EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002364 (Gene tree)
Gene ID: 100177064
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3448 bases
Position: chr7:5600871-5604318
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000004807	RIO1	PF01163.22	3.5e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000004807	-	1558	-	ENSCINP00000004807	504 (aa)	-	F6RA65

Gene Model

Click here to download ENSCING00000002364's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002364	-	99	50.725	ENSG00000058729	RIOK2	81	70.874	Homo_sapiens
ENSCING00000002364	-	63	67.500	ENSAPOG00000011797	riok2	99	52.542	Acanthochromis_polyacanthus
ENSCING00000002364	-	99	50.628	ENSAMEG00000014615	RIOK2	75	70.874	Ailuropoda_melanoleuca
ENSCING00000002364	-	78	45.434	ENSACIG00000020646	riok2	88	47.458	Amphilophus_citrinellus
ENSCING00000002364	-	63	67.812	ENSAOCG00000021840	riok2	99	50.947	Amphiprion_ocellaris
ENSCING00000002364	-	63	67.812	ENSAPEG00000020853	riok2	99	50.947	Amphiprion_percula
ENSCING00000002364	-	63	68.438	ENSATEG00000005671	riok2	99	51.796	Anabas_testudineus
ENSCING00000002364	-	99	52.477	ENSACAG00000011858	RIOK2	58	71.429	Anolis_carolinensis
ENSCING00000002364	-	99	49.545	ENSACLG00000002755	riok2	59	67.500	Astatotilapia_calliptera
ENSCING00000002364	-	99	53.714	ENSAMXG00000002368	riok2	99	53.065	Astyanax_mexicanus
ENSCING00000002364	-	61	56.958	WBGene00013688	riok-2	58	56.958	Caenorhabditis_elegans
ENSCING00000002364	-	99	51.920	ENSCJAG00000040045	RIOK2	99	50.365	Callithrix_jacchus
ENSCING00000002364	-	99	51.091	ENSCAFG00000007745	RIOK2	99	49.455	Canis_familiaris
ENSCING00000002364	-	99	50.182	ENSCAFG00020011453	-	99	49.270	Canis_lupus_dingo
ENSCING00000002364	-	64	60.542	ENSCAFG00020015532	-	80	64.407	Canis_lupus_dingo
ENSCING00000002364	-	99	51.429	ENSCHIG00000016709	RIOK2	99	50.450	Capra_hircus
ENSCING00000002364	-	95	48.713	ENSCAPG00000006762	RIOK2	99	48.898	Cavia_aperea
ENSCING00000002364	-	99	51.543	ENSCPOG00000010551	RIOK2	99	51.273	Cavia_porcellus
ENSCING00000002364	-	99	51.642	ENSCCAG00000025712	RIOK2	99	50.730	Cebus_capucinus
ENSCING00000002364	-	99	51.993	ENSCATG00000035047	RIOK2	76	71.521	Cercocebus_atys
ENSCING00000002364	-	99	50.817	ENSCLAG00000006790	RIOK2	99	50.545	Chinchilla_lanigera
ENSCING00000002364	-	65	50.269	ENSCSAG00000014233	RIOK2	55	71.292	Chlorocebus_sabaeus
ENSCING00000002364	-	99	52.415	ENSCPBG00000015732	RIOK2	83	69.841	Chrysemys_picta_bellii
ENSCING00000002364	-	99	71.961	ENSCSAVG00000006970	-	99	69.380	Ciona_savignyi
ENSCING00000002364	-	99	53.565	ENSCSEG00000014204	riok2	99	52.345	Cynoglossus_semilaevis
ENSCING00000002364	-	99	53.257	ENSCVAG00000012034	riok2	99	51.985	Cyprinodon_variegatus
ENSCING00000002364	-	99	54.951	ENSDARG00000035264	riok2	99	53.920	Danio_rerio
ENSCING00000002364	-	98	43.364	FBgn0039306	RIOK2	99	44.382	Drosophila_melanogaster
ENSCING00000002364	-	81	47.085	ENSEBUG00000006099	riok2	77	47.392	Eptatretus_burgeri
ENSCING00000002364	-	99	51.254	ENSEASG00005018799	RIOK2	73	70.227	Equus_asinus_asinus
ENSCING00000002364	-	99	49.730	ENSECAG00000018441	RIOK2	74	68.889	Equus_caballus
ENSCING00000002364	-	87	49.490	ENSEEUG00000013535	RIOK2	53	49.490	Erinaceus_europaeus
