EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002232 (Gene tree)
Gene ID: 100179894
Gene Symbol: -
Alias: -
Full Name: Werner syndrome ATP-dependent helicase homolog
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 17397 bases
Position: chr14:2258285-2275681
Accession: 100179894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000004562	HRDC	PF00570.23	7.7e-14	1	1
ENSCINP00000004562	ResIII	PF04851.15	1.6e-05	1	1
ENSCINP00000004562	DEAD	PF00270.29	2.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000004562	-	3761	XM_002131717	ENSCINP00000004562	1194 (aa)	XP_002131753	F6Z6H7

Gene Model

Click here to download ENSCING00000002232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002232	-	79	37.871	ENSG00000165392	WRN	64	37.846	Homo_sapiens
ENSCING00000002232	-	71	41.544	ENSAMEG00000000475	-	69	41.544	Ailuropoda_melanoleuca
ENSCING00000002232	-	89	35.049	ENSAPLG00000001616	WRN	76	35.398	Anas_platyrhynchos
ENSCING00000002232	-	69	38.007	ENSACAG00000003109	WRN	67	36.892	Anolis_carolinensis
ENSCING00000002232	-	67	41.889	ENSANAG00000032806	WRN	67	39.001	Aotus_nancymaae
ENSCING00000002232	-	67	42.509	ENSAMXG00000010066	wrn	69	38.255	Astyanax_mexicanus
ENSCING00000002232	-	69	40.962	ENSBTAG00000021592	WRN	64	38.901	Bos_taurus
ENSCING00000002232	-	74	33.917	WBGene00006944	wrn-1	82	33.550	Caenorhabditis_elegans
ENSCING00000002232	-	79	38.946	ENSCJAG00000012511	WRN	69	36.648	Callithrix_jacchus
ENSCING00000002232	-	78	38.786	ENSCAFG00000006410	WRN	63	40.319	Canis_familiaris
ENSCING00000002232	-	69	41.287	ENSCAFG00020001236	WRN	60	40.770	Canis_lupus_dingo
ENSCING00000002232	-	69	40.351	ENSCHIG00000014991	WRN	64	38.655	Capra_hircus
ENSCING00000002232	-	68	41.050	ENSTSYG00000012689	WRN	59	41.392	Carlito_syrichta
ENSCING00000002232	-	57	45.865	ENSCAPG00000016803	WRN	63	45.865	Cavia_aperea
ENSCING00000002232	-	96	35.053	ENSCPOG00000002943	WRN	71	36.633	Cavia_porcellus
ENSCING00000002232	-	70	41.163	ENSCCAG00000023793	WRN	65	38.650	Cebus_capucinus
ENSCING00000002232	-	69	41.383	ENSCATG00000040557	WRN	65	38.737	Cercocebus_atys
ENSCING00000002232	-	70	40.793	ENSCLAG00000000817	WRN	56	40.793	Chinchilla_lanigera
ENSCING00000002232	-	69	41.383	ENSCSAG00000015810	WRN	67	38.081	Chlorocebus_sabaeus
ENSCING00000002232	-	70	42.026	ENSCPBG00000013421	WRN	58	42.026	Chrysemys_picta_bellii
ENSCING00000002232	-	83	37.780	ENSCANG00000037137	WRN	67	37.476	Colobus_angolensis_palliatus
ENSCING00000002232	-	86	37.037	ENSCGRG00001016491	Wrn	74	36.944	Cricetulus_griseus_chok1gshd
ENSCING00000002232	-	86	37.037	ENSCGRG00000016821	Wrn	90	36.944	Cricetulus_griseus_crigri
ENSCING00000002232	-	68	41.777	ENSDARG00000098211	wrn	59	41.067	Danio_rerio
