EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002697 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 9703 bases
Position: chr1:1095109-1104811
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005497	KH_1	PF00013.29	3.3e-45	1	3
ENSCINP00000005497	KH_1	PF00013.29	3.3e-45	2	3
ENSCINP00000005497	KH_1	PF00013.29	3.3e-45	3	3
ENSCINP00000005497	KH_2	PF07650.17	8.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005497	-	1335	-	ENSCINP00000005497	427 (aa)	-	F6X134

Gene Model

Click here to download ENSCING00000002697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002697's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002697	-	94	37.336	ENSG00000165119	HNRNPK	68	60.294	Homo_sapiens
ENSCING00000002697	-	94	39.171	ENSAMEG00000003926	HNRNPK	63	60.563	Ailuropoda_melanoleuca
ENSCING00000002697	-	73	61.765	ENSACIG00000014814	hnrpkl	67	61.765	Amphilophus_citrinellus
ENSCING00000002697	-	95	40.783	ENSAPEG00000019850	hnrpkl	67	59.494	Amphiprion_percula
ENSCING00000002697	-	98	40.268	ENSATEG00000014412	hnrpkl	50	45.327	Anabas_testudineus
ENSCING00000002697	-	93	40.686	ENSAPLG00000010986	-	50	45.205	Anas_platyrhynchos
ENSCING00000002697	-	69	58.228	ENSACAG00000001479	HNRNPK	65	58.228	Anolis_carolinensis
ENSCING00000002697	-	93	37.061	ENSANAG00000030728	HNRNPK	63	60.563	Aotus_nancymaae
ENSCING00000002697	-	97	42.105	ENSACLG00000001537	hnrpkl	93	35.897	Astatotilapia_calliptera
ENSCING00000002697	-	93	37.389	ENSBTAG00000021131	HNRNPK	63	60.563	Bos_taurus
ENSCING00000002697	-	56	55.696	ENSBTAG00000008557	-	60	55.696	Bos_taurus
ENSCING00000002697	-	99	34.873	WBGene00017816	hrpk-1	89	46.067	Caenorhabditis_elegans
ENSCING00000002697	-	94	37.555	ENSCJAG00000003750	HNRNPK	63	60.563	Callithrix_jacchus
ENSCING00000002697	-	72	58.228	ENSCAFG00000001399	HNRNPK	63	58.228	Canis_familiaris
ENSCING00000002697	-	94	35.794	ENSCAFG00020023808	-	62	60.563	Canis_lupus_dingo
ENSCING00000002697	-	92	39.202	ENSCHIG00000014738	HNRNPK	62	60.563	Capra_hircus
ENSCING00000002697	-	54	32.308	ENSCHIG00000020267	-	55	33.471	Capra_hircus
ENSCING00000002697	-	94	38.940	ENSCHIG00000016654	-	64	56.962	Capra_hircus
ENSCING00000002697	-	94	38.747	ENSTSYG00000030225	-	64	54.430	Carlito_syrichta
ENSCING00000002697	-	88	38.186	ENSTSYG00000032524	-	62	57.143	Carlito_syrichta
ENSCING00000002697	-	93	36.842	ENSTSYG00000001196	HNRNPK	63	60.563	Carlito_syrichta
ENSCING00000002697	-	90	30.189	ENSTSYG00000036427	-	70	41.758	Carlito_syrichta
ENSCING00000002697	-	94	33.991	ENSCAPG00000006404	-	63	55.696	Cavia_aperea
ENSCING00000002697	-	65	55.696	ENSCPOG00000038762	-	57	55.696	Cavia_porcellus
ENSCING00000002697	-	71	57.143	ENSCCAG00000034658	HNRNPK	63	60.563	Cebus_capucinus
ENSCING00000002697	-	94	38.940	ENSCCAG00000026536	-	63	56.962	Cebus_capucinus
ENSCING00000002697	-	93	38.889	ENSCATG00000036875	HNRNPK	63	60.563	Cercocebus_atys
ENSCING00000002697	-	94	31.220	ENSCATG00000033862	-	72	37.736	Cercocebus_atys
ENSCING00000002697	-	94	38.688	ENSCLAG00000005883	HNRNPK	63	59.155	Chinchilla_lanigera
ENSCING00000002697	-	94	36.761	ENSCSAG00000007560	-	64	55.128	Chlorocebus_sabaeus
ENSCING00000002697	-	93	37.061	ENSCHOG00000010832	HNRNPK	63	60.563	Choloepus_hoffmanni
ENSCING00000002697	-	93	37.061	ENSCANG00000034329	HNRNPK	63	60.563	Colobus_angolensis_palliatus
ENSCING00000002697	-	89	36.296	ENSCANG00000040017	-	63	55.696	Colobus_angolensis_palliatus
ENSCING00000002697	-	94	37.209	ENSCGRG00001016951	-	63	60.563	Cricetulus_griseus_chok1gshd
ENSCING00000002697	-	94	39.171	ENSCGRG00000013338	-	63	60.563	Cricetulus_griseus_crigri
ENSCING00000002697	-	97	38.657	ENSCSEG00000012457	hnrnpk	52	43.541	Cynoglossus_semilaevis
ENSCING00000002697	-	70	61.765	ENSCVAG00000023173	hnrpkl	58	61.765	Cyprinodon_variegatus
ENSCING00000002697	-	79	38.522	ENSCVAG00000006278	hnrnpk	58	60.870	Cyprinodon_variegatus
ENSCING00000002697	-	99	40.397	ENSDARG00000007034	hnrpkl	86	31.944	Danio_rerio
ENSCING00000002697	-	97	39.631	ENSDARG00000018914	hnrnpk	89	46.617	Danio_rerio
ENSCING00000002697	-	66	47.887	ENSDNOG00000032633	-	62	47.887	Dasypus_novemcinctus
ENSCING00000002697	-	58	51.899	ENSDNOG00000037853	-	63	51.899	Dasypus_novemcinctus
ENSCING00000002697	-	93	37.061	ENSDNOG00000000026	HNRNPK	63	60.563	Dasypus_novemcinctus
ENSCING00000002697	-	94	39.171	ENSDORG00000016024	-	63	60.563	Dipodomys_ordii
ENSCING00000002697	-	91	37.079	ENSETEG00000016294	-	63	62.121	Echinops_telfairi
ENSCING00000002697	-	94	37.336	ENSEASG00005015086	-	64	58.228	Equus_asinus_asinus
ENSCING00000002697	-	93	38.889	ENSECAG00000025104	HNRNPK	63	60.563	Equus_caballus
ENSCING00000002697	-	70	60.870	ENSEEUG00000014624	HNRNPK	62	60.870	Erinaceus_europaeus
ENSCING00000002697	-	94	39.171	ENSFCAG00000014862	HNRNPK	63	60.563	Felis_catus
ENSCING00000002697	-	93	38.889	ENSFDAG00000012548	HNRNPK	63	60.563	Fukomys_damarensis
ENSCING00000002697	-	99	40.639	ENSFHEG00000022589	hnrpkl	61	61.765	Fundulus_heteroclitus
ENSCING00000002697	-	95	42.619	ENSGAFG00000012633	hnrpkl	56	47.761	Gambusia_affinis
ENSCING00000002697	-	92	41.379	ENSGAFG00000013791	hnrnpk	60	58.667	Gambusia_affinis
ENSCING00000002697	-	64	59.494	ENSGACG00000007581	hnrnpk	75	63.636	Gasterosteus_aculeatus
ENSCING00000002697	-	94	33.638	ENSGGOG00000037201	-	70	50.633	Gorilla_gorilla
ENSCING00000002697	-	93	37.061	ENSGGOG00000015500	HNRNPK	64	60.563	Gorilla_gorilla
ENSCING00000002697	-	97	42.105	ENSHBUG00000006535	hnrpkl	65	61.765	Haplochromis_burtoni
ENSCING00000002697	-	65	56.962	ENSHGLG00000003913	-	55	56.962	Heterocephalus_glaber_female
ENSCING00000002697	-	56	54.430	ENSHGLG00000009920	-	61	54.430	Heterocephalus_glaber_female
ENSCING00000002697	-	91	39.192	ENSHGLG00000017317	-	63	62.121	Heterocephalus_glaber_female
ENSCING00000002697	-	58	45.070	ENSHGLG00000006582	-	65	45.070	Heterocephalus_glaber_female
ENSCING00000002697	-	58	45.070	ENSHGLG00100005886	-	64	45.070	Heterocephalus_glaber_male
ENSCING00000002697	-	67	53.846	ENSHGLG00100008300	-	78	41.892	Heterocephalus_glaber_male
ENSCING00000002697	-	93	38.889	ENSHGLG00100014828	HNRNPK	63	60.563	Heterocephalus_glaber_male
ENSCING00000002697	-	65	56.962	ENSHGLG00100005962	-	55	56.962	Heterocephalus_glaber_male
ENSCING00000002697	-	57	55.696	ENSHGLG00100013756	-	52	55.696	Heterocephalus_glaber_male
ENSCING00000002697	-	71	54.430	ENSHGLG00100007789	-	65	54.430	Heterocephalus_glaber_male
ENSCING00000002697	-	95	41.920	ENSHCOG00000019870	hnrpkl	64	58.228	Hippocampus_comes
ENSCING00000002697	-	94	38.914	ENSSTOG00000014107	HNRNPK	63	60.563	Ictidomys_tridecemlineatus
ENSCING00000002697	-	87	32.405	ENSJJAG00000012458	-	57	57.576	Jaculus_jaculus
ENSCING00000002697	-	91	39.192	ENSJJAG00000013297	-	63	62.121	Jaculus_jaculus
ENSCING00000002697	-	53	38.168	ENSJJAG00000018368	-	55	38.914	Jaculus_jaculus
ENSCING00000002697	-	95	42.381	ENSKMAG00000012225	hnrpkl	71	56.000	Kryptolebias_marmoratus
ENSCING00000002697	-	98	36.674	ENSKMAG00000020943	hnrnpk	66	61.017	Kryptolebias_marmoratus
ENSCING00000002697	-	98	40.397	ENSLBEG00000019787	hnrpkl	65	59.494	Labrus_bergylta
ENSCING00000002697	-	74	54.430	ENSLACG00000005638	HNRNPK	62	56.338	Latimeria_chalumnae
ENSCING00000002697	-	94	41.958	ENSLOCG00000002262	hnrpkl	62	61.972	Lepisosteus_oculatus
ENSCING00000002697	-	94	37.336	ENSLAFG00000026567	HNRNPK	63	60.563	Loxodonta_africana
ENSCING00000002697	-	92	39.952	ENSMFAG00000042755	HNRNPK	63	60.563	Macaca_fascicularis
ENSCING00000002697	-	93	39.858	ENSMMUG00000018871	HNRNPK	63	60.563	Macaca_mulatta
ENSCING00000002697	-	92	39.952	ENSMNEG00000044879	HNRNPK	63	60.563	Macaca_nemestrina
ENSCING00000002697	-	92	39.952	ENSMLEG00000041139	HNRNPK	63	60.563	Mandrillus_leucophaeus
ENSCING00000002697	-	88	31.910	ENSMLEG00000041606	-	50	51.351	Mandrillus_leucophaeus
ENSCING00000002697	-	94	30.861	ENSMLEG00000039428	-	52	36.066	Mandrillus_leucophaeus
ENSCING00000002697	-	95	40.941	ENSMAMG00000016975	hnrpkl	54	46.766	Mastacembelus_armatus
ENSCING00000002697	-	67	44.240	ENSMZEG00005026207	-	66	44.240	Maylandia_zebra
ENSCING00000002697	-	94	36.786	ENSMAUG00000015268	-	63	60.563	Mesocricetus_auratus
ENSCING00000002697	-	93	39.394	ENSMICG00000015780	HNRNPK	63	60.563	Microcebus_murinus
ENSCING00000002697	-	64	50.633	ENSMICG00000035005	-	61	50.633	Microcebus_murinus
ENSCING00000002697	-	93	33.412	ENSMICG00000035603	-	56	44.068	Microcebus_murinus
ENSCING00000002697	-	94	35.903	ENSMOCG00000014438	-	65	54.430	Microtus_ochrogaster
ENSCING00000002697	-	94	39.171	ENSMOCG00000001446	-	64	58.228	Microtus_ochrogaster
ENSCING00000002697	-	79	39.444	ENSMMOG00000000035	hnrnpk	56	63.235	Mola_mola
ENSCING00000002697	-	96	39.070	ENSMMOG00000002494	hnrpkl	67	61.765	Mola_mola
ENSCING00000002697	-	92	39.202	ENSMODG00000008402	HNRNPK	60	60.563	Monodelphis_domestica
ENSCING00000002697	-	99	40.089	ENSMALG00000003681	hnrpkl	53	44.595	Monopterus_albus
ENSCING00000002697	-	53	44.538	MGP_CAROLIEiJ_G0018599	-	100	46.591	Mus_caroli
ENSCING00000002697	-	94	39.171	ENSMUSG00000021546	Hnrnpk	100	46.591	Mus_musculus
ENSCING00000002697	-	93	38.889	MGP_PahariEiJ_G0019663	Hnrnpk	100	46.591	Mus_pahari
ENSCING00000002697	-	93	38.889	MGP_SPRETEiJ_G0019479	Hnrnpk	100	46.591	Mus_spretus
ENSCING00000002697	-	94	37.336	ENSMPUG00000002059	-	64	58.228	Mustela_putorius_furo
ENSCING00000002697	-	67	59.155	ENSMLUG00000022276	-	62	59.155	Myotis_lucifugus
ENSCING00000002697	-	93	37.061	ENSMLUG00000005871	HNRNPK	63	60.563	Myotis_lucifugus
ENSCING00000002697	-	93	38.889	ENSNGAG00000007861	Hnrnpk	63	60.563	Nannospalax_galili
ENSCING00000002697	-	94	31.206	ENSNGAG00000023622	-	51	31.308	Nannospalax_galili
ENSCING00000002697	-	96	39.211	ENSNBRG00000005627	hnrpkl	64	61.765	Neolamprologus_brichardi
ENSCING00000002697	-	99	32.265	ENSNLEG00000028579	-	70	46.789	Nomascus_leucogenys
ENSCING00000002697	-	93	37.061	ENSNLEG00000003486	HNRNPK	64	60.563	Nomascus_leucogenys
ENSCING00000002697	-	79	35.230	ENSNLEG00000031075	-	63	56.962	Nomascus_leucogenys
ENSCING00000002697	-	70	60.563	ENSMEUG00000006975	HNRNPK	66	60.563	Notamacropus_eugenii
ENSCING00000002697	-	70	60.563	ENSOPRG00000015723	-	66	60.563	Ochotona_princeps
ENSCING00000002697	-	65	50.649	ENSODEG00000005848	-	67	50.649	Octodon_degus
ENSCING00000002697	-	57	48.101	ENSODEG00000010355	-	59	48.101	Octodon_degus
ENSCING00000002697	-	65	49.296	ENSODEG00000004171	-	57	49.296	Octodon_degus
ENSCING00000002697	-	94	38.710	ENSODEG00000005637	HNRNPK	62	59.155	Octodon_degus
ENSCING00000002697	-	71	41.558	ENSODEG00000008457	-	68	41.558	Octodon_degus
ENSCING00000002697	-	94	37.336	ENSOCUG00000010364	HNRNPK	64	58.228	Oryctolagus_cuniculus
ENSCING00000002697	-	94	35.141	ENSOCUG00000025925	-	66	50.633	Oryctolagus_cuniculus
ENSCING00000002697	-	95	41.981	ENSORLG00000004704	hnrpkl	66	59.494	Oryzias_latipes
ENSCING00000002697	-	97	40.984	ENSORLG00020008118	hnrpkl	69	59.494	Oryzias_latipes_hni
ENSCING00000002697	-	90	42.446	ENSORLG00020019741	hnrnpk	61	61.972	Oryzias_latipes_hni
ENSCING00000002697	-	95	42.217	ENSORLG00015015118	hnrpkl	56	46.269	Oryzias_latipes_hsok
ENSCING00000002697	-	90	41.232	ENSOMEG00000023618	hnrnpk	59	61.972	Oryzias_melastigma
ENSCING00000002697	-	95	41.067	ENSOMEG00000010595	hnrpkl	51	40.000	Oryzias_melastigma
ENSCING00000002697	-	93	38.889	ENSOGAG00000007478	HNRNPK	61	60.563	Otolemur_garnettii
ENSCING00000002697	-	57	52.703	ENSOGAG00000024419	-	74	51.220	Otolemur_garnettii
ENSCING00000002697	-	94	37.336	ENSOARG00000000590	-	64	58.228	Ovis_aries
ENSCING00000002697	-	94	37.336	ENSOARG00000015748	-	64	58.228	Ovis_aries
ENSCING00000002697	-	92	35.867	ENSOARG00000014432	-	71	60.000	Ovis_aries
ENSCING00000002697	-	93	37.061	ENSOARG00000008935	-	63	60.563	Ovis_aries
ENSCING00000002697	-	90	34.158	ENSPPAG00000032080	-	70	44.037	Pan_paniscus
ENSCING00000002697	-	93	37.061	ENSPPAG00000043778	HNRNPK	64	60.563	Pan_paniscus
ENSCING00000002697	-	93	37.061	ENSPPRG00000009832	HNRNPK	63	60.563	Panthera_pardus
ENSCING00000002697	-	93	38.889	ENSPTIG00000019742	HNRNPK	63	60.563	Panthera_tigris_altaica
ENSCING00000002697	-	90	32.558	ENSPTRG00000042775	-	61	50.633	Pan_troglodytes
ENSCING00000002697	-	94	37.336	ENSPTRG00000048500	HNRNPK	63	60.563	Pan_troglodytes
ENSCING00000002697	-	94	31.026	ENSPANG00000020406	-	54	33.333	Papio_anubis
ENSCING00000002697	-	94	31.961	ENSPANG00000012070	-	72	39.623	Papio_anubis
ENSCING00000002697	-	93	40.143	ENSPANG00000024881	HNRNPK	63	60.563	Papio_anubis
ENSCING00000002697	-	95	43.301	ENSPKIG00000010245	hnrpkl	54	48.259	Paramormyrops_kingsleyae
ENSCING00000002697	-	94	40.972	ENSPKIG00000021705	hnrnpk	65	59.494	Paramormyrops_kingsleyae
ENSCING00000002697	-	93	39.573	ENSPSIG00000003480	HNRNPK	67	60.563	Pelodiscus_sinensis
ENSCING00000002697	-	63	61.765	ENSPMGG00000008349	hnrnpk	61	61.765	Periophthalmus_magnuspinnatus
ENSCING00000002697	-	69	57.143	ENSPEMG00000012825	Hnrnpk	63	60.563	Peromyscus_maniculatus_bairdii
ENSCING00000002697	-	93	38.497	ENSPCIG00000027665	HNRNPK	62	60.563	Phascolarctos_cinereus
ENSCING00000002697	-	95	42.453	ENSPREG00000002843	hnrpkl	70	59.494	Poecilia_reticulata
ENSCING00000002697	-	93	37.061	ENSPPYG00000019327	HNRNPK	63	60.563	Pongo_abelii
ENSCING00000002697	-	92	32.542	ENSPPYG00000015736	-	66	50.000	Pongo_abelii
ENSCING00000002697	-	69	61.538	ENSPCAG00000016196	HNRNPK	72	50.526	Procavia_capensis
ENSCING00000002697	-	93	39.627	ENSPCOG00000016433	HNRNPK	63	60.563	Propithecus_coquereli
ENSCING00000002697	-	84	38.129	ENSPVAG00000009078	HNRNPK	63	60.563	Pteropus_vampyrus
ENSCING00000002697	-	99	40.618	ENSPNAG00000007549	hnrpkl	51	44.700	Pygocentrus_nattereri
ENSCING00000002697	-	74	60.294	ENSPNAG00000017193	hnrnpk	68	60.294	Pygocentrus_nattereri
ENSCING00000002697	-	94	37.336	ENSRNOG00000019113	Hnrnpk	63	60.563	Rattus_norvegicus
ENSCING00000002697	-	93	38.889	ENSRBIG00000044578	HNRNPK	63	60.563	Rhinopithecus_bieti
ENSCING00000002697	-	94	37.500	ENSRBIG00000035633	-	72	53.165	Rhinopithecus_bieti
ENSCING00000002697	-	83	33.159	ENSRBIG00000033695	-	52	37.705	Rhinopithecus_bieti
ENSCING00000002697	-	67	38.961	ENSRROG00000031863	-	58	48.077	Rhinopithecus_roxellana
ENSCING00000002697	-	93	37.061	ENSRROG00000031710	HNRNPK	63	60.563	Rhinopithecus_roxellana
ENSCING00000002697	-	93	32.243	ENSRROG00000005538	-	52	37.705	Rhinopithecus_roxellana
ENSCING00000002697	-	94	37.500	ENSRROG00000001557	-	74	54.430	Rhinopithecus_roxellana
ENSCING00000002697	-	94	37.336	ENSSBOG00000027191	-	64	58.228	Saimiri_boliviensis_boliviensis
ENSCING00000002697	-	93	38.889	ENSSHAG00000017109	HNRNPK	61	60.563	Sarcophilus_harrisii
ENSCING00000002697	-	99	40.000	ENSSMAG00000007969	hnrpkl	67	59.494	Scophthalmus_maximus
ENSCING00000002697	-	97	38.702	ENSSMAG00000019461	hnrnpk	63	60.294	Scophthalmus_maximus
ENSCING00000002697	-	95	41.259	ENSSDUG00000023797	hnrpkl	52	46.766	Seriola_dumerili
ENSCING00000002697	-	97	40.632	ENSSLDG00000002069	hnrnpk	54	61.972	Seriola_lalandi_dorsalis
ENSCING00000002697	-	96	41.136	ENSSLDG00000005683	hnrpkl	67	59.494	Seriola_lalandi_dorsalis
ENSCING00000002697	-	56	49.367	ENSSPUG00000013545	-	58	49.367	Sphenodon_punctatus
ENSCING00000002697	-	73	61.765	ENSSPAG00000011699	hnrpkl	62	61.765	Stegastes_partitus
ENSCING00000002697	-	89	30.946	ENSSSCG00000033255	-	55	39.241	Sus_scrofa
ENSCING00000002697	-	94	39.171	ENSSSCG00000022760	HNRNPK	61	60.563	Sus_scrofa
ENSCING00000002697	-	99	39.130	ENSTRUG00000000535	hnrpkl	52	42.857	Takifugu_rubripes
ENSCING00000002697	-	94	35.650	ENSTNIG00000007554	hnrpkl	67	58.228	Tetraodon_nigroviridis
ENSCING00000002697	-	71	60.759	ENSTNIG00000006005	hnrnpk	62	60.759	Tetraodon_nigroviridis
ENSCING00000002697	-	93	36.623	ENSTBEG00000001289	HNRNPK	63	57.746	Tupaia_belangeri
ENSCING00000002697	-	91	37.079	ENSTTRG00000016693	-	63	62.121	Tursiops_truncatus
ENSCING00000002697	-	93	38.889	ENSUAMG00000027171	HNRNPK	63	60.563	Ursus_americanus
ENSCING00000002697	-	93	37.061	ENSUMAG00000004818	HNRNPK	63	60.563	Ursus_maritimus
ENSCING00000002697	-	93	37.061	ENSVVUG00000007888	HNRNPK	63	60.563	Vulpes_vulpes
ENSCING00000002697	-	58	61.765	ENSXETG00000011722	hnrnpk	62	61.765	Xenopus_tropicalis
ENSCING00000002697	-	77	61.765	ENSXCOG00000001806	hnrpkl	64	61.765	Xiphophorus_couchianus
ENSCING00000002697	-	95	43.301	ENSXMAG00000004923	hnrpkl	50	47.264	Xiphophorus_maculatus