EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002386 (Gene tree)
Gene ID: 100175648
Gene Symbol: -
Alias: -
Full Name: pre-rRNA-processing protein TSR2 homolog
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2289 bases
Position: chr1:2622952-2625240
Accession: 100175648
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000004872	WGG	PF10273.9	1.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000004872	-	726	XM_002119670	ENSCINP00000004872	194 (aa)	XP_002119706	F6QZE9

Gene Model

Click here to download ENSCING00000002386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002386	-	63	37.398	ENSG00000158526	TSR2	100	33.333	Homo_sapiens
ENSCING00000002386	-	96	34.010	ENSAMEG00000002469	TSR2	96	34.010	Ailuropoda_melanoleuca
ENSCING00000002386	-	59	37.719	ENSACIG00000004880	tsr2	79	37.719	Amphilophus_citrinellus
ENSCING00000002386	-	59	35.088	ENSAOCG00000015893	tsr2	63	35.088	Amphiprion_ocellaris
ENSCING00000002386	-	59	35.088	ENSAPEG00000023549	tsr2	63	35.088	Amphiprion_percula
ENSCING00000002386	-	59	34.211	ENSATEG00000019009	-	66	34.211	Anabas_testudineus
ENSCING00000002386	-	58	41.593	ENSACAG00000012270	TSR2	99	32.663	Anolis_carolinensis
ENSCING00000002386	-	63	39.024	ENSANAG00000000062	TSR2	100	33.500	Aotus_nancymaae
ENSCING00000002386	-	59	37.719	ENSACLG00000014269	tsr2	66	37.719	Astatotilapia_calliptera
ENSCING00000002386	-	98	32.143	ENSAMXG00000016817	tsr2	88	31.443	Astyanax_mexicanus
ENSCING00000002386	-	51	34.694	ENSBTAG00000018311	-	53	34.694	Bos_taurus
ENSCING00000002386	-	99	34.343	ENSBTAG00000015858	TSR2	99	34.343	Bos_taurus
ENSCING00000002386	-	60	40.833	ENSCJAG00000000251	TSR2	100	34.000	Callithrix_jacchus
ENSCING00000002386	-	96	32.143	ENSCAFG00000016440	TSR2	96	32.143	Canis_familiaris
ENSCING00000002386	-	96	32.143	ENSCAFG00020014044	TSR2	96	32.143	Canis_lupus_dingo
ENSCING00000002386	-	76	30.612	ENSCHIG00000009963	-	77	30.612	Capra_hircus
ENSCING00000002386	-	95	34.031	ENSTSYG00000005670	-	95	34.031	Carlito_syrichta
ENSCING00000002386	-	63	34.426	ENSTSYG00000031644	-	68	34.426	Carlito_syrichta
ENSCING00000002386	-	55	37.273	ENSCPOG00000033139	TSR2	94	31.720	Cavia_porcellus
ENSCING00000002386	-	60	40.833	ENSCCAG00000025421	TSR2	100	34.000	Cebus_capucinus
ENSCING00000002386	-	60	39.167	ENSCATG00000036868	-	100	33.163	Cercocebus_atys
ENSCING00000002386	-	56	38.182	ENSCATG00000045152	-	97	31.937	Cercocebus_atys
ENSCING00000002386	-	95	32.632	ENSCLAG00000007235	TSR2	95	32.632	Chinchilla_lanigera
ENSCING00000002386	-	60	39.167	ENSCSAG00000012366	-	71	37.778	Chlorocebus_sabaeus
ENSCING00000002386	-	59	38.136	ENSCSAG00000000402	-	97	33.862	Chlorocebus_sabaeus
ENSCING00000002386	-	57	39.823	ENSCHOG00000001068	TSR2	96	33.846	Choloepus_hoffmanni