ENSCING00000002232	-	96	34.951	ENSDNOG00000008481	WRN	84	34.786	Dasypus_novemcinctus
ENSCING00000002232	-	69	40.524	ENSDORG00000002696	Wrn	57	40.094	Dipodomys_ordii
ENSCING00000002232	-	69	40.286	ENSEASG00005016813	WRN	81	37.357	Equus_asinus_asinus
ENSCING00000002232	-	67	42.823	ENSECAG00000000110	WRN	63	39.413	Equus_caballus
ENSCING00000002232	-	68	40.877	ENSELUG00000017817	wrn	70	41.439	Esox_lucius
ENSCING00000002232	-	77	36.991	ENSFCAG00000024759	WRN	62	36.886	Felis_catus
ENSCING00000002232	-	95	35.304	ENSFDAG00000008637	WRN	72	36.837	Fukomys_damarensis
ENSCING00000002232	-	70	40.883	ENSGALG00000040909	WRN	61	38.391	Gallus_gallus
ENSCING00000002232	-	80	40.120	ENSGAGG00000022647	WRN	66	40.303	Gopherus_agassizii
ENSCING00000002232	-	75	38.519	ENSGGOG00000022154	WRN	66	36.733	Gorilla_gorilla
ENSCING00000002232	-	86	36.528	ENSHGLG00000003638	WRN	73	36.528	Heterocephalus_glaber_female
ENSCING00000002232	-	67	42.488	ENSIPUG00000002090	wrn	71	37.001	Ictalurus_punctatus
ENSCING00000002232	-	69	40.544	ENSSTOG00000013599	WRN	58	39.657	Ictidomys_tridecemlineatus
ENSCING00000002232	-	84	36.583	ENSJJAG00000015655	Wrn	70	36.390	Jaculus_jaculus
ENSCING00000002232	-	68	41.617	ENSLACG00000001569	-	55	41.260	Latimeria_chalumnae
ENSCING00000002232	-	69	43.891	ENSLOCG00000010792	wrn	61	42.220	Lepisosteus_oculatus
ENSCING00000002232	-	69	40.047	ENSLAFG00000004434	WRN	60	39.728	Loxodonta_africana
ENSCING00000002232	-	69	41.266	ENSMFAG00000043428	WRN	66	38.032	Macaca_fascicularis
ENSCING00000002232	-	69	41.383	ENSMMUG00000022655	WRN	66	38.134	Macaca_mulatta
ENSCING00000002232	-	69	41.501	ENSMNEG00000032617	WRN	65	38.235	Macaca_nemestrina
ENSCING00000002232	-	70	41.082	ENSMLEG00000038296	WRN	64	38.737	Mandrillus_leucophaeus
ENSCING00000002232	-	70	41.590	ENSMGAG00000004960	WRN	56	41.542	Meleagris_gallopavo
ENSCING00000002232	-	86	36.405	ENSMAUG00000016235	Wrn	74	36.405	Mesocricetus_auratus
ENSCING00000002232	-	69	40.283	ENSMICG00000010630	WRN	57	40.070	Microcebus_murinus
ENSCING00000002232	-	69	40.855	ENSMOCG00000013972	Wrn	58	40.931	Microtus_ochrogaster
ENSCING00000002232	-	69	41.417	ENSMODG00000018997	WRN	58	41.367	Monodelphis_domestica
ENSCING00000002232	-	70	40.578	MGP_CAROLIEiJ_G0030961	Wrn	60	40.578	Mus_caroli
ENSCING00000002232	-	70	40.324	ENSMUSG00000031583	Wrn	72	40.324	Mus_musculus
ENSCING00000002232	-	70	40.115	MGP_PahariEiJ_G0021430	Wrn	60	40.115	Mus_pahari
ENSCING00000002232	-	70	40.324	MGP_SPRETEiJ_G0032079	Wrn	60	40.324	Mus_spretus
ENSCING00000002232	-	69	41.958	ENSMPUG00000010201	WRN	66	39.734	Mustela_putorius_furo
ENSCING00000002232	-	69	41.299	ENSMLUG00000005863	WRN	67	38.415	Myotis_lucifugus
ENSCING00000002232	-	69	40.235	ENSNGAG00000018413	Wrn	63	38.859	Nannospalax_galili
ENSCING00000002232	-	75	38.758	ENSNLEG00000012006	WRN	64	37.618	Nomascus_leucogenys
ENSCING00000002232	-	72	39.096	ENSODEG00000004076	WRN	62	38.983	Octodon_degus
ENSCING00000002232	-	79	39.530	ENSOANG00000005952	-	61	42.568	Ornithorhynchus_anatinus
ENSCING00000002232	-	70	40.556	ENSOCUG00000012620	WRN	54	40.556	Oryctolagus_cuniculus
ENSCING00000002232	-	69	39.836	ENSOGAG00000009600	WRN	60	39.836	Otolemur_garnettii
ENSCING00000002232	-	69	40.306	ENSOARG00000000163	WRN	64	38.307	Ovis_aries
ENSCING00000002232	-	70	40.347	ENSPPAG00000036871	WRN	59	40.231	Pan_paniscus
ENSCING00000002232	-	79	38.878	ENSPPRG00000010928	WRN	66	38.776	Panthera_pardus
ENSCING00000002232	-	79	38.878	ENSPTIG00000020609	WRN	66	38.776	Panthera_tigris_altaica
ENSCING00000002232	-	70	40.462	ENSPTRG00000020145	WRN	64	37.744	Pan_troglodytes
ENSCING00000002232	-	70	39.954	ENSPANG00000018594	WRN	66	37.097	Papio_anubis
ENSCING00000002232	-	72	36.994	ENSPKIG00000025497	wrn	60	46.168	Paramormyrops_kingsleyae
ENSCING00000002232	-	71	42.563	ENSPSIG00000013411	WRN	64	40.081	Pelodiscus_sinensis
ENSCING00000002232	-	86	36.567	ENSPEMG00000020615	Wrn	90	36.567	Peromyscus_maniculatus_bairdii
ENSCING00000002232	-	73	40.389	ENSPCIG00000020146	WRN	68	38.066	Phascolarctos_cinereus
ENSCING00000002232	-	69	40.515	ENSPPYG00000018494	WRN	64	37.757	Pongo_abelii
ENSCING00000002232	-	73	47.727	ENSPCAG00000013763	WRN	53	47.727	Procavia_capensis
ENSCING00000002232	-	63	52.381	ENSPVAG00000012909	WRN	55	38.158	Pteropus_vampyrus
ENSCING00000002232	-	72	41.196	ENSPNAG00000021848	wrn	61	40.444	Pygocentrus_nattereri
ENSCING00000002232	-	86	36.421	ENSRNOG00000015440	Wrn	74	36.421	Rattus_norvegicus
ENSCING00000002232	-	70	41.082	ENSRBIG00000031825	WRN	67	40.940	Rhinopithecus_bieti
ENSCING00000002232	-	70	41.082	ENSRROG00000045381	WRN	67	37.598	Rhinopithecus_roxellana
ENSCING00000002232	-	79	38.820	ENSSBOG00000027238	WRN	69	36.624	Saimiri_boliviensis_boliviensis
ENSCING00000002232	-	72	40.852	ENSSHAG00000005577	WRN	61	40.766	Sarcophilus_harrisii
ENSCING00000002232	-	68	41.959	ENSSFOG00015006123	wrn	59	41.849	Scleropages_formosus
ENSCING00000002232	-	69	40.840	ENSSSCG00000015840	WRN	61	40.650	Sus_scrofa
ENSCING00000002232	-	60	42.091	ENSTTRG00000012302	WRN	53	41.823	Tursiops_truncatus
ENSCING00000002232	-	69	39.813	ENSUAMG00000021324	WRN	59	39.253	Ursus_americanus
ENSCING00000002232	-	58	42.937	ENSUMAG00000007159	WRN	58	42.148	Ursus_maritimus
ENSCING00000002232	-	62	47.571	ENSVPAG00000011004	WRN	51	47.571	Vicugna_pacos
ENSCING00000002232	-	78	38.809	ENSVVUG00000019867	WRN	58	40.544	Vulpes_vulpes
ENSCING00000002232	-	69	41.253	ENSXETG00000018302	wrn	76	38.075	Xenopus_tropicalis