EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002435 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 531 bases
Position: chr1:2645064-2645594
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000025120	PTH2	PF01981.16	2.6e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000025366	-	501	-	ENSCINP00000025120	166 (aa)	-	F6RKZ8

Gene Model

Click here to download ENSCING00000002435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002435's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002435	-	96	61.111	ENSG00000141378	PTRH2	90	61.111	Homo_sapiens
ENSCING00000002435	-	96	56.875	ENSAPOG00000008379	ptrh2	91	56.875	Acanthochromis_polyacanthus
ENSCING00000002435	-	96	56.875	ENSAPOG00000008893	-	94	56.875	Acanthochromis_polyacanthus
ENSCING00000002435	-	95	58.750	ENSAMEG00000011479	PTRH2	83	58.750	Ailuropoda_melanoleuca
ENSCING00000002435	-	88	57.823	ENSACIG00000004561	ptrh2	99	56.098	Amphilophus_citrinellus
ENSCING00000002435	-	96	56.250	ENSAOCG00000002043	ptrh2	91	56.250	Amphiprion_ocellaris
ENSCING00000002435	-	95	56.790	ENSAPEG00000014719	ptrh2	84	56.790	Amphiprion_percula
ENSCING00000002435	-	96	56.875	ENSATEG00000004102	ptrh2	90	56.875	Anabas_testudineus
ENSCING00000002435	-	97	55.758	ENSACAG00000012801	PTRH2	90	57.576	Anolis_carolinensis
ENSCING00000002435	-	95	57.764	ENSANAG00000021542	PTRH2	89	57.764	Aotus_nancymaae
ENSCING00000002435	-	70	64.103	ENSACLG00000025860	ptrh2	96	50.000	Astatotilapia_calliptera
ENSCING00000002435	-	96	58.125	ENSAMXG00000025556	ptrh2	95	58.125	Astyanax_mexicanus
ENSCING00000002435	-	99	57.059	ENSBTAG00000016710	PTRH2	93	57.059	Bos_taurus
ENSCING00000002435	-	95	59.006	ENSCJAG00000001503	PTRH2	89	59.006	Callithrix_jacchus
ENSCING00000002435	-	95	58.125	ENSCAFG00000017662	PTRH2	89	58.125	Canis_familiaris
ENSCING00000002435	-	95	58.125	ENSCAFG00020026497	PTRH2	89	58.125	Canis_lupus_dingo
ENSCING00000002435	-	99	57.647	ENSCHIG00000010059	PTRH2	93	57.647	Capra_hircus
ENSCING00000002435	-	95	57.500	ENSTSYG00000033941	PTRH2	89	57.500	Carlito_syrichta
ENSCING00000002435	-	94	59.627	ENSCAPG00000004268	PTRH2	88	59.627	Cavia_aperea
ENSCING00000002435	-	94	59.627	ENSCPOG00000032354	PTRH2	88	59.627	Cavia_porcellus
ENSCING00000002435	-	95	59.006	ENSCCAG00000018678	PTRH2	89	59.006	Cebus_capucinus
ENSCING00000002435	-	96	60.494	ENSCATG00000043363	PTRH2	89	60.494	Cercocebus_atys
ENSCING00000002435	-	95	60.123	ENSCLAG00000011379	PTRH2	89	60.123	Chinchilla_lanigera
ENSCING00000002435	-	96	61.111	ENSCSAG00000000552	PTRH2	90	61.111	Chlorocebus_sabaeus
ENSCING00000002435	-	95	57.669	ENSCHOG00000004503	PTRH2	89	57.669	Choloepus_hoffmanni
ENSCING00000002435	-	96	55.215	ENSCPBG00000006143	PTRH2	96	55.215	Chrysemys_picta_bellii
ENSCING00000002435	-	96	61.111	ENSCANG00000037379	PTRH2	89	61.111	Colobus_angolensis_palliatus
ENSCING00000002435	-	95	56.790	ENSCGRG00001011782	Ptrh2	90	56.790	Cricetulus_griseus_chok1gshd
ENSCING00000002435	-	95	56.790	ENSCGRG00000011007	-	90	56.790	Cricetulus_griseus_crigri
ENSCING00000002435	-	95	42.169	ENSCGRG00000006519	-	88	42.169	Cricetulus_griseus_crigri
ENSCING00000002435	-	96	54.878	ENSCSEG00000011617	ptrh2	88	54.878	Cynoglossus_semilaevis
ENSCING00000002435	-	74	65.625	ENSCVAG00000016871	ptrh2	89	56.098	Cyprinodon_variegatus
ENSCING00000002435	-	96	56.442	ENSDARG00000077339	ptrh2	93	56.442	Danio_rerio
ENSCING00000002435	-	95	57.669	ENSDNOG00000031122	PTRH2	89	57.669	Dasypus_novemcinctus
ENSCING00000002435	-	95	57.143	ENSDORG00000027376	Ptrh2	89	57.143	Dipodomys_ordii
ENSCING00000002435	-	70	52.586	FBgn0026566	CG1307	76	48.592	Drosophila_melanogaster
ENSCING00000002435	-	71	45.455	FBgn0038107	CG17327	87	45.455	Drosophila_melanogaster
ENSCING00000002435	-	96	50.595	ENSEBUG00000003900	ptrh2	93	50.595	Eptatretus_burgeri
ENSCING00000002435	-	95	58.750	ENSEASG00005002310	PTRH2	89	58.750	Equus_asinus_asinus
ENSCING00000002435	-	95	58.750	ENSECAG00000003621	PTRH2	89	58.750	Equus_caballus
ENSCING00000002435	-	96	56.364	ENSELUG00000023013	ptrh2	80	56.364	Esox_lucius
ENSCING00000002435	-	93	60.256	ENSFCAG00000018969	PTRH2	87	60.256	Felis_catus
ENSCING00000002435	-	89	56.291	ENSFALG00000015110	PTRH2	90	56.173	Ficedula_albicollis
ENSCING00000002435	-	95	59.119	ENSFDAG00000011721	PTRH2	89	59.119	Fukomys_damarensis
ENSCING00000002435	-	96	55.488	ENSFHEG00000015394	ptrh2	86	55.488	Fundulus_heteroclitus
ENSCING00000002435	-	96	57.143	ENSGMOG00000020589	ptrh2	90	57.143	Gadus_morhua
ENSCING00000002435	-	96	53.750	ENSGALG00000005150	PTRH2	94	53.750	Gallus_gallus
ENSCING00000002435	-	96	56.098	ENSGAFG00000015503	ptrh2	90	56.098	Gambusia_affinis
ENSCING00000002435	-	74	47.244	ENSGAGG00000024006	PTRH2	80	47.244	Gopherus_agassizii
ENSCING00000002435	-	96	61.111	ENSGGOG00000007957	PTRH2	89	61.111	Gorilla_gorilla
ENSCING00000002435	-	70	64.957	ENSHBUG00000017727	ptrh2	99	50.595	Haplochromis_burtoni
ENSCING00000002435	-	95	58.385	ENSHGLG00000007335	PTRH2	89	58.385	Heterocephalus_glaber_female
ENSCING00000002435	-	95	58.385	ENSHGLG00100011494	PTRH2	89	58.385	Heterocephalus_glaber_male
ENSCING00000002435	-	96	51.829	ENSHCOG00000012325	ptrh2	92	51.829	Hippocampus_comes
ENSCING00000002435	-	96	56.364	ENSIPUG00000019124	ptrh2	93	56.364	Ictalurus_punctatus
ENSCING00000002435	-	97	57.229	ENSSTOG00000028844	PTRH2	91	57.229	Ictidomys_tridecemlineatus
ENSCING00000002435	-	95	55.556	ENSJJAG00000019588	-	89	55.556	Jaculus_jaculus
ENSCING00000002435	-	70	58.974	ENSJJAG00000015451	-	75	58.974	Jaculus_jaculus
ENSCING00000002435	-	96	56.250	ENSKMAG00000013276	ptrh2	81	56.250	Kryptolebias_marmoratus
ENSCING00000002435	-	96	55.625	ENSLBEG00000004103	ptrh2	85	55.625	Labrus_bergylta
ENSCING00000002435	-	99	54.706	ENSLACG00000010258	PTRH2	93	54.706	Latimeria_chalumnae
ENSCING00000002435	-	96	59.509	ENSLOCG00000017426	ptrh2	93	59.509	Lepisosteus_oculatus
ENSCING00000002435	-	95	59.375	ENSLAFG00000031641	PTRH2	89	59.375	Loxodonta_africana
ENSCING00000002435	-	96	59.877	ENSMFAG00000036307	PTRH2	89	59.877	Macaca_fascicularis
ENSCING00000002435	-	96	60.494	ENSMMUG00000001572	PTRH2	90	60.494	Macaca_mulatta
ENSCING00000002435	-	96	60.494	ENSMNEG00000037063	PTRH2	89	60.494	Macaca_nemestrina
ENSCING00000002435	-	96	60.494	ENSMLEG00000028260	PTRH2	89	60.494	Mandrillus_leucophaeus
ENSCING00000002435	-	96	55.000	ENSMAMG00000005245	ptrh2	92	55.000	Mastacembelus_armatus
ENSCING00000002435	-	70	64.103	ENSMZEG00005023327	ptrh2	97	50.000	Maylandia_zebra
ENSCING00000002435	-	96	54.658	ENSMGAG00000015485	PTRH2	90	54.658	Meleagris_gallopavo
ENSCING00000002435	-	95	58.025	ENSMAUG00000022169	Ptrh2	90	58.025	Mesocricetus_auratus
ENSCING00000002435	-	95	55.422	ENSMICG00000032675	-	89	55.422	Microcebus_murinus
ENSCING00000002435	-	93	49.068	ENSMICG00000043977	-	90	49.068	Microcebus_murinus
ENSCING00000002435	-	95	56.970	ENSMOCG00000018927	Ptrh2	90	56.970	Microtus_ochrogaster
ENSCING00000002435	-	96	55.625	ENSMMOG00000005796	ptrh2	92	55.625	Mola_mola
ENSCING00000002435	-	95	57.059	ENSMODG00000024517	PTRH2	90	57.059	Monodelphis_domestica
ENSCING00000002435	-	96	53.750	ENSMALG00000001875	ptrh2	64	53.750	Monopterus_albus
ENSCING00000002435	-	95	56.173	MGP_CAROLIEiJ_G0016918	Ptrh2	90	56.173	Mus_caroli
ENSCING00000002435	-	95	56.173	ENSMUSG00000072582	Ptrh2	90	56.173	Mus_musculus
ENSCING00000002435	-	95	55.556	MGP_PahariEiJ_G0018048	Ptrh2	90	55.556	Mus_pahari
ENSCING00000002435	-	95	56.173	MGP_SPRETEiJ_G0017764	Ptrh2	90	56.173	Mus_spretus
ENSCING00000002435	-	95	58.125	ENSMPUG00000019628	PTRH2	89	58.125	Mustela_putorius_furo
ENSCING00000002435	-	93	59.615	ENSMLUG00000025120	PTRH2	87	59.615	Myotis_lucifugus
ENSCING00000002435	-	95	57.669	ENSNGAG00000011147	Ptrh2	89	57.669	Nannospalax_galili
ENSCING00000002435	-	70	64.957	ENSNBRG00000017781	ptrh2	92	50.595	Neolamprologus_brichardi
ENSCING00000002435	-	96	59.877	ENSNLEG00000000792	PTRH2	89	59.877	Nomascus_leucogenys
ENSCING00000002435	-	95	57.764	ENSOPRG00000019186	PTRH2	89	57.764	Ochotona_princeps
ENSCING00000002435	-	95	57.055	ENSODEG00000020061	PTRH2	89	58.282	Octodon_degus
ENSCING00000002435	-	81	57.554	ENSONIG00000020574	ptrh2	98	51.479	Oreochromis_niloticus
ENSCING00000002435	-	95	56.442	ENSOANG00000008523	PTRH2	89	56.442	Ornithorhynchus_anatinus
ENSCING00000002435	-	95	54.375	ENSOCUG00000023345	PTRH2	89	55.215	Oryctolagus_cuniculus
ENSCING00000002435	-	70	68.376	ENSORLG00000012183	ptrh2	94	55.901	Oryzias_latipes
ENSCING00000002435	-	70	69.231	ENSORLG00020015390	ptrh2	75	56.522	Oryzias_latipes_hni
ENSCING00000002435	-	70	69.231	ENSORLG00015022173	ptrh2	75	57.143	Oryzias_latipes_hsok
ENSCING00000002435	-	70	68.376	ENSOMEG00000011056	ptrh2	88	55.758	Oryzias_melastigma
ENSCING00000002435	-	93	54.268	ENSOGAG00000027962	-	90	54.268	Otolemur_garnettii
ENSCING00000002435	-	95	58.125	ENSOGAG00000026779	-	89	58.125	Otolemur_garnettii
ENSCING00000002435	-	99	57.647	ENSOARG00000003891	PTRH2	93	57.647	Ovis_aries
ENSCING00000002435	-	96	61.111	ENSPPAG00000032040	PTRH2	89	61.111	Pan_paniscus
ENSCING00000002435	-	95	58.750	ENSPPRG00000018489	PTRH2	89	58.750	Panthera_pardus
ENSCING00000002435	-	95	58.750	ENSPTIG00000004923	PTRH2	89	58.750	Panthera_tigris_altaica
ENSCING00000002435	-	96	61.111	ENSPTRG00000009474	PTRH2	89	61.111	Pan_troglodytes
ENSCING00000002435	-	96	60.494	ENSPANG00000022269	PTRH2	89	60.494	Papio_anubis
ENSCING00000002435	-	96	54.268	ENSPKIG00000019982	ptrh2	97	54.268	Paramormyrops_kingsleyae
ENSCING00000002435	-	98	55.952	ENSPSIG00000008890	PTRH2	92	55.952	Pelodiscus_sinensis
ENSCING00000002435	-	96	57.500	ENSPMGG00000014486	ptrh2	92	57.500	Periophthalmus_magnuspinnatus
ENSCING00000002435	-	95	55.556	ENSPEMG00000024186	Ptrh2	90	55.556	Peromyscus_maniculatus_bairdii
ENSCING00000002435	-	95	56.471	ENSPCIG00000021876	PTRH2	90	56.471	Phascolarctos_cinereus
ENSCING00000002435	-	92	58.824	ENSPFOG00000019981	ptrh2	86	58.824	Poecilia_formosa
ENSCING00000002435	-	92	58.824	ENSPLAG00000017895	ptrh2	86	58.824	Poecilia_latipinna
ENSCING00000002435	-	92	58.824	ENSPMEG00000013227	ptrh2	86	58.824	Poecilia_mexicana
ENSCING00000002435	-	92	58.824	ENSPREG00000009062	ptrh2	86	58.824	Poecilia_reticulata
ENSCING00000002435	-	96	60.494	ENSPPYG00000008810	PTRH2	90	60.494	Pongo_abelii
ENSCING00000002435	-	95	58.125	ENSPCAG00000011420	PTRH2	89	58.125	Procavia_capensis
ENSCING00000002435	-	95	56.875	ENSPCOG00000013419	PTRH2	89	56.875	Propithecus_coquereli
ENSCING00000002435	-	99	56.886	ENSPVAG00000001542	PTRH2	93	56.886	Pteropus_vampyrus
ENSCING00000002435	-	70	64.957	ENSPNYG00000021938	ptrh2	97	50.595	Pundamilia_nyererei
ENSCING00000002435	-	96	56.173	ENSPNAG00000011617	ptrh2	90	56.173	Pygocentrus_nattereri
ENSCING00000002435	-	95	56.173	ENSRNOG00000004288	Ptrh2	90	56.173	Rattus_norvegicus
ENSCING00000002435	-	96	61.111	ENSRBIG00000033946	PTRH2	89	61.111	Rhinopithecus_bieti
ENSCING00000002435	-	96	61.111	ENSRROG00000038107	PTRH2	89	61.111	Rhinopithecus_roxellana
ENSCING00000002435	-	72	46.825	YBL057C	-	72	45.638	Saccharomyces_cerevisiae
ENSCING00000002435	-	95	58.896	ENSSBOG00000021203	PTRH2	89	58.896	Saimiri_boliviensis_boliviensis
ENSCING00000002435	-	96	53.488	ENSSHAG00000016608	PTRH2	90	55.357	Sarcophilus_harrisii
ENSCING00000002435	-	96	54.268	ENSSFOG00015014530	ptrh2	91	54.268	Scleropages_formosus
ENSCING00000002435	-	88	55.629	ENSSMAG00000000686	ptrh2	68	53.659	Scophthalmus_maximus
ENSCING00000002435	-	96	55.000	ENSSDUG00000018478	ptrh2	83	55.152	Seriola_dumerili
ENSCING00000002435	-	96	55.152	ENSSLDG00000020791	ptrh2	83	55.152	Seriola_lalandi_dorsalis
ENSCING00000002435	-	96	57.317	ENSSPUG00000016349	PTRH2	91	57.317	Sphenodon_punctatus
ENSCING00000002435	-	96	55.625	ENSSPAG00000006060	ptrh2	90	55.625	Stegastes_partitus
ENSCING00000002435	-	93	58.333	ENSSSCG00000017667	PTRH2	87	58.333	Sus_scrofa
ENSCING00000002435	-	96	55.152	ENSTGUG00000007610	PTRH2	96	55.152	Taeniopygia_guttata
ENSCING00000002435	-	96	57.500	ENSTRUG00000008299	ptrh2	86	57.500	Takifugu_rubripes
ENSCING00000002435	-	96	55.000	ENSTNIG00000001658	-	92	55.000	Tetraodon_nigroviridis
ENSCING00000002435	-	96	38.750	ENSTNIG00000003805	-	87	38.750	Tetraodon_nigroviridis
ENSCING00000002435	-	78	53.077	ENSTNIG00000005343	-	92	53.077	Tetraodon_nigroviridis
ENSCING00000002435	-	96	55.000	ENSTNIG00000000826	PTRH2	92	55.000	Tetraodon_nigroviridis
ENSCING00000002435	-	99	54.491	ENSTTRG00000017211	PTRH2	93	54.491	Tursiops_truncatus
ENSCING00000002435	-	95	58.750	ENSUAMG00000009684	-	84	58.750	Ursus_americanus
ENSCING00000002435	-	95	58.750	ENSUAMG00000009688	-	91	58.750	Ursus_americanus
ENSCING00000002435	-	95	58.750	ENSUMAG00000022710	PTRH2	89	58.750	Ursus_maritimus
ENSCING00000002435	-	95	58.282	ENSVPAG00000009365	PTRH2	89	58.282	Vicugna_pacos
ENSCING00000002435	-	95	58.750	ENSVVUG00000018120	PTRH2	89	58.750	Vulpes_vulpes
ENSCING00000002435	-	99	57.988	ENSXETG00000010737	ptrh2	97	57.988	Xenopus_tropicalis
ENSCING00000002435	-	96	55.488	ENSXCOG00000004873	ptrh2	84	55.488	Xiphophorus_couchianus
ENSCING00000002435	-	94	55.901	ENSXMAG00000020094	ptrh2	88	55.901	Xiphophorus_maculatus