EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002567 (Gene tree)
Gene ID: 100170052
Gene Symbol: -
Alias: -
Full Name: zinc finger (CCHC)-15
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2238 bases
Position: chrHT000156.1:25607-27844
Accession: 100170052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005236	tRNA-synt_2d	PF01409.20	2e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005236	-	1511	XM_002128110	ENSCINP00000005236	497 (aa)	XP_002128146	F6UF05

Gene Model

Click here to download ENSCING00000002567's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002567	-	99	62.575	ENSG00000179115	FARSA	98	62.575	Homo_sapiens
ENSCING00000002567	-	99	66.801	ENSAPOG00000011465	farsa	99	66.801	Acanthochromis_polyacanthus
ENSCING00000002567	-	99	61.569	ENSAMEG00000012446	FARSA	98	61.569	Ailuropoda_melanoleuca
ENSCING00000002567	-	99	62.575	ENSACIG00000020499	farsa	99	62.575	Amphilophus_citrinellus
ENSCING00000002567	-	99	67.203	ENSAOCG00000000581	farsa	99	67.203	Amphiprion_ocellaris
ENSCING00000002567	-	99	67.002	ENSAPEG00000017695	farsa	99	67.002	Amphiprion_percula
ENSCING00000002567	-	96	56.576	ENSATEG00000012633	farsa	96	56.576	Anabas_testudineus
ENSCING00000002567	-	96	64.092	ENSATEG00000012807	farsa	96	64.092	Anabas_testudineus
ENSCING00000002567	-	95	65.393	ENSACAG00000017166	FARSA	79	65.393	Anolis_carolinensis
ENSCING00000002567	-	99	63.286	ENSANAG00000037420	FARSA	98	62.777	Aotus_nancymaae
ENSCING00000002567	-	99	66.600	ENSACLG00000001716	farsa	99	66.600	Astatotilapia_calliptera
ENSCING00000002567	-	99	65.191	ENSAMXG00000037912	farsa	99	65.191	Astyanax_mexicanus
ENSCING00000002567	-	99	61.368	ENSBTAG00000021374	FARSA	98	61.368	Bos_taurus
ENSCING00000002567	-	99	59.026	WBGene00001497	fars-1	98	59.026	Caenorhabditis_elegans
ENSCING00000002567	-	99	62.955	ENSCJAG00000004686	FARSA	97	59.960	Callithrix_jacchus
ENSCING00000002567	-	99	61.972	ENSCAFG00000017096	FARSA	98	61.972	Canis_familiaris
ENSCING00000002567	-	99	61.972	ENSCAFG00020005315	FARSA	98	61.972	Canis_lupus_dingo
ENSCING00000002567	-	99	57.948	ENSCHIG00000022617	FARSA	98	57.948	Capra_hircus
ENSCING00000002567	-	92	60.784	ENSTSYG00000002595	FARSA	83	60.784	Carlito_syrichta
ENSCING00000002567	-	91	63.877	ENSCAPG00000011353	FARSA	95	64.509	Cavia_aperea
ENSCING00000002567	-	96	64.017	ENSCPOG00000000787	FARSA	94	64.017	Cavia_porcellus
ENSCING00000002567	-	99	62.880	ENSCCAG00000028176	FARSA	98	62.374	Cebus_capucinus
ENSCING00000002567	-	96	64.017	ENSCLAG00000015489	FARSA	94	64.017	Chinchilla_lanigera
ENSCING00000002567	-	94	65.236	ENSCSAG00000006530	FARSA	97	65.236	Chlorocebus_sabaeus
ENSCING00000002567	-	95	65.817	ENSCPBG00000023915	FARSA	98	63.581	Chrysemys_picta_bellii
ENSCING00000002567	-	100	89.336	ENSCSAVG00000010683	-	99	89.336	Ciona_savignyi
ENSCING00000002567	-	98	63.673	ENSCANG00000043649	-	96	63.673	Colobus_angolensis_palliatus
ENSCING00000002567	-	96	63.598	ENSCGRG00001019769	Farsa	98	61.771	Cricetulus_griseus_chok1gshd
ENSCING00000002567	-	96	63.598	ENSCGRG00000013415	Farsa	98	61.771	Cricetulus_griseus_crigri
