EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002405 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2163 bases
Position: chr1:2626595-2628757
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000025122	PTS_2-RNA	PF01885.16	1.6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000025368	-	893	-	ENSCINP00000025122	184 (aa)	-	F6RKY2

Gene Model

Click here to download ENSCING00000002405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002405's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002405	-	77	45.833	ENSG00000149743	TRPT1	70	49.383	Homo_sapiens
ENSCING00000002405	-	77	45.205	ENSAPOG00000012925	trpt1	63	45.205	Acanthochromis_polyacanthus
ENSCING00000002405	-	84	45.570	ENSAMEG00000018040	TRPT1	62	45.570	Ailuropoda_melanoleuca
ENSCING00000002405	-	77	45.205	ENSACIG00000022413	trpt1	64	45.205	Amphilophus_citrinellus
ENSCING00000002405	-	77	45.890	ENSAOCG00000001163	trpt1	55	45.890	Amphiprion_ocellaris
ENSCING00000002405	-	77	45.890	ENSAPEG00000009873	trpt1	63	45.890	Amphiprion_percula
ENSCING00000002405	-	76	45.833	ENSATEG00000014371	trpt1	62	45.833	Anabas_testudineus
ENSCING00000002405	-	77	44.444	ENSACAG00000000696	TRPT1	64	44.444	Anolis_carolinensis
ENSCING00000002405	-	77	47.222	ENSANAG00000019580	TRPT1	57	47.222	Aotus_nancymaae
ENSCING00000002405	-	83	42.949	ENSACLG00000016893	trpt1	62	45.139	Astatotilapia_calliptera
ENSCING00000002405	-	82	43.791	ENSAMXG00000010533	trpt1	64	45.890	Astyanax_mexicanus
ENSCING00000002405	-	88	42.945	ENSBTAG00000016555	TRPT1	79	42.945	Bos_taurus
ENSCING00000002405	-	77	47.945	ENSCJAG00000018169	TRPT1	57	47.945	Callithrix_jacchus
ENSCING00000002405	-	85	44.654	ENSCAFG00000014591	TRPT1	65	44.172	Canis_familiaris
ENSCING00000002405	-	77	47.222	ENSCAFG00020014101	TRPT1	58	47.222	Canis_lupus_dingo
ENSCING00000002405	-	85	42.767	ENSCHIG00000021308	TRPT1	57	45.833	Capra_hircus
ENSCING00000002405	-	77	43.750	ENSTSYG00000026766	TRPT1	72	43.750	Carlito_syrichta
ENSCING00000002405	-	85	44.025	ENSCAPG00000016934	TRPT1	66	44.025	Cavia_aperea
ENSCING00000002405	-	85	44.025	ENSCPOG00000002923	TRPT1	63	44.025	Cavia_porcellus
ENSCING00000002405	-	77	46.528	ENSCCAG00000025683	TRPT1	72	46.528	Cebus_capucinus
ENSCING00000002405	-	77	45.205	ENSCATG00000031563	TRPT1	57	45.205	Cercocebus_atys
ENSCING00000002405	-	85	43.125	ENSCLAG00000016380	TRPT1	63	43.125	Chinchilla_lanigera
ENSCING00000002405	-	77	45.517	ENSCSAG00000006952	TRPT1	57	45.517	Chlorocebus_sabaeus
ENSCING00000002405	-	77	47.183	ENSCING00000024241	-	57	47.183	Ciona_intestinalis
ENSCING00000002405	-	78	46.154	ENSCSAVG00000003949	-	64	46.154	Ciona_savignyi
ENSCING00000002405	-	97	63.128	ENSCSAVG00000011071	-	56	63.128	Ciona_savignyi
ENSCING00000002405	-	77	45.890	ENSCANG00000042980	TRPT1	57	45.890	Colobus_angolensis_palliatus
ENSCING00000002405	-	76	47.518	ENSCGRG00001008474	Trpt1	56	47.518	Cricetulus_griseus_chok1gshd
ENSCING00000002405	-	76	47.518	ENSCGRG00000009793	Trpt1	56	47.518	Cricetulus_griseus_crigri
