EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002472 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3584 bases
Position: chrHT001104.1:39667-43250
Accession: 100185737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005045	Gcd10p	PF04189.13	2.7e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005045	-	1219	XM_004227482	ENSCINP00000005045	403 (aa)	XP_004227530	F7B480

Gene Model

Click here to download ENSCING00000002472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002472	-	96	34.071	ENSG00000089195	TRMT6	90	34.979	Homo_sapiens
ENSCING00000002472	-	95	37.772	ENSAPOG00000008036	trmt6	92	37.907	Acanthochromis_polyacanthus
ENSCING00000002472	-	96	33.850	ENSAMEG00000010635	TRMT6	90	34.764	Ailuropoda_melanoleuca
ENSCING00000002472	-	96	38.257	ENSACIG00000004608	trmt6	94	38.642	Amphilophus_citrinellus
ENSCING00000002472	-	96	37.713	ENSAOCG00000024322	trmt6	94	38.407	Amphiprion_ocellaris
ENSCING00000002472	-	96	35.714	ENSAPEG00000017334	trmt6	94	36.147	Amphiprion_percula
ENSCING00000002472	-	90	35.322	ENSATEG00000018498	trmt6	92	36.721	Anabas_testudineus
ENSCING00000002472	-	88	34.884	ENSAPLG00000007761	TRMT6	92	35.666	Anas_platyrhynchos
ENSCING00000002472	-	97	35.683	ENSACAG00000000575	TRMT6	91	36.484	Anolis_carolinensis
ENSCING00000002472	-	96	34.437	ENSANAG00000021260	TRMT6	90	35.332	Aotus_nancymaae
ENSCING00000002472	-	96	34.967	ENSACLG00000026034	trmt6	94	35.421	Astatotilapia_calliptera
ENSCING00000002472	-	93	35.198	ENSAMXG00000017116	trmt6	90	36.036	Astyanax_mexicanus
ENSCING00000002472	-	93	33.937	ENSBTAG00000001314	TRMT6	88	35.088	Bos_taurus
ENSCING00000002472	-	96	34.375	ENSCJAG00000021296	TRMT6	90	35.193	Callithrix_jacchus
ENSCING00000002472	-	96	33.628	ENSCAFG00000005969	TRMT6	90	34.549	Canis_familiaris
ENSCING00000002472	-	96	33.628	ENSCAFG00020000777	TRMT6	90	33.906	Canis_lupus_dingo
ENSCING00000002472	-	93	33.937	ENSCHIG00000010338	TRMT6	88	35.526	Capra_hircus
ENSCING00000002472	-	93	33.562	ENSTSYG00000004286	TRMT6	88	34.513	Carlito_syrichta
ENSCING00000002472	-	76	35.135	ENSCAPG00000015467	TRMT6	86	36.031	Cavia_aperea
ENSCING00000002472	-	96	34.513	ENSCPOG00000013809	TRMT6	89	34.839	Cavia_porcellus
ENSCING00000002472	-	96	33.850	ENSCCAG00000026939	TRMT6	90	34.764	Cebus_capucinus
ENSCING00000002472	-	96	34.071	ENSCATG00000041111	TRMT6	90	34.979	Cercocebus_atys
ENSCING00000002472	-	93	33.790	ENSCLAG00000013978	TRMT6	87	35.698	Chinchilla_lanigera
ENSCING00000002472	-	96	34.292	ENSCSAG00000013461	TRMT6	90	35.193	Chlorocebus_sabaeus
ENSCING00000002472	-	93	34.240	ENSCPBG00000023406	TRMT6	90	35.242	Chrysemys_picta_bellii
ENSCING00000002472	-	98	62.500	ENSCSAVG00000001680	-	99	62.723	Ciona_savignyi
ENSCING00000002472	-	96	34.071	ENSCANG00000002381	TRMT6	90	34.979	Colobus_angolensis_palliatus
ENSCING00000002472	-	96	34.744	ENSCGRG00001003385	Trmt6	90	35.129	Cricetulus_griseus_chok1gshd
ENSCING00000002472	-	96	34.744	ENSCGRG00000006540	Trmt6	90	35.129	Cricetulus_griseus_crigri
ENSCING00000002472	-	97	38.018	ENSCSEG00000002228	trmt6	90	37.788	Cynoglossus_semilaevis
ENSCING00000002472	-	93	33.566	ENSCVAG00000000341	trmt6	91	34.537	Cyprinodon_variegatus
ENSCING00000002472	-	95	35.461	ENSDARG00000042344	trmt6	91	36.758	Danio_rerio
ENSCING00000002472	-	96	33.778	ENSDNOG00000012785	TRMT6	89	34.416	Dasypus_novemcinctus
ENSCING00000002472	-	96	34.375	ENSDORG00000006458	Trmt6	90	35.141	Dipodomys_ordii
ENSCING00000002472	-	77	31.250	FBgn0031832	CG9596	78	30.966	Drosophila_melanogaster
ENSCING00000002472	-	95	36.792	ENSEASG00005001411	TRMT6	92	37.358	Equus_asinus_asinus
ENSCING00000002472	-	95	33.925	ENSECAG00000023914	TRMT6	90	34.549	Equus_caballus
ENSCING00000002472	-	93	34.703	ENSEEUG00000006635	TRMT6	88	35.398	Erinaceus_europaeus
ENSCING00000002472	-	96	37.530	ENSELUG00000013378	trmt6	80	37.149	Esox_lucius
ENSCING00000002472	-	95	34.368	ENSFCAG00000003102	TRMT6	89	35.054	Felis_catus
ENSCING00000002472	-	88	35.545	ENSFALG00000013575	TRMT6	91	36.782	Ficedula_albicollis
ENSCING00000002472	-	96	33.705	ENSFDAG00000015117	TRMT6	90	34.989	Fukomys_damarensis
ENSCING00000002472	-	96	34.812	ENSFHEG00000019957	trmt6	95	35.054	Fundulus_heteroclitus
ENSCING00000002472	-	93	40.957	ENSGMOG00000011059	trmt6	89	41.710	Gadus_morhua
ENSCING00000002472	-	96	35.371	ENSGALG00000009169	TRMT6	90	35.683	Gallus_gallus
ENSCING00000002472	-	96	34.076	ENSGAFG00000008618	trmt6	95	34.773	Gambusia_affinis
ENSCING00000002472	-	96	37.442	ENSGACG00000012471	trmt6	93	37.838	Gasterosteus_aculeatus
ENSCING00000002472	-	93	34.467	ENSGAGG00000008464	TRMT6	93	34.014	Gopherus_agassizii
ENSCING00000002472	-	96	34.071	ENSGGOG00000008597	TRMT6	90	34.979	Gorilla_gorilla
ENSCING00000002472	-	96	35.635	ENSHBUG00000016631	trmt6	94	36.069	Haplochromis_burtoni
ENSCING00000002472	-	93	34.932	ENSHGLG00000015405	TRMT6	88	35.099	Heterocephalus_glaber_female
ENSCING00000002472	-	93	34.932	ENSHGLG00100004120	TRMT6	88	35.099	Heterocephalus_glaber_male
ENSCING00000002472	-	95	36.427	ENSHCOG00000000118	trmt6	90	36.712	Hippocampus_comes
ENSCING00000002472	-	95	35.849	ENSIPUG00000019365	trmt6	95	36.384	Ictalurus_punctatus
ENSCING00000002472	-	96	34.228	ENSSTOG00000006863	TRMT6	89	35.000	Ictidomys_tridecemlineatus
ENSCING00000002472	-	96	34.812	ENSJJAG00000007315	Trmt6	89	35.435	Jaculus_jaculus
ENSCING00000002472	-	96	35.570	ENSKMAG00000001295	trmt6	95	36.443	Kryptolebias_marmoratus
ENSCING00000002472	-	97	34.676	ENSLBEG00000025654	trmt6	91	34.452	Labrus_bergylta
ENSCING00000002472	-	93	36.674	ENSLACG00000016478	TRMT6	89	37.389	Latimeria_chalumnae
ENSCING00000002472	-	93	35.321	ENSLOCG00000016451	trmt6	89	36.323	Lepisosteus_oculatus
ENSCING00000002472	-	96	33.853	ENSLAFG00000032216	TRMT6	90	34.267	Loxodonta_africana
ENSCING00000002472	-	96	34.071	ENSMFAG00000044360	TRMT6	90	34.979	Macaca_fascicularis
ENSCING00000002472	-	96	34.071	ENSMMUG00000013728	TRMT6	90	34.979	Macaca_mulatta
ENSCING00000002472	-	96	34.071	ENSMNEG00000041831	TRMT6	90	34.979	Macaca_nemestrina
ENSCING00000002472	-	96	34.071	ENSMLEG00000040762	TRMT6	90	34.979	Mandrillus_leucophaeus
ENSCING00000002472	-	96	36.364	ENSMAMG00000012101	trmt6	94	37.327	Mastacembelus_armatus
ENSCING00000002472	-	96	35.412	ENSMZEG00005010771	trmt6	94	35.853	Maylandia_zebra
ENSCING00000002472	-	93	34.157	ENSMGAG00000007678	TRMT6	90	35.242	Meleagris_gallopavo
ENSCING00000002472	-	96	35.189	ENSMAUG00000008719	Trmt6	90	34.839	Mesocricetus_auratus
ENSCING00000002472	-	95	33.036	ENSMICG00000011626	TRMT6	90	34.125	Microcebus_murinus
ENSCING00000002472	-	93	35.698	ENSMOCG00000022320	Trmt6	88	36.283	Microtus_ochrogaster
ENSCING00000002472	-	99	36.842	ENSMMOG00000004412	trmt6	94	36.613	Mola_mola
ENSCING00000002472	-	95	32.222	ENSMODG00000003784	TRMT6	90	33.548	Monodelphis_domestica
ENSCING00000002472	-	93	37.783	ENSMALG00000018140	trmt6	89	38.293	Monopterus_albus
ENSCING00000002472	-	96	34.298	MGP_CAROLIEiJ_G0024344	Trmt6	90	34.914	Mus_caroli
ENSCING00000002472	-	96	34.152	ENSMUSG00000037376	Trmt6	90	34.773	Mus_musculus
ENSCING00000002472	-	96	34.298	MGP_PahariEiJ_G0025789	Trmt6	90	35.345	Mus_pahari
ENSCING00000002472	-	96	34.076	MGP_SPRETEiJ_G0025264	Trmt6	90	34.698	Mus_spretus
ENSCING00000002472	-	93	33.563	ENSMPUG00000006317	TRMT6	90	33.103	Mustela_putorius_furo
ENSCING00000002472	-	83	49.425	ENSMLUG00000006491	TRMT6	90	34.848	Myotis_lucifugus
ENSCING00000002472	-	93	34.018	ENSNGAG00000015251	Trmt6	87	34.812	Nannospalax_galili
ENSCING00000002472	-	96	36.516	ENSNBRG00000020261	trmt6	94	36.866	Neolamprologus_brichardi
ENSCING00000002472	-	96	34.513	ENSNLEG00000013957	TRMT6	90	34.979	Nomascus_leucogenys
ENSCING00000002472	-	92	32.500	ENSMEUG00000009179	TRMT6	99	32.500	Notamacropus_eugenii
ENSCING00000002472	-	86	44.037	ENSOPRG00000008564	TRMT6	89	34.211	Ochotona_princeps
ENSCING00000002472	-	96	34.375	ENSODEG00000005657	TRMT6	89	35.141	Octodon_degus
ENSCING00000002472	-	96	35.189	ENSONIG00000000968	trmt6	94	35.637	Oreochromis_niloticus
ENSCING00000002472	-	88	35.154	ENSOANG00000008403	-	92	35.253	Ornithorhynchus_anatinus
ENSCING00000002472	-	96	33.929	ENSOCUG00000014669	TRMT6	90	34.632	Oryctolagus_cuniculus
ENSCING00000002472	-	96	34.076	ENSORLG00000009862	trmt6	95	34.989	Oryzias_latipes
ENSCING00000002472	-	96	34.076	ENSORLG00020001466	trmt6	95	35.281	Oryzias_latipes_hni
ENSCING00000002472	-	96	34.222	ENSORLG00015015552	trmt6	95	35.345	Oryzias_latipes_hsok
ENSCING00000002472	-	93	35.765	ENSOMEG00000019874	trmt6	91	36.343	Oryzias_melastigma
ENSCING00000002472	-	95	32.366	ENSOGAG00000012950	TRMT6	89	34.773	Otolemur_garnettii
ENSCING00000002472	-	93	33.937	ENSOARG00000017993	TRMT6	88	35.088	Ovis_aries
ENSCING00000002472	-	96	33.775	ENSPPAG00000036809	TRMT6	90	34.904	Pan_paniscus
ENSCING00000002472	-	95	34.368	ENSPPRG00000000424	TRMT6	89	35.054	Panthera_pardus
ENSCING00000002472	-	95	34.368	ENSPTIG00000010629	TRMT6	89	35.054	Panthera_tigris_altaica
ENSCING00000002472	-	96	34.292	ENSPTRG00000013231	TRMT6	90	35.193	Pan_troglodytes
ENSCING00000002472	-	96	34.071	ENSPANG00000009284	TRMT6	90	34.979	Papio_anubis
ENSCING00000002472	-	98	36.343	ENSPKIG00000003441	trmt6	91	36.343	Paramormyrops_kingsleyae
ENSCING00000002472	-	93	34.240	ENSPSIG00000017048	TRMT6	90	35.730	Pelodiscus_sinensis
ENSCING00000002472	-	93	36.186	ENSPMGG00000021074	trmt6	95	36.486	Periophthalmus_magnuspinnatus
ENSCING00000002472	-	96	34.452	ENSPEMG00000023268	Trmt6	89	35.065	Peromyscus_maniculatus_bairdii
ENSCING00000002472	-	95	33.925	ENSPCIG00000001546	TRMT6	88	34.549	Phascolarctos_cinereus
ENSCING00000002472	-	96	33.188	ENSPFOG00000003037	trmt6	95	33.686	Poecilia_formosa
ENSCING00000002472	-	96	34.667	ENSPLAG00000005143	trmt6	95	34.707	Poecilia_latipinna
ENSCING00000002472	-	96	34.228	ENSPMEG00000014875	trmt6	95	34.707	Poecilia_mexicana
ENSCING00000002472	-	96	36.683	ENSPREG00000016227	trmt6	94	37.530	Poecilia_reticulata
ENSCING00000002472	-	96	33.850	ENSPPYG00000010691	TRMT6	90	34.764	Pongo_abelii
ENSCING00000002472	-	96	33.259	ENSPCAG00000012098	TRMT6	90	34.632	Procavia_capensis
ENSCING00000002472	-	95	33.036	ENSPCOG00000020723	TRMT6	90	34.989	Propithecus_coquereli
ENSCING00000002472	-	96	31.556	ENSPVAG00000007539	TRMT6	90	31.897	Pteropus_vampyrus
ENSCING00000002472	-	93	38.861	ENSPNYG00000000918	trmt6	91	39.141	Pundamilia_nyererei
ENSCING00000002472	-	95	33.945	ENSPNAG00000019279	trmt6	91	35.333	Pygocentrus_nattereri
ENSCING00000002472	-	96	34.899	ENSRNOG00000021270	Trmt6	90	35.498	Rattus_norvegicus
ENSCING00000002472	-	96	33.775	ENSRBIG00000031132	TRMT6	90	34.979	Rhinopithecus_bieti
ENSCING00000002472	-	96	34.071	ENSRROG00000045329	TRMT6	90	34.979	Rhinopithecus_roxellana
ENSCING00000002472	-	69	33.138	ENSSBOG00000019803	-	84	34.085	Saimiri_boliviensis_boliviensis
ENSCING00000002472	-	96	34.292	ENSSBOG00000033602	-	90	35.193	Saimiri_boliviensis_boliviensis
ENSCING00000002472	-	93	33.857	ENSSHAG00000010754	TRMT6	87	35.011	Sarcophilus_harrisii
ENSCING00000002472	-	97	36.264	ENSSFOG00015008429	trmt6	91	36.264	Scleropages_formosus
ENSCING00000002472	-	96	34.899	ENSSMAG00000005352	trmt6	94	34.348	Scophthalmus_maximus
ENSCING00000002472	-	96	34.222	ENSSDUG00000008294	trmt6	94	35.269	Seriola_dumerili
ENSCING00000002472	-	96	33.778	ENSSLDG00000002180	trmt6	94	34.914	Seriola_lalandi_dorsalis
ENSCING00000002472	-	95	30.425	ENSSARG00000005487	TRMT6	89	31.453	Sorex_araneus
ENSCING00000002472	-	96	36.036	ENSSPAG00000011628	trmt6	94	36.900	Stegastes_partitus
ENSCING00000002472	-	93	34.703	ENSSSCG00000007046	TRMT6	63	35.398	Sus_scrofa
ENSCING00000002472	-	93	34.234	ENSTGUG00000002195	TRMT6	90	36.344	Taeniopygia_guttata
ENSCING00000002472	-	96	36.754	ENSTRUG00000007153	trmt6	94	37.413	Takifugu_rubripes
ENSCING00000002472	-	99	36.134	ENSTNIG00000010726	TRMT6	94	35.865	Tetraodon_nigroviridis
ENSCING00000002472	-	58	45.000	ENSTBEG00000016317	TRMT6	50	46.491	Tupaia_belangeri
ENSCING00000002472	-	96	33.705	ENSTTRG00000012889	TRMT6	90	34.632	Tursiops_truncatus
ENSCING00000002472	-	96	33.929	ENSUAMG00000008674	TRMT6	89	34.549	Ursus_americanus
ENSCING00000002472	-	96	33.929	ENSUMAG00000004999	TRMT6	90	34.764	Ursus_maritimus
ENSCING00000002472	-	96	33.698	ENSVPAG00000002371	TRMT6	90	34.607	Vicugna_pacos
ENSCING00000002472	-	96	33.628	ENSVVUG00000023370	TRMT6	90	34.549	Vulpes_vulpes
ENSCING00000002472	-	97	34.066	ENSXETG00000004501	trmt6	90	34.066	Xenopus_tropicalis
ENSCING00000002472	-	93	35.751	ENSXCOG00000007761	trmt6	91	36.456	Xiphophorus_couchianus
ENSCING00000002472	-	96	35.347	ENSXMAG00000008592	trmt6	95	36.009	Xiphophorus_maculatus