ENSCING00000002567	-	99	66.398	ENSCSEG00000016214	farsa	96	66.398	Cynoglossus_semilaevis
ENSCING00000002567	-	99	67.203	ENSCVAG00000007907	farsa	99	67.203	Cyprinodon_variegatus
ENSCING00000002567	-	99	65.795	ENSDARG00000098825	farsa	99	65.795	Danio_rerio
ENSCING00000002567	-	96	64.076	ENSDNOG00000032350	FARSA	97	64.076	Dasypus_novemcinctus
ENSCING00000002567	-	96	64.854	ENSDORG00000010118	Farsa	94	64.854	Dipodomys_ordii
ENSCING00000002567	-	99	62.677	FBgn0030007	alpha-PheRS	99	62.677	Drosophila_melanogaster
ENSCING00000002567	-	99	56.137	ENSETEG00000018673	FARSA	98	56.137	Echinops_telfairi
ENSCING00000002567	-	60	53.872	ENSEBUG00000008545	farsa	99	53.872	Eptatretus_burgeri
ENSCING00000002567	-	90	54.102	ENSEASG00005004093	FARSA	92	54.102	Equus_asinus_asinus
ENSCING00000002567	-	96	63.389	ENSECAG00000015139	FARSA	89	63.389	Equus_caballus
ENSCING00000002567	-	99	66.126	ENSELUG00000010183	farsa	99	67.329	Esox_lucius
ENSCING00000002567	-	99	61.972	ENSFCAG00000023511	FARSA	98	61.972	Felis_catus
ENSCING00000002567	-	96	64.017	ENSFDAG00000005987	FARSA	94	64.017	Fukomys_damarensis
ENSCING00000002567	-	99	66.600	ENSFHEG00000009382	farsa	94	66.600	Fundulus_heteroclitus
ENSCING00000002567	-	99	67.068	ENSGMOG00000018319	farsa	99	67.068	Gadus_morhua
ENSCING00000002567	-	95	63.270	ENSGALG00000040258	FARSA	83	63.270	Gallus_gallus
ENSCING00000002567	-	99	65.795	ENSGAFG00000014146	farsa	99	65.795	Gambusia_affinis
ENSCING00000002567	-	96	67.223	ENSGACG00000006278	farsa	96	67.223	Gasterosteus_aculeatus
ENSCING00000002567	-	99	63.783	ENSGAGG00000000753	FARSA	98	63.783	Gopherus_agassizii
ENSCING00000002567	-	98	63.265	ENSGGOG00000003418	FARSA	96	63.265	Gorilla_gorilla
ENSCING00000002567	-	99	66.801	ENSHBUG00000019852	farsa	99	66.801	Haplochromis_burtoni
ENSCING00000002567	-	96	64.017	ENSHGLG00000005213	FARSA	95	64.017	Heterocephalus_glaber_female
ENSCING00000002567	-	96	64.017	ENSHGLG00100009586	FARSA	94	64.017	Heterocephalus_glaber_male
ENSCING00000002567	-	98	67.143	ENSHCOG00000019548	farsa	98	67.143	Hippocampus_comes
ENSCING00000002567	-	99	66.197	ENSIPUG00000007635	farsa	99	66.197	Ictalurus_punctatus
ENSCING00000002567	-	96	64.017	ENSSTOG00000008748	FARSA	94	64.017	Ictidomys_tridecemlineatus
ENSCING00000002567	-	99	65.996	ENSKMAG00000010698	farsa	99	65.996	Kryptolebias_marmoratus
ENSCING00000002567	-	85	64.218	ENSLBEG00000001258	farsa	96	64.218	Labrus_bergylta
ENSCING00000002567	-	98	67.143	ENSLBEG00000006757	-	98	67.143	Labrus_bergylta
ENSCING00000002567	-	92	64.706	ENSLOCG00000008389	farsa	95	64.706	Lepisosteus_oculatus
ENSCING00000002567	-	99	61.771	ENSLAFG00000016154	FARSA	98	61.771	Loxodonta_africana
ENSCING00000002567	-	99	62.978	ENSMFAG00000030595	FARSA	98	62.978	Macaca_fascicularis
ENSCING00000002567	-	99	62.978	ENSMMUG00000004390	FARSA	98	62.978	Macaca_mulatta
ENSCING00000002567	-	99	62.978	ENSMNEG00000043866	FARSA	98	62.978	Macaca_nemestrina
ENSCING00000002567	-	99	62.675	ENSMLEG00000029157	FARSA	98	62.675	Mandrillus_leucophaeus
ENSCING00000002567	-	98	65.510	ENSMAMG00000010636	farsa	98	65.510	Mastacembelus_armatus
