EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002570 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 6547 bases
Position: chr9:4082988-4089534
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005300	Calreticulin	PF00262.18	6.5e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005300	-	2120	-	ENSCINP00000005300	275 (aa)	-	F7B397

Gene Model

Click here to download ENSCING00000002570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002570's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002570	-	83	30.085	ENSG00000269058	CALR3	56	30.085	Homo_sapiens
ENSCING00000002570	-	85	64.530	ENSG00000127022	CANX	100	69.466	Homo_sapiens
ENSCING00000002570	-	85	61.373	ENSG00000153132	CLGN	72	54.198	Homo_sapiens
ENSCING00000002570	-	81	35.111	ENSAPOG00000020037	calr	57	33.195	Acanthochromis_polyacanthus
ENSCING00000002570	-	83	34.498	ENSAPOG00000003358	-	54	34.498	Acanthochromis_polyacanthus
ENSCING00000002570	-	81	33.778	ENSAOCG00000002978	calr	51	31.950	Amphiprion_ocellaris
ENSCING00000002570	-	78	36.574	ENSACAG00000022598	-	52	36.574	Anolis_carolinensis
ENSCING00000002570	-	81	33.929	ENSACAG00000017141	CALR	53	32.171	Anolis_carolinensis
ENSCING00000002570	-	81	35.111	ENSANAG00000021327	CALR	52	32.819	Aotus_nancymaae
ENSCING00000002570	-	82	33.772	ENSACLG00000018909	-	52	33.772	Astatotilapia_calliptera
ENSCING00000002570	-	84	31.897	ENSBTAG00000033222	CALR3	54	31.897	Bos_taurus
ENSCING00000002570	-	84	35.345	WBGene00000802	crt-1	53	35.345	Caenorhabditis_elegans
ENSCING00000002570	-	83	30.508	ENSCJAG00000013978	CALR3	56	30.508	Callithrix_jacchus
ENSCING00000002570	-	85	63.675	ENSCAFG00000000348	CANX	58	63.675	Canis_familiaris
ENSCING00000002570	-	84	31.466	ENSCHIG00000015217	CALR3	54	31.466	Capra_hircus
ENSCING00000002570	-	82	30.263	ENSCCAG00000029775	CALR3	64	30.263	Cebus_capucinus
ENSCING00000002570	-	81	35.371	ENSCATG00000033446	CALR	52	35.371	Cercocebus_atys
ENSCING00000002570	-	81	35.556	ENSCSAG00000006527	CALR	51	34.855	Chlorocebus_sabaeus
ENSCING00000002570	-	92	33.333	ENSCSAVG00000000885	-	52	33.333	Ciona_savignyi
ENSCING00000002570	-	86	83.898	ENSCSAVG00000009611	-	50	83.898	Ciona_savignyi
ENSCING00000002570	-	84	32.328	ENSCGRG00001021544	Calr3	55	32.328	Cricetulus_griseus_chok1gshd
ENSCING00000002570	-	84	32.328	ENSCGRG00000016063	Calr3	55	32.328	Cricetulus_griseus_crigri
ENSCING00000002570	-	81	33.482	ENSCSEG00000015580	calr3b	52	32.707	Cynoglossus_semilaevis
ENSCING00000002570	-	87	33.061	ENSCVAG00000023067	calr	51	33.061	Cyprinodon_variegatus
ENSCING00000002570	-	93	32.171	ENSCVAG00000017570	calr3b	51	32.171	Cyprinodon_variegatus
ENSCING00000002570	-	82	33.772	ENSELUG00000022861	CALR3	55	33.772	Esox_lucius
ENSCING00000002570	-	74	42.365	ENSELUG00000005053	si:ch211-274f20.2	73	43.316	Esox_lucius
ENSCING00000002570	-	63	36.994	ENSFALG00000011550	CALR	84	36.994	Ficedula_albicollis
ENSCING00000002570	-	83	30.802	ENSFDAG00000010132	CALR3	58	30.802	Fukomys_damarensis
ENSCING00000002570	-	85	34.322	ENSFHEG00000009974	calr3b	51	34.322	Fundulus_heteroclitus
ENSCING00000002570	-	82	33.628	ENSGMOG00000014352	calr	50	32.895	Gadus_morhua
ENSCING00000002570	-	63	38.857	ENSGALG00000003914	CALR3	51	36.486	Gallus_gallus
ENSCING00000002570	-	93	31.395	ENSGALG00000040368	CALR	53	31.395	Gallus_gallus
ENSCING00000002570	-	93	31.907	ENSGAFG00000020079	calr3b	56	31.907	Gambusia_affinis
ENSCING00000002570	-	87	33.195	ENSGAFG00000014710	calr	51	33.607	Gambusia_affinis
ENSCING00000002570	-	81	33.778	ENSGACG00000011040	calr	53	33.778	Gasterosteus_aculeatus
ENSCING00000002570	-	84	32.479	ENSGACG00000003052	-	54	32.479	Gasterosteus_aculeatus
ENSCING00000002570	-	87	33.610	ENSHBUG00000000628	calr	51	33.195	Haplochromis_burtoni
ENSCING00000002570	-	82	33.333	ENSHCOG00000008974	-	50	33.333	Hippocampus_comes
ENSCING00000002570	-	81	33.333	ENSHCOG00000002655	calr	55	32.174	Hippocampus_comes
ENSCING00000002570	-	94	32.819	ENSIPUG00000001657	calr	58	33.206	Ictalurus_punctatus
ENSCING00000002570	-	81	30.172	ENSSTOG00000012079	CALR3	55	30.172	Ictidomys_tridecemlineatus
ENSCING00000002570	-	84	35.193	ENSSTOG00000008774	CALR	50	34.335	Ictidomys_tridecemlineatus
ENSCING00000002570	-	81	35.111	ENSJJAG00000000115	Calr	53	33.591	Jaculus_jaculus
ENSCING00000002570	-	87	33.195	ENSKMAG00000022281	calr	50	32.780	Kryptolebias_marmoratus
ENSCING00000002570	-	93	32.819	ENSLBEG00000005664	calr	53	32.819	Labrus_bergylta
ENSCING00000002570	-	82	32.895	ENSLBEG00000014490	-	52	32.895	Labrus_bergylta
ENSCING00000002570	-	82	34.211	ENSLBEG00000017234	calr3b	55	34.211	Labrus_bergylta
ENSCING00000002570	-	81	32.444	ENSLOCG00000009468	calr	53	30.769	Lepisosteus_oculatus
ENSCING00000002570	-	85	64.103	ENSMMUG00000012370	CANX	60	69.189	Macaca_mulatta
ENSCING00000002570	-	83	30.085	ENSMMUG00000040142	CALR3	56	30.085	Macaca_mulatta
ENSCING00000002570	-	81	35.556	ENSMMUG00000004392	CALR	50	35.556	Macaca_mulatta
ENSCING00000002570	-	84	32.479	ENSMAMG00000022202	-	50	32.479	Mastacembelus_armatus
ENSCING00000002570	-	87	33.610	ENSMZEG00005004412	calr	51	33.195	Maylandia_zebra
ENSCING00000002570	-	63	36.416	ENSMGAG00000002470	CALR	69	36.416	Meleagris_gallopavo
ENSCING00000002570	-	84	30.603	ENSMAUG00000011954	Calr3	55	30.603	Mesocricetus_auratus
ENSCING00000002570	-	84	30.252	ENSMICG00000026331	CALR3	57	30.252	Microcebus_murinus
ENSCING00000002570	-	83	30.802	ENSMOCG00000015755	Calr3	57	30.802	Microtus_ochrogaster
ENSCING00000002570	-	96	60.886	ENSMMOG00000004282	canx	57	60.886	Mola_mola
ENSCING00000002570	-	94	31.154	ENSMMOG00000008354	-	52	31.154	Mola_mola
ENSCING00000002570	-	60	64.458	ENSMODG00000016281	-	62	64.458	Monodelphis_domestica
ENSCING00000002570	-	81	34.632	ENSMODG00000011530	CALR	64	32.830	Monodelphis_domestica
ENSCING00000002570	-	51	50.714	ENSMODG00000013879	-	60	50.714	Monodelphis_domestica
ENSCING00000002570	-	78	32.093	ENSMODG00000000946	-	55	32.093	Monodelphis_domestica
ENSCING00000002570	-	87	31.950	ENSMALG00000016213	calr	50	31.535	Monopterus_albus
ENSCING00000002570	-	84	31.034	MGP_CAROLIEiJ_G0031218	Calr3	55	31.034	Mus_caroli
ENSCING00000002570	-	84	31.034	ENSMUSG00000019732	Calr3	55	31.034	Mus_musculus
ENSCING00000002570	-	84	31.034	MGP_PahariEiJ_G0021683	Calr3	55	31.034	Mus_pahari
ENSCING00000002570	-	85	31.064	MGP_SPRETEiJ_G0027250	Calr4	50	30.705	Mus_spretus
ENSCING00000002570	-	84	31.034	MGP_SPRETEiJ_G0032339	Calr3	55	31.034	Mus_spretus
ENSCING00000002570	-	83	30.000	ENSMPUG00000016034	CALR3	54	30.000	Mustela_putorius_furo
ENSCING00000002570	-	84	30.603	ENSNGAG00000022659	Calr3	55	30.603	Nannospalax_galili
ENSCING00000002570	-	87	32.377	ENSNBRG00000013574	calr	63	32.653	Neolamprologus_brichardi
ENSCING00000002570	-	81	34.667	ENSODEG00000010711	-	52	34.667	Octodon_degus
ENSCING00000002570	-	87	33.195	ENSONIG00000001987	calr	51	32.780	Oreochromis_niloticus
ENSCING00000002570	-	82	33.772	ENSORLG00000018011	calr3b	50	33.772	Oryzias_latipes
ENSCING00000002570	-	82	33.772	ENSORLG00020003664	calr3b	50	33.772	Oryzias_latipes_hni
ENSCING00000002570	-	90	32.932	ENSORLG00020013790	calr	53	32.530	Oryzias_latipes_hni
ENSCING00000002570	-	82	33.772	ENSORLG00015003433	calr3b	50	33.772	Oryzias_latipes_hsok
ENSCING00000002570	-	83	34.783	ENSORLG00015009755	calr	55	34.348	Oryzias_latipes_hsok
ENSCING00000002570	-	82	30.131	ENSOMEG00000022510	-	52	31.004	Oryzias_melastigma
ENSCING00000002570	-	82	33.772	ENSOMEG00000012610	calr3b	56	33.772	Oryzias_melastigma
ENSCING00000002570	-	83	32.751	ENSOMEG00000007906	-	50	32.751	Oryzias_melastigma
ENSCING00000002570	-	84	31.034	ENSOARG00000018984	CALR3	54	31.034	Ovis_aries
ENSCING00000002570	-	83	30.085	ENSPTRG00000010645	CALR3	56	30.085	Pan_troglodytes
ENSCING00000002570	-	81	33.333	ENSPKIG00000007335	calr	58	32.046	Paramormyrops_kingsleyae
ENSCING00000002570	-	83	31.878	ENSPKIG00000000371	calr3b	50	31.878	Paramormyrops_kingsleyae
ENSCING00000002570	-	82	32.456	ENSPSIG00000013549	CALR3	52	32.456	Pelodiscus_sinensis
ENSCING00000002570	-	82	35.683	ENSPMGG00000014733	calr3b	55	36.087	Periophthalmus_magnuspinnatus
ENSCING00000002570	-	84	31.034	ENSPEMG00000023150	Calr3	55	31.034	Peromyscus_maniculatus_bairdii
ENSCING00000002570	-	84	30.043	ENSPCIG00000019623	CALR3	53	30.043	Phascolarctos_cinereus
ENSCING00000002570	-	96	31.579	ENSPFOG00000002251	calr3b	55	31.907	Poecilia_formosa
ENSCING00000002570	-	87	33.195	ENSPFOG00000005960	calr	51	33.607	Poecilia_formosa
ENSCING00000002570	-	93	31.907	ENSPLAG00000004753	calr3b	52	31.907	Poecilia_latipinna
ENSCING00000002570	-	87	32.780	ENSPLAG00000005102	calr	51	33.197	Poecilia_latipinna
ENSCING00000002570	-	93	31.907	ENSPMEG00000019403	calr3b	51	31.907	Poecilia_mexicana
ENSCING00000002570	-	87	33.195	ENSPMEG00000015041	calr	51	34.016	Poecilia_mexicana
ENSCING00000002570	-	93	32.296	ENSPREG00000012309	calr3b	58	32.296	Poecilia_reticulata
ENSCING00000002570	-	60	33.721	ENSPPYG00000009689	CALR3	50	33.721	Pongo_abelii
ENSCING00000002570	-	81	34.934	ENSPVAG00000014715	CALR	51	34.286	Pteropus_vampyrus
ENSCING00000002570	-	82	33.772	ENSPNYG00000003111	-	52	33.772	Pundamilia_nyererei
ENSCING00000002570	-	82	56.637	ENSPNAG00000012244	si:ch211-274f20.2	92	57.062	Pygocentrus_nattereri
ENSCING00000002570	-	84	31.897	ENSRNOG00000013260	Calr3	55	31.897	Rattus_norvegicus
ENSCING00000002570	-	83	30.085	ENSRROG00000044958	CALR3	56	30.085	Rhinopithecus_roxellana
ENSCING00000002570	-	59	34.146	ENSSBOG00000029074	CALR3	63	34.146	Saimiri_boliviensis_boliviensis
ENSCING00000002570	-	81	34.498	ENSSBOG00000019002	CALR	56	31.641	Saimiri_boliviensis_boliviensis
ENSCING00000002570	-	81	33.188	ENSSHAG00000014968	CALR	53	30.798	Sarcophilus_harrisii
ENSCING00000002570	-	82	32.301	ENSSFOG00015016048	calr	52	31.679	Scleropages_formosus
ENSCING00000002570	-	87	32.780	ENSSDUG00000000052	calr	58	32.365	Seriola_dumerili
ENSCING00000002570	-	82	33.333	ENSSDUG00000019247	-	54	33.333	Seriola_dumerili
ENSCING00000002570	-	87	32.780	ENSSLDG00000004511	calr	58	32.365	Seriola_lalandi_dorsalis
ENSCING00000002570	-	82	33.333	ENSSLDG00000012482	-	54	33.333	Seriola_lalandi_dorsalis
ENSCING00000002570	-	76	31.628	ENSSPUG00000008775	-	51	31.628	Sphenodon_punctatus
ENSCING00000002570	-	81	34.956	ENSSPAG00000010921	-	53	34.956	Stegastes_partitus
ENSCING00000002570	-	81	34.667	ENSSPAG00000018184	calr	51	32.365	Stegastes_partitus
ENSCING00000002570	-	53	51.007	ENSTGUG00000015105	-	72	51.007	Taeniopygia_guttata
ENSCING00000002570	-	89	32.389	ENSTNIG00000015492	calr	61	32.389	Tetraodon_nigroviridis
ENSCING00000002570	-	85	58.974	ENSTNIG00000004600	clgn	51	58.974	Tetraodon_nigroviridis
ENSCING00000002570	-	63	72.674	ENSTNIG00000019468	-	92	72.674	Tetraodon_nigroviridis
ENSCING00000002570	-	81	33.333	ENSTBEG00000011852	-	50	33.043	Tupaia_belangeri
ENSCING00000002570	-	94	31.679	ENSXCOG00000018745	calr3b	53	31.679	Xiphophorus_couchianus
ENSCING00000002570	-	87	33.195	ENSXCOG00000010871	calr	51	33.607	Xiphophorus_couchianus
ENSCING00000002570	-	87	33.610	ENSXMAG00000003259	calr	51	34.016	Xiphophorus_maculatus
ENSCING00000002570	-	94	31.679	ENSXMAG00000026007	calr3b	53	31.679	Xiphophorus_maculatus