EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002709 (Gene tree)
Gene ID: 100181928
Gene Symbol: -
Alias: -
Full Name: crooked neck-like protein 1
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2061 bases
Position: chrHT000096.1:80126-82186
Accession: 100181928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005514	HAT	PF02184.16	5.4e-39	1	2
ENSCINP00000005514	HAT	PF02184.16	5.4e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005514	-	2061	XM_002125917	ENSCINP00000005514	686 (aa)	XP_002125953	F6UE02

Gene Model

Click here to download ENSCING00000002709's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002709	-	99	68.824	ENSG00000101343	CRNKL1	96	70.091	Homo_sapiens
ENSCING00000002709	-	99	67.489	ENSAPOG00000009705	crnkl1	96	68.373	Acanthochromis_polyacanthus
ENSCING00000002709	-	99	68.235	ENSAMEG00000000270	CRNKL1	80	69.637	Ailuropoda_melanoleuca
ENSCING00000002709	-	99	66.523	ENSACIG00000015267	crnkl1	89	68.263	Amphilophus_citrinellus
ENSCING00000002709	-	99	67.489	ENSAOCG00000021964	crnkl1	88	68.976	Amphiprion_ocellaris
ENSCING00000002709	-	99	67.681	ENSAPEG00000015041	crnkl1	88	69.127	Amphiprion_percula
ENSCING00000002709	-	99	66.281	ENSATEG00000001068	crnkl1	87	67.970	Anabas_testudineus
ENSCING00000002709	-	99	66.959	ENSAPLG00000013105	CRNKL1	97	67.868	Anas_platyrhynchos
ENSCING00000002709	-	99	67.254	ENSACAG00000005284	CRNKL1	97	68.675	Anolis_carolinensis
ENSCING00000002709	-	92	69.157	ENSANAG00000024889	CRNKL1	97	69.593	Aotus_nancymaae
ENSCING00000002709	-	99	66.429	ENSACLG00000010813	crnkl1	88	68.976	Astatotilapia_calliptera
ENSCING00000002709	-	97	68.524	ENSAMXG00000018334	crnkl1	89	68.524	Astyanax_mexicanus
ENSCING00000002709	-	99	68.328	ENSBTAG00000008472	CRNKL1	96	69.789	Bos_taurus
ENSCING00000002709	-	93	62.773	WBGene00019762	M03F8.3	87	63.206	Caenorhabditis_elegans
ENSCING00000002709	-	99	68.421	ENSCJAG00000005393	CRNKL1	96	69.789	Callithrix_jacchus
ENSCING00000002709	-	99	68.235	ENSCAFG00000005333	CRNKL1	91	69.637	Canis_familiaris
ENSCING00000002709	-	99	67.982	ENSCAFG00020027488