ENSCING00000002567	-	99	66.600	ENSMZEG00005002319	farsa	99	66.600	Maylandia_zebra
ENSCING00000002567	-	96	63.389	ENSMAUG00000009188	Farsa	98	61.569	Mesocricetus_auratus
ENSCING00000002567	-	99	62.777	ENSMICG00000016272	FARSA	98	62.777	Microcebus_murinus
ENSCING00000002567	-	96	63.466	ENSMOCG00000011399	Farsa	98	61.647	Microtus_ochrogaster
ENSCING00000002567	-	98	64.490	ENSMMOG00000006287	farsa	98	64.490	Mola_mola
ENSCING00000002567	-	96	63.808	ENSMODG00000011519	FARSA	96	63.808	Monodelphis_domestica
ENSCING00000002567	-	96	66.176	ENSMALG00000001972	farsa	99	66.176	Monopterus_albus
ENSCING00000002567	-	96	63.674	MGP_CAROLIEiJ_G0031312	Farsa	98	61.847	Mus_caroli
ENSCING00000002567	-	96	63.674	ENSMUSG00000003808	Farsa	98	61.847	Mus_musculus
ENSCING00000002567	-	96	63.257	MGP_PahariEiJ_G0022917	Farsa	98	61.647	Mus_pahari
ENSCING00000002567	-	96	63.674	MGP_SPRETEiJ_G0032431	Farsa	98	61.847	Mus_spretus
ENSCING00000002567	-	99	62.374	ENSMPUG00000004400	FARSA	98	62.374	Mustela_putorius_furo
ENSCING00000002567	-	99	62.374	ENSMLUG00000012767	FARSA	98	62.374	Myotis_lucifugus
ENSCING00000002567	-	74	66.304	ENSNGAG00000018353	Farsa	99	66.304	Nannospalax_galili
ENSCING00000002567	-	99	66.398	ENSNBRG00000010063	farsa	99	66.398	Neolamprologus_brichardi
ENSCING00000002567	-	99	62.677	ENSNLEG00000012899	FARSA	98	62.173	Nomascus_leucogenys
ENSCING00000002567	-	99	62.298	ENSMEUG00000014253	FARSA	99	62.298	Notamacropus_eugenii
ENSCING00000002567	-	99	61.972	ENSOPRG00000005004	FARSA	98	61.972	Ochotona_princeps
ENSCING00000002567	-	99	62.173	ENSODEG00000010433	FARSA	98	62.173	Octodon_degus
ENSCING00000002567	-	99	66.801	ENSONIG00000008075	farsa	99	66.801	Oreochromis_niloticus
ENSCING00000002567	-	98	67.143	ENSORLG00000016406	farsa	89	67.143	Oryzias_latipes
ENSCING00000002567	-	98	67.143	ENSORLG00020021978	farsa	98	67.143	Oryzias_latipes_hni
ENSCING00000002567	-	98	67.143	ENSORLG00015015045	farsa	98	67.143	Oryzias_latipes_hsok
ENSCING00000002567	-	98	66.939	ENSOMEG00000017367	farsa	96	66.939	Oryzias_melastigma
ENSCING00000002567	-	96	65.063	ENSOGAG00000012243	FARSA	94	65.063	Otolemur_garnettii
ENSCING00000002567	-	99	61.569	ENSOARG00000009991	FARSA	92	61.569	Ovis_aries
ENSCING00000002567	-	99	62.575	ENSPPAG00000034266	FARSA	98	62.575	Pan_paniscus
ENSCING00000002567	-	99	61.972	ENSPPRG00000000346	FARSA	98	61.972	Panthera_pardus
ENSCING00000002567	-	92	63.834	ENSPTIG00000011502	FARSA	94	63.834	Panthera_tigris_altaica
ENSCING00000002567	-	99	62.575	ENSPTRG00000010550	FARSA	98	62.575	Pan_troglodytes
ENSCING00000002567	-	99	62.978	ENSPANG00000010978	FARSA	97	60.563	Papio_anubis
ENSCING00000002567	-	99	65.594	ENSPKIG00000007170	farsa	99	65.594	Paramormyrops_kingsleyae
ENSCING00000002567	-	90	60.659	ENSPSIG00000012701	FARSA	97	61.915	Pelodiscus_sinensis
ENSCING00000002567	-	98	62.857	ENSPMGG00000001401	farsa	98	62.857	Periophthalmus_magnuspinnatus
ENSCING00000002567	-	96	63.180	ENSPEMG00000012560	Farsa	98	61.368	Peromyscus_maniculatus_bairdii
ENSCING00000002567	-	99	65.323	ENSPMAG00000008453	farsa	99	65.323	Petromyzon_marinus
ENSCING00000002567	-	96	64.017	ENSPCIG00000019294	FARSA	96	64.017	Phascolarctos_cinereus
ENSCING00000002567	-	99	65.795	ENSPFOG00000001201	farsa	99	65.795	Poecilia_formosa
ENSCING00000002567	-	99	65.795	ENSPLAG00000018191	farsa	99	65.795	Poecilia_latipinna
ENSCING00000002567	-	99	65.795	ENSPMEG00000013547	farsa	99	65.795	Poecilia_mexicana
ENSCING00000002567	-	98	62.245	ENSPREG00000013620	farsa	98	62.245	Poecilia_reticulata
ENSCING00000002567	-	99	62.575	ENSPPYG00000009615	FARSA	98	62.575	Pongo_abelii
ENSCING00000002567	-	99	61.569	ENSPCAG00000015721	FARSA	98	61.569	Procavia_capensis
ENSCING00000002567	-	99	62.575	ENSPCOG00000014412	FARSA	98	62.575	Propithecus_coquereli
ENSCING00000002567	-	86	76.744	ENSPVAG00000014714	FARSA	84	76.744	Pteropus_vampyrus
ENSCING00000002567	-	99	66.801	ENSPNYG00000002144	farsa	99	66.801	Pundamilia_nyererei
ENSCING00000002567	-	99	66.061	ENSPNAG00000000869	farsa	99	65.996	Pygocentrus_nattereri
ENSCING00000002567	-	96	63.674	ENSRNOG00000003149	Farsa	94	63.674	Rattus_norvegicus
ENSCING00000002567	-	99	62.777	ENSRBIG00000025585	FARSA	96	65.333	Rhinopithecus_bieti
ENSCING00000002567	-	99	62.777	ENSRROG00000040046	FARSA	97	60.362	Rhinopithecus_roxellana
ENSCING00000002567	-	98	47.782	YFL022C	FRS2	98	47.782	Saccharomyces_cerevisiae
ENSCING00000002567	-	99	62.575	ENSSBOG00000031362	FARSA	98	62.575	Saimiri_boliviensis_boliviensis
ENSCING00000002567	-	90	64.286	ENSSHAG00000015006	FARSA	100	64.286	Sarcophilus_harrisii
ENSCING00000002567	-	99	64.990	ENSSFOG00015014864	farsa	99	64.990	Scleropages_formosus
ENSCING00000002567	-	98	66.939	ENSSMAG00000002358	farsa	98	66.939	Scophthalmus_maximus
ENSCING00000002567	-	99	67.002	ENSSDUG00000008631	farsa	99	67.002	Seriola_dumerili
ENSCING00000002567	-	98	67.755	ENSSLDG00000017108	farsa	98	67.755	Seriola_lalandi_dorsalis
ENSCING00000002567	-	67	78.788	ENSSARG00000006579	-	67	78.788	Sorex_araneus
ENSCING00000002567	-	88	56.264	ENSSPUG00000012509	FARSA	94	56.264	Sphenodon_punctatus
ENSCING00000002567	-	99	66.600	ENSSPAG00000018292	farsa	92	66.600	Stegastes_partitus
ENSCING00000002567	-	99	61.771	ENSSSCG00000013745	FARSA	98	61.771	Sus_scrofa
ENSCING00000002567	-	96	61.088	ENSTRUG00000010624	farsa	96	61.088	Takifugu_rubripes
ENSCING00000002567	-	96	64.092	ENSTNIG00000008330	farsa	96	64.092	Tetraodon_nigroviridis
ENSCING00000002567	-	90	62.054	ENSTBEG00000000396	FARSA	97	62.054	Tupaia_belangeri
ENSCING00000002567	-	87	78.788	ENSTTRG00000003599	FARSA	85	78.788	Tursiops_truncatus
ENSCING00000002567	-	99	61.771	ENSUAMG00000010230	FARSA	98	61.771	Ursus_americanus
ENSCING00000002567	-	99	61.771	ENSUMAG00000006110	FARSA	98	61.771	Ursus_maritimus
ENSCING00000002567	-	99	61.972	ENSVVUG00000024145	FARSA	98	61.972	Vulpes_vulpes
ENSCING00000002567	-	99	66.265	ENSXETG00000007936	farsa	99	66.265	Xenopus_tropicalis
ENSCING00000002567	-	99	59.438	ENSXCOG00000015512	farsa	99	59.438	Xiphophorus_couchianus
ENSCING00000002567	-	98	66.735	ENSXMAG00000008832	farsa	98	66.735	Xiphophorus_maculatus