphis_domestica
ENSCING00000002195	-	99	30.671	ENSMALG00000018523	exd3	90	31.141	Monopterus_albus
ENSCING00000002195	-	94	30.177	ENSMPUG00000015130	EXD3	85	30.177	Mustela_putorius_furo
ENSCING00000002195	-	99	30.072	ENSNBRG00000019734	exd3	92	30.072	Neolamprologus_brichardi
ENSCING00000002195	-	83	31.215	ENSNLEG00000009095	-	92	31.215	Nomascus_leucogenys
ENSCING00000002195	-	84	31.543	ENSONIG00000003880	exd3	95	31.768	Oreochromis_niloticus
ENSCING00000002195	-	99	30.314	ENSORLG00000010377	exd3	91	30.617	Oryzias_latipes
ENSCING00000002195	-	99	30.430	ENSORLG00020012287	exd3	91	30.617	Oryzias_latipes_hni
ENSCING00000002195	-	99	30.314	ENSORLG00015001156	exd3	92	30.617	Oryzias_latipes_hsok
ENSCING00000002195	-	99	30.035	ENSOMEG00000023060	exd3	92	30.035	Oryzias_melastigma
ENSCING00000002195	-	81	32.994	ENSPSIG00000007745	EXD3	79	32.994	Pelodiscus_sinensis
ENSCING00000002195	-	98	32.096	ENSPMGG00000023999	exd3	92	32.096	Periophthalmus_magnuspinnatus
ENSCING00000002195	-	68	31.185	ENSPMAG00000006135	-	99	31.185	Petromyzon_marinus
ENSCING00000002195	-	99	31.228	ENSPCIG00000006180	-	92	31.228	Phascolarctos_cinereus
ENSCING00000002195	-	84	31.016	ENSPFOG00000019685	exd3	90	30.965	Poecilia_formosa
ENSCING00000002195	-	84	31.016	ENSPLAG00000022290	exd3	90	30.965	Poecilia_latipinna
ENSCING00000002195	-	99	30.351	ENSPMEG00000008007	exd3	92	30.306	Poecilia_mexicana
ENSCING00000002195	-	99	30.524	ENSPREG00000008142	exd3	92	30.619	Poecilia_reticulata
ENSCING00000002195	-	99	30.173	ENSPNYG00000012849	exd3	92	30.211	Pundamilia_nyererei
ENSCING00000002195	-	98	30.552	ENSPNAG00000016753	exd3	92	31.043	Pygocentrus_nattereri
ENSCING00000002195	-	82	31.171	ENSSHAG00000001276	-	93	31.505	Sarcophilus_harrisii
ENSCING00000002195	-	84	30.501	ENSSFOG00015023063	exd3	82	30.501	Scleropages_formosus
ENSCING00000002195	-	84	31.873	ENSSDUG00000006265	exd3	90	31.995	Seriola_dumerili
ENSCING00000002195	-	95	30.879	ENSSLDG00000004671	exd3	96	30.981	Seriola_lalandi_dorsalis
ENSCING00000002195	-	81	31.105	ENSTGUG00000002494	EXD3	95	31.105	Taeniopygia_guttata
ENSCING00000002195	-	84	31.258	ENSTRUG00000010236	exd3	80	31.258	Takifugu_rubripes
ENSCING00000002195	-	82	31.921	ENSTNIG00000013212	exd3	89	31.921	Tetraodon_nigroviridis
ENSCING00000002195	-	97	30.372	ENSUAMG00000021470	EXD3	97	30.372	Ursus_americanus
ENSCING00000002195	-	95	30.667	ENSVVUG00000029403	EXD3	87	30.461	Vulpes_vulpes
ENSCING00000002195	-	85	31.012	ENSXMAG00000001467	exd3	91	31.012	Xiphophorus_maculatus