ENSCING00000002364	-	75	70.833	ENSELUG00000011239	riok2	98	65.123	Esox_lucius
ENSCING00000002364	-	99	50.903	ENSFCAG00000024077	RIOK2	99	49.910	Felis_catus
ENSCING00000002364	-	58	69.283	ENSFALG00000010277	RIOK2	55	69.416	Ficedula_albicollis
ENSCING00000002364	-	99	51.188	ENSFDAG00000015288	RIOK2	56	71.197	Fukomys_damarensis
ENSCING00000002364	-	99	50.385	ENSFHEG00000010950	riok2	60	68.831	Fundulus_heteroclitus
ENSCING00000002364	-	63	67.508	ENSGMOG00000011354	riok2	59	68.608	Gadus_morhua
ENSCING00000002364	-	99	50.000	ENSGALG00000015288	RIOK2	75	69.524	Gallus_gallus
ENSCING00000002364	-	99	51.650	ENSGAFG00000012056	riok2	99	51.509	Gambusia_affinis
ENSCING00000002364	-	61	67.857	ENSGACG00000009754	riok2	99	49.146	Gasterosteus_aculeatus
ENSCING00000002364	-	99	51.163	ENSGAGG00000013791	RIOK2	82	70.159	Gopherus_agassizii
ENSCING00000002364	-	99	50.906	ENSGGOG00000022136	RIOK2	81	70.874	Gorilla_gorilla
ENSCING00000002364	-	99	50.380	ENSHBUG00000010705	riok2	99	50.383	Haplochromis_burtoni
ENSCING00000002364	-	93	62.169	ENSHGLG00000009139	-	74	70.550	Heterocephalus_glaber_female
ENSCING00000002364	-	99	50.547	ENSHGLG00100014700	RIOK2	74	70.550	Heterocephalus_glaber_male
ENSCING00000002364	-	62	69.968	ENSHCOG00000015555	riok2	99	51.306	Hippocampus_comes
ENSCING00000002364	-	99	52.919	ENSIPUG00000007450	riok2	99	52.830	Ictalurus_punctatus
ENSCING00000002364	-	99	51.548	ENSJJAG00000016582	Riok2	56	70.550	Jaculus_jaculus
ENSCING00000002364	-	99	52.140	ENSKMAG00000013229	riok2	99	50.752	Kryptolebias_marmoratus
ENSCING00000002364	-	99	52.571	ENSLBEG00000015421	riok2	99	51.498	Labrus_bergylta
ENSCING00000002364	-	99	51.282	ENSLACG00000000274	RIOK2	99	50.642	Latimeria_chalumnae
ENSCING00000002364	-	99	52.783	ENSLOCG00000006432	riok2	99	52.399	Lepisosteus_oculatus
ENSCING00000002364	-	99	50.540	ENSLAFG00000000919	RIOK2	56	70.550	Loxodonta_africana
ENSCING00000002364	-	87	49.284	ENSMLEG00000040038	RIOK2	72	71.138	Mandrillus_leucophaeus
ENSCING00000002364	-	99	51.119	ENSMAMG00000013310	riok2	80	62.500	Mastacembelus_armatus
ENSCING00000002364	-	63	67.500	ENSMZEG00005017067	riok2	99	49.639	Maylandia_zebra
ENSCING00000002364	-	96	47.628	ENSMGAG00000006986	RIOK2	72	69.024	Meleagris_gallopavo
ENSCING00000002364	-	99	50.722	ENSMICG00000037437	RIOK2	56	70.227	Microcebus_murinus
ENSCING00000002364	-	80	70.779	ENSMOCG00000004230	Riok2	75	70.550	Microtus_ochrogaster
ENSCING00000002364	-	63	68.750	ENSMMOG00000018155	riok2	99	52.514	Mola_mola
ENSCING00000002364	-	99	50.279	ENSMALG00000011266	riok2	60	68.125	Monopterus_albus
ENSCING00000002364	-	99	51.002	ENSMUSG00000116564	Riok2	99	71.094	Mus_musculus
ENSCING00000002364	-	99	50.272	ENSMPUG00000004450	RIOK2	75	70.550	Mustela_putorius_furo
ENSCING00000002364	-	99	51.455	ENSMLUG00000016113	RIOK2	76	70.550	Myotis_lucifugus
ENSCING00000002364	-	99	51.899	ENSNLEG00000014474	RIOK2	73	71.521	Nomascus_leucogenys
ENSCING00000002364	-	92	43.396	ENSMEUG00000010529	RIOK2	60	55.137	Notamacropus_eugenii
ENSCING00000002364	-	99	49.718	ENSONIG00000013689	riok2	99	50.844	Oreochromis_niloticus
ENSCING00000002364	-	61	69.481	ENSORLG00020011553	riok2	99	51.326	Oryzias_latipes_hni