ENSCING00000002405	-	74	48.227	ENSCSEG00000005840	trpt1	60	48.227	Cynoglossus_semilaevis
ENSCING00000002405	-	76	44.444	ENSCVAG00000006318	trpt1	66	44.444	Cyprinodon_variegatus
ENSCING00000002405	-	77	46.528	ENSDARG00000037628	trpt1	64	46.528	Danio_rerio
ENSCING00000002405	-	85	36.250	ENSDNOG00000044923	TRPT1	56	36.250	Dasypus_novemcinctus
ENSCING00000002405	-	83	44.516	ENSDORG00000001624	Trpt1	63	44.516	Dipodomys_ordii
ENSCING00000002405	-	83	33.544	FBgn0053057	CG33057	73	33.544	Drosophila_melanogaster
ENSCING00000002405	-	76	49.645	ENSEBUG00000012569	-	75	49.645	Eptatretus_burgeri
ENSCING00000002405	-	77	47.917	ENSEASG00005019983	TRPT1	57	47.917	Equus_asinus_asinus
ENSCING00000002405	-	77	48.611	ENSECAG00000009917	TRPT1	71	42.742	Equus_caballus
ENSCING00000002405	-	77	46.528	ENSEEUG00000012739	TRPT1	57	46.528	Erinaceus_europaeus
ENSCING00000002405	-	76	47.917	ENSELUG00000007385	trpt1	62	47.917	Esox_lucius
ENSCING00000002405	-	77	45.833	ENSFCAG00000024621	TRPT1	70	45.833	Felis_catus
ENSCING00000002405	-	85	43.396	ENSFDAG00000002738	TRPT1	63	43.396	Fukomys_damarensis
ENSCING00000002405	-	76	45.833	ENSFHEG00000002434	trpt1	63	45.833	Fundulus_heteroclitus
ENSCING00000002405	-	76	39.161	ENSGMOG00000008716	trpt1	69	39.161	Gadus_morhua
ENSCING00000002405	-	76	46.528	ENSGAFG00000016762	trpt1	63	46.528	Gambusia_affinis
ENSCING00000002405	-	77	41.781	ENSGACG00000016927	trpt1	79	41.781	Gasterosteus_aculeatus
ENSCING00000002405	-	77	45.833	ENSGGOG00000012163	TRPT1	57	45.833	Gorilla_gorilla
ENSCING00000002405	-	83	43.590	ENSHBUG00000012772	trpt1	62	45.833	Haplochromis_burtoni
ENSCING00000002405	-	83	42.949	ENSHGLG00000013748	TRPT1	62	42.949	Heterocephalus_glaber_female
ENSCING00000002405	-	83	42.949	ENSHGLG00100013048	TRPT1	62	42.949	Heterocephalus_glaber_male
ENSCING00000002405	-	83	40.506	ENSHCOG00000000218	trpt1	62	41.096	Hippocampus_comes
ENSCING00000002405	-	77	46.207	ENSIPUG00000002573	trpt1	62	46.207	Ictalurus_punctatus
ENSCING00000002405	-	88	42.424	ENSSTOG00000014285	TRPT1	65	42.424	Ictidomys_tridecemlineatus
ENSCING00000002405	-	77	48.276	ENSJJAG00000010855	Trpt1	58	48.276	Jaculus_jaculus
ENSCING00000002405	-	74	46.809	ENSKMAG00000004214	trpt1	62	46.154	Kryptolebias_marmoratus
ENSCING00000002405	-	77	44.521	ENSLBEG00000005640	trpt1	63	44.521	Labrus_bergylta
ENSCING00000002405	-	77	48.611	ENSLACG00000016922	TRPT1	59	48.611	Latimeria_chalumnae
ENSCING00000002405	-	82	41.830	ENSLOCG00000001345	trpt1	62	41.830	Lepisosteus_oculatus
ENSCING00000002405	-	77	46.528	ENSLAFG00000009075	TRPT1	57	46.528	Loxodonta_africana
ENSCING00000002405	-	77	45.205	ENSMFAG00000036828	TRPT1	57	45.205	Macaca_fascicularis
ENSCING00000002405	-	77	45.833	ENSMMUG00000012940	TRPT1	57	45.833	Macaca_mulatta
ENSCING00000002405	-	77	45.205	ENSMNEG00000033348	TRPT1	57	45.205	Macaca_nemestrina
ENSCING00000002405	-	77	45.205	ENSMLEG00000031438	TRPT1	57	45.205	Mandrillus_leucophaeus
ENSCING00000002405	-	77	44.521	ENSMAMG00000021617	trpt1	62	45.139	Mastacembelus_armatus