ENSCING00000002386	-	100	67.010	ENSCSAVG00000009298	-	100	67.010	Ciona_savignyi
ENSCING00000002386	-	60	39.167	ENSCANG00000043156	-	100	33.163	Colobus_angolensis_palliatus
ENSCING00000002386	-	60	40.833	ENSCGRG00001023321	Tsr2	95	32.461	Cricetulus_griseus_chok1gshd
ENSCING00000002386	-	60	40.833	ENSCGRG00000010855	Tsr2	95	34.694	Cricetulus_griseus_crigri
ENSCING00000002386	-	58	33.913	ENSCSEG00000017003	tsr2	66	33.913	Cynoglossus_semilaevis
ENSCING00000002386	-	55	39.623	ENSDARG00000005772	tsr2	95	33.511	Danio_rerio
ENSCING00000002386	-	52	42.574	ENSDORG00000025574	Tsr2	53	42.574	Dipodomys_ordii
ENSCING00000002386	-	53	41.748	ENSETEG00000018510	TSR2	96	32.653	Echinops_telfairi
ENSCING00000002386	-	93	34.444	ENSEBUG00000012895	tsr2	92	34.444	Eptatretus_burgeri
ENSCING00000002386	-	95	33.511	ENSEASG00005013005	TSR2	95	33.511	Equus_asinus_asinus
ENSCING00000002386	-	95	33.511	ENSECAG00000029844	TSR2	82	33.511	Equus_caballus
ENSCING00000002386	-	96	33.679	ENSFCAG00000002226	TSR2	96	33.679	Felis_catus
ENSCING00000002386	-	94	32.258	ENSFDAG00000011554	TSR2	94	32.258	Fukomys_damarensis
ENSCING00000002386	-	59	35.088	ENSGACG00000000595	tsr2	66	35.088	Gasterosteus_aculeatus
ENSCING00000002386	-	55	40.566	ENSGAGG00000007629	TSR2	58	40.566	Gopherus_agassizii
ENSCING00000002386	-	63	37.398	ENSGGOG00000041368	TSR2	100	33.333	Gorilla_gorilla
ENSCING00000002386	-	59	37.719	ENSHBUG00000020989	tsr2	52	37.719	Haplochromis_burtoni
ENSCING00000002386	-	95	32.086	ENSHGLG00000002188	TSR2	95	32.086	Heterocephalus_glaber_female
ENSCING00000002386	-	95	32.086	ENSHGLG00100001234	TSR2	95	32.086	Heterocephalus_glaber_male
ENSCING00000002386	-	59	35.088	ENSHCOG00000017585	-	54	35.088	Hippocampus_comes
ENSCING00000002386	-	59	37.391	ENSIPUG00000012170	tsr2	60	37.391	Ictalurus_punctatus
ENSCING00000002386	-	95	32.620	ENSSTOG00000033612	TSR2	95	32.620	Ictidomys_tridecemlineatus
ENSCING00000002386	-	55	40.000	ENSJJAG00000004561	Tsr2	56	40.000	Jaculus_jaculus
ENSCING00000002386	-	56	37.838	ENSLAFG00000018093	TSR2	95	32.990	Loxodonta_africana
ENSCING00000002386	-	60	39.167	ENSMFAG00000001364	TSR2	100	33.163	Macaca_fascicularis
ENSCING00000002386	-	59	37.391	ENSMMUG00000010044	-	98	32.984	Macaca_mulatta
ENSCING00000002386	-	60	39.167	ENSMMUG00000012612	TSR2	100	33.163	Macaca_mulatta
ENSCING00000002386	-	60	39.167	ENSMNEG00000041996	TSR2	100	33.163	Macaca_nemestrina
ENSCING00000002386	-	60	39.167	ENSMLEG00000032632	TSR2	100	33.163	Mandrillus_leucophaeus
ENSCING00000002386	-	59	35.965	ENSMAMG00000011540	tsr2	67	35.965	Mastacembelus_armatus
ENSCING00000002386	-	59	37.719	ENSMZEG00005026752	tsr2	66	37.719	Maylandia_zebra
ENSCING00000002386	-	60	40.000	ENSMAUG00000012389	Tsr2	64	38.710	Mesocricetus_auratus
ENSCING00000002386	-	95	34.211	ENSMICG00000010116	TSR2	95	34.211	Microcebus_murinus
ENSCING00000002386	-	52	44.000	ENSMOCG00000006662	Tsr2	52	44.000	Microtus_ochrogaster
ENSCING00000002386	-	59	32.456	ENSMMOG00000009751	-	62	32.456	Mola_mola
ENSCING00000002386	-	59	36.842	ENSMALG00000014552	tsr2	67	36.842	Monopterus_albus
ENSCING00000002386	-	62	39.024	MGP_CAROLIEiJ_G0033491	Tsr2	64	39.024	Mus_caroli
ENSCING00000002386	-	94	32.086	ENSMUSG00000025264	Tsr2	94	32.086	Mus_musculus
ENSCING00000002386	-	94	32.086	MGP_SPRETEiJ_G0034661	Tsr2	94	32.086	Mus_spretus
ENSCING00000002386	-	53	42.718	ENSMPUG00000011436	TSR2	54	42.718	Mustela_putorius_furo
ENSCING00000002386	-	94	33.333	ENSNGAG00000021351	Tsr2	94	34.392	Nannospalax_galili
ENSCING00000002386	-	59	37.719	ENSNBRG00000007965	tsr2	66	37.719	Neolamprologus_brichardi
ENSCING00000002386	-	60	39.167	ENSNLEG00000030041	TSR2	100	33.831	Nomascus_leucogenys
ENSCING00000002386	-	55	37.273	ENSOPRG00000016595	TSR2	87	37.273	Ochotona_princeps
ENSCING00000002386	-	88	31.250	ENSODEG00000019951	-	97	31.250	Octodon_degus
ENSCING00000002386	-	95	33.158	ENSODEG00000014931	-	99	33.158	Octodon_degus
ENSCING00000002386	-	96	32.275	ENSODEG00000000542	-	96	32.275	Octodon_degus
ENSCING00000002386	-	59	39.474	ENSONIG00000000763	tsr2	65	39.474	Oreochromis_niloticus
ENSCING00000002386	-	59	40.870	ENSOANG00000000707	TSR2	82	40.870	Ornithorhynchus_anatinus
ENSCING00000002386	-	95	32.620	ENSOCUG00000027678	-	95	32.620	Oryctolagus_cuniculus
ENSCING00000002386	-	86	31.395	ENSOCUG00000014714	-	100	31.395	Oryctolagus_cuniculus
ENSCING00000002386	-	59	34.211	ENSORLG00000022662	tsr2	66	34.211	Oryzias_latipes
ENSCING00000002386	-	59	34.211	ENSORLG00020003033	tsr2	66	34.211	Oryzias_latipes_hni
ENSCING00000002386	-	59	34.211	ENSORLG00015017253	tsr2	66	34.211	Oryzias_latipes_hsok
ENSCING00000002386	-	59	34.211	ENSOMEG00000013975	-	66	34.211	Oryzias_melastigma
ENSCING00000002386	-	59	34.211	ENSOMEG00000011483	tsr2	66	34.211	Oryzias_melastigma
ENSCING00000002386	-	99	31.156	ENSOGAG00000003468	TSR2	100	31.156	Otolemur_garnettii
ENSCING00000002386	-	99	34.343	ENSOARG00000006467	-	99	34.343	Ovis_aries
ENSCING00000002386	-	75	31.034	ENSOARG00000009487	-	84	31.034	Ovis_aries
ENSCING00000002386	-	63	37.398	ENSPPAG00000021242	TSR2	100	33.333	Pan_paniscus
ENSCING00000002386	-	96	33.679	ENSPPRG00000001337	TSR2	96	33.679	Panthera_pardus
ENSCING00000002386	-	66	38.636	ENSPTIG00000007138	TSR2	69	38.636	Panthera_tigris_altaica
ENSCING00000002386	-	63	37.398	ENSPTRG00000045904	TSR2	100	33.333	Pan_troglodytes
ENSCING00000002386	-	60	39.167	ENSPANG00000008042	-	100	33.163	Papio_anubis
ENSCING00000002386	-	55	36.792	ENSPANG00000002291	-	96	32.418	Papio_anubis
ENSCING00000002386	-	69	30.935	ENSPMGG00000002963	tsr2	86	30.935	Periophthalmus_magnuspinnatus
ENSCING00000002386	-	65	37.984	ENSPEMG00000015713	Tsr2	94	33.333	Peromyscus_maniculatus_bairdii
ENSCING00000002386	-	58	40.708	ENSPMAG00000001705	tsr2	96	31.818	Petromyzon_marinus
ENSCING00000002386	-	71	38.028	ENSPCIG00000024314	-	68	38.028	Phascolarctos_cinereus
ENSCING00000002386	-	59	35.593	ENSPFOG00000011824	tsr2	67	35.593	Poecilia_formosa
ENSCING00000002386	-	59	36.842	ENSPLAG00000023520	tsr2	66	36.842	Poecilia_latipinna
ENSCING00000002386	-	59	36.842	ENSPMEG00000000360	tsr2	66	36.842	Poecilia_mexicana
ENSCING00000002386	-	59	35.965	ENSPREG00000013009	tsr2	66	35.965	Poecilia_reticulata
ENSCING00000002386	-	63	37.398	ENSPPYG00000020381	-	72	33.333	Pongo_abelii
ENSCING00000002386	-	95	33.684	ENSPCOG00000002354	TSR2	95	33.684	Propithecus_coquereli
ENSCING00000002386	-	58	38.261	ENSPVAG00000000034	TSR2	95	38.261	Pteropus_vampyrus
ENSCING00000002386	-	59	37.719	ENSPNYG00000019995	tsr2	52	37.719	Pundamilia_nyererei
ENSCING00000002386	-	59	36.842	ENSPNAG00000024167	tsr2	99	32.487	Pygocentrus_nattereri
ENSCING00000002386	-	99	31.313	ENSRNOG00000002556	NEWGENE_1562416	99	31.313	Rattus_norvegicus
ENSCING00000002386	-	60	39.167	ENSRBIG00000024521	-	100	33.163	Rhinopithecus_bieti
ENSCING00000002386	-	60	34.167	ENSRBIG00000003999	-	90	30.653	Rhinopithecus_bieti
ENSCING00000002386	-	60	39.167	ENSRROG00000029439	-	100	33.163	Rhinopithecus_roxellana
ENSCING00000002386	-	60	34.167	ENSRROG00000033469	-	93	31.034	Rhinopithecus_roxellana
ENSCING00000002386	-	60	40.833	ENSSBOG00000019737	TSR2	100	34.000	Saimiri_boliviensis_boliviensis
ENSCING00000002386	-	69	33.784	ENSSHAG00000004824	-	90	33.784	Sarcophilus_harrisii
ENSCING00000002386	-	55	41.509	ENSSFOG00015002207	tsr2	95	32.432	Scleropages_formosus
ENSCING00000002386	-	59	35.088	ENSSDUG00000019445	tsr2	64	35.088	Seriola_dumerili
ENSCING00000002386	-	59	35.088	ENSSLDG00000005598	tsr2	64	35.088	Seriola_lalandi_dorsalis
ENSCING00000002386	-	54	41.905	ENSSPUG00000019286	TSR2	58	41.905	Sphenodon_punctatus
ENSCING00000002386	-	99	35.500	ENSSSCG00000012334	TSR2	100	35.500	Sus_scrofa
ENSCING00000002386	-	59	37.719	ENSTRUG00000008947	tsr2	64	37.719	Takifugu_rubripes
ENSCING00000002386	-	50	32.990	ENSTNIG00000002173	-	61	32.990	Tetraodon_nigroviridis
ENSCING00000002386	-	60	37.500	ENSTBEG00000016242	TSR2	95	35.971	Tupaia_belangeri
ENSCING00000002386	-	96	33.679	ENSUAMG00000009605	TSR2	96	33.679	Ursus_americanus
ENSCING00000002386	-	96	33.679	ENSUMAG00000019189	TSR2	96	33.679	Ursus_maritimus
ENSCING00000002386	-	96	33.166	ENSVVUG00000002247	TSR2	95	33.166	Vulpes_vulpes
ENSCING00000002386	-	58	39.823	ENSXETG00000033574	TSR2	59	39.823	Xenopus_tropicalis
ENSCING00000002386	-	59	35.965	ENSXMAG00000024827	tsr2	60	35.965	Xiphophorus_maculatus