ENSCING00000002364	-	99	50.958	ENSORLG00015001085	riok2	99	50.659	Oryzias_latipes_hsok
ENSCING00000002364	-	63	68.438	ENSOMEG00000004617	riok2	99	52.874	Oryzias_melastigma
ENSCING00000002364	-	99	47.764	ENSPPAG00000027414	RIOK2	65	70.550	Pan_paniscus
ENSCING00000002364	-	99	50.722	ENSPPRG00000000169	RIOK2	99	49.730	Panthera_pardus
ENSCING00000002364	-	99	50.542	ENSPTIG00000008344	RIOK2	99	49.730	Panthera_tigris_altaica
ENSCING00000002364	-	99	50.181	ENSPTRG00000017100	RIOK2	81	70.550	Pan_troglodytes
ENSCING00000002364	-	99	51.993	ENSPANG00000011977	RIOK2	76	71.521	Papio_anubis
ENSCING00000002364	-	99	51.193	ENSPKIG00000016220	riok2	82	70.288	Paramormyrops_kingsleyae
ENSCING00000002364	-	99	53.891	ENSPMGG00000021822	riok2	99	53.502	Periophthalmus_magnuspinnatus
ENSCING00000002364	-	99	52.233	ENSPFOG00000017064	riok2	99	50.094	Poecilia_formosa
ENSCING00000002364	-	99	51.625	ENSPLAG00000003043	riok2	99	50.279	Poecilia_latipinna
ENSCING00000002364	-	99	52.107	ENSPMEG00000007622	riok2	59	70.455	Poecilia_mexicana
ENSCING00000002364	-	61	71.429	ENSPREG00000002255	riok2	99	51.020	Poecilia_reticulata
ENSCING00000002364	-	99	51.268	ENSPPYG00000015654	RIOK2	81	70.874	Pongo_abelii
ENSCING00000002364	-	99	49.186	ENSPCAG00000006508	RIOK2	67	69.903	Procavia_capensis
ENSCING00000002364	-	83	63.128	ENSPVAG00000016658	RIOK2	67	69.579	Pteropus_vampyrus
ENSCING00000002364	-	99	49.635	ENSPNYG00000018868	riok2	99	48.736	Pundamilia_nyererei
ENSCING00000002364	-	99	53.772	ENSPNAG00000010841	riok2	99	53.398	Pygocentrus_nattereri
ENSCING00000002364	-	75	40.640	YNL207W	-	78	45.482	Saccharomyces_cerevisiae
ENSCING00000002364	-	99	51.993	ENSSBOG00000032152	RIOK2	57	70.662	Saimiri_boliviensis_boliviensis
ENSCING00000002364	-	82	70.032	ENSSHAG00000006935	-	74	70.159	Sarcophilus_harrisii
ENSCING00000002364	-	99	51.661	ENSSFOG00015005966	riok2	58	71.565	Scleropages_formosus
ENSCING00000002364	-	99	52.519	ENSSMAG00000010529	riok2	99	52.264	Scophthalmus_maximus
ENSCING00000002364	-	99	52.207	ENSSDUG00000014891	riok2	99	53.155	Seriola_dumerili
ENSCING00000002364	-	61	69.481	ENSSLDG00000001926	riok2	99	51.613	Seriola_lalandi_dorsalis
ENSCING00000002364	-	99	45.083	ENSSARG00000001798	RIOK2	69	61.165	Sorex_araneus
ENSCING00000002364	-	63	68.139	ENSSPUG00000003509	RIOK2	75	68.139	Sphenodon_punctatus
ENSCING00000002364	-	59	67.568	ENSSPAG00000016554	riok2	58	67.568	Stegastes_partitus
ENSCING00000002364	-	99	49.639	ENSTGUG00000001223	RIOK2	77	69.085	Taeniopygia_guttata
ENSCING00000002364	-	63	68.750	ENSTRUG00000011455	riok2	99	51.595	Takifugu_rubripes
ENSCING00000002364	-	79	48.792	ENSTNIG00000015401	riok2	99	46.588	Tetraodon_nigroviridis
ENSCING00000002364	-	95	49.251	ENSUAMG00000008585	RIOK2	74	71.228	Ursus_americanus
ENSCING00000002364	-	99	50.000	ENSUMAG00000006726	RIOK2	75	70.874	Ursus_maritimus
ENSCING00000002364	-	57	72.959	ENSVPAG00000001542	RIOK2	54	72.959	Vicugna_pacos
ENSCING00000002364	-	99	51.845	ENSXETG00000013194	riok2	99	51.756	Xenopus_tropicalis
ENSCING00000002364	-	99	51.931	ENSXCOG00000016879	riok2	63	69.805	Xiphophorus_couchianus
ENSCING00000002364	-	99	51.931	ENSXMAG00000007425	riok2	60	69.805	Xiphophorus_maculatus