ENSCING00000002405	-	83	43.590	ENSMZEG00005004773	trpt1	62	45.833	Maylandia_zebra
ENSCING00000002405	-	76	48.592	ENSMAUG00000014107	Trpt1	68	48.592	Mesocricetus_auratus
ENSCING00000002405	-	77	45.833	ENSMICG00000016950	TRPT1	57	45.833	Microcebus_murinus
ENSCING00000002405	-	77	48.611	ENSMOCG00000021342	Trpt1	57	48.611	Microtus_ochrogaster
ENSCING00000002405	-	76	43.056	ENSMMOG00000002896	trpt1	62	42.466	Mola_mola
ENSCING00000002405	-	76	42.958	ENSMODG00000010226	TRPT1	64	42.958	Monodelphis_domestica
ENSCING00000002405	-	76	45.833	ENSMALG00000012208	trpt1	58	45.205	Monopterus_albus
ENSCING00000002405	-	76	46.809	MGP_CAROLIEiJ_G0022627	Trpt1	56	46.809	Mus_caroli
ENSCING00000002405	-	76	46.809	ENSMUSG00000047656	Trpt1	56	46.809	Mus_musculus
ENSCING00000002405	-	83	44.872	MGP_PahariEiJ_G0014121	Trpt1	62	44.872	Mus_pahari
ENSCING00000002405	-	76	46.809	MGP_SPRETEiJ_G0023537	Trpt1	56	46.809	Mus_spretus
ENSCING00000002405	-	77	48.611	ENSMPUG00000013272	TRPT1	52	48.611	Mustela_putorius_furo
ENSCING00000002405	-	77	47.917	ENSMLUG00000024858	TRPT1	57	47.917	Myotis_lucifugus
ENSCING00000002405	-	88	43.293	ENSNGAG00000007665	Trpt1	79	43.293	Nannospalax_galili
ENSCING00000002405	-	83	39.766	ENSNBRG00000001528	trpt1	64	41.509	Neolamprologus_brichardi
ENSCING00000002405	-	77	36.913	ENSNLEG00000033525	-	70	34.722	Nomascus_leucogenys
ENSCING00000002405	-	85	40.506	ENSMEUG00000000943	TRPT1	62	40.506	Notamacropus_eugenii
ENSCING00000002405	-	85	46.250	ENSOPRG00000015917	TRPT1	64	46.250	Ochotona_princeps
ENSCING00000002405	-	89	41.212	ENSODEG00000015724	TRPT1	66	41.212	Octodon_degus
ENSCING00000002405	-	83	42.949	ENSONIG00000005333	trpt1	62	45.139	Oreochromis_niloticus
ENSCING00000002405	-	74	43.885	ENSOANG00000010375	TRPT1	59	44.444	Ornithorhynchus_anatinus
ENSCING00000002405	-	85	42.767	ENSOCUG00000022244	TRPT1	63	42.767	Oryctolagus_cuniculus
ENSCING00000002405	-	74	43.972	ENSORLG00000025159	trpt1	63	43.972	Oryzias_latipes
ENSCING00000002405	-	74	43.262	ENSORLG00020018944	trpt1	62	43.262	Oryzias_latipes_hni
ENSCING00000002405	-	74	43.972	ENSORLG00015017108	trpt1	62	43.972	Oryzias_latipes_hsok
ENSCING00000002405	-	74	45.390	ENSOMEG00000018645	trpt1	62	45.390	Oryzias_melastigma
ENSCING00000002405	-	77	47.222	ENSOGAG00000007134	TRPT1	57	47.222	Otolemur_garnettii
ENSCING00000002405	-	77	45.833	ENSOARG00000004961	TRPT1	56	45.833	Ovis_aries
ENSCING00000002405	-	77	45.833	ENSPPAG00000027600	TRPT1	70	45.833	Pan_paniscus
ENSCING00000002405	-	77	46.528	ENSPPRG00000022870	TRPT1	70	46.528	Panthera_pardus
ENSCING00000002405	-	77	46.528	ENSPTIG00000018872	TRPT1	70	46.528	Panthera_tigris_altaica
ENSCING00000002405	-	77	45.833	ENSPTRG00000003822	TRPT1	70	45.833	Pan_troglodytes
ENSCING00000002405	-	77	44.521	ENSPANG00000011001	TRPT1	57	44.521	Papio_anubis
ENSCING00000002405	-	77	40.690	ENSPKIG00000008323	trpt1	62	40.690	Paramormyrops_kingsleyae
ENSCING00000002405	-	84	40.385	ENSPSIG00000009910	TRPT1	65	40.385	Pelodiscus_sinensis
ENSCING00000002405	-	76	44.828	ENSPMGG00000005037	trpt1	63	44.828	Periophthalmus_magnuspinnatus
ENSCING00000002405	-	77	45.139	ENSPEMG00000013720	Trpt1	57	45.139	Peromyscus_maniculatus_bairdii
ENSCING00000002405	-	77	45.578	ENSPMAG00000001449	trpt1	69	45.578	Petromyzon_marinus
ENSCING00000002405	-	85	40.506	ENSPCIG00000008060	TRPT1	64	40.506	Phascolarctos_cinereus
ENSCING00000002405	-	76	44.444	ENSPFOG00000009475	trpt1	63	44.444	Poecilia_formosa
ENSCING00000002405	-	50	36.957	ENSPLAG00000023925	-	62	36.957	Poecilia_latipinna
ENSCING00000002405	-	76	44.444	ENSPMEG00000003682	trpt1	63	44.444	Poecilia_mexicana
ENSCING00000002405	-	76	45.139	ENSPREG00000015408	trpt1	63	45.139	Poecilia_reticulata
ENSCING00000002405	-	77	46.528	ENSPPYG00000003116	TRPT1	57	46.528	Pongo_abelii
ENSCING00000002405	-	76	47.518	ENSPCAG00000000762	TRPT1	56	47.518	Procavia_capensis
ENSCING00000002405	-	77	45.139	ENSPCOG00000010370	TRPT1	57	45.139	Propithecus_coquereli
ENSCING00000002405	-	83	39.766	ENSPNYG00000014805	trpt1	64	41.509	Pundamilia_nyererei
ENSCING00000002405	-	78	43.836	ENSPNAG00000008548	trpt1	62	45.070	Pygocentrus_nattereri
ENSCING00000002405	-	76	46.809	ENSRNOG00000023023	Trpt1	56	46.809	Rattus_norvegicus
ENSCING00000002405	-	77	45.833	ENSRBIG00000040432	TRPT1	57	45.833	Rhinopithecus_bieti
ENSCING00000002405	-	77	45.833	ENSRROG00000044905	TRPT1	57	45.833	Rhinopithecus_roxellana
ENSCING00000002405	-	68	37.879	YOL102C	TPT1	57	37.879	Saccharomyces_cerevisiae
ENSCING00000002405	-	77	45.833	ENSSBOG00000021466	TRPT1	57	45.833	Saimiri_boliviensis_boliviensis
ENSCING00000002405	-	76	40.972	ENSSFOG00015005844	trpt1	63	40.972	Scleropages_formosus
ENSCING00000002405	-	77	46.575	ENSSMAG00000017744	trpt1	63	46.575	Scophthalmus_maximus
ENSCING00000002405	-	77	43.151	ENSSDUG00000017106	trpt1	64	43.151	Seriola_dumerili
ENSCING00000002405	-	93	37.500	ENSSLDG00000015957	trpt1	62	43.448	Seriola_lalandi_dorsalis
ENSCING00000002405	-	77	44.521	ENSSPAG00000007557	trpt1	59	44.521	Stegastes_partitus
ENSCING00000002405	-	77	46.528	ENSSSCG00000013040	TRPT1	55	46.528	Sus_scrofa
ENSCING00000002405	-	74	43.972	ENSTRUG00000023723	trpt1	60	43.972	Takifugu_rubripes
ENSCING00000002405	-	77	41.096	ENSTNIG00000003381	trpt1	62	41.096	Tetraodon_nigroviridis
ENSCING00000002405	-	77	43.750	ENSTBEG00000006023	TRPT1	56	43.750	Tupaia_belangeri
ENSCING00000002405	-	77	45.833	ENSTTRG00000010252	TRPT1	57	45.833	Tursiops_truncatus
ENSCING00000002405	-	77	47.917	ENSUAMG00000015208	TRPT1	57	47.917	Ursus_americanus
ENSCING00000002405	-	77	47.917	ENSUMAG00000001410	TRPT1	57	47.917	Ursus_maritimus
ENSCING00000002405	-	77	47.917	ENSVVUG00000029774	TRPT1	59	47.917	Vulpes_vulpes
ENSCING00000002405	-	77	43.357	ENSXETG00000007196	trpt1	62	43.357	Xenopus_tropicalis
ENSCING00000002405	-	77	44.828	ENSXCOG00000001614	trpt1	64	44.828	Xiphophorus_couchianus
ENSCING00000002405	-	76	44.444	ENSXMAG00000003142	trpt1	64	44.444	Xiphophorus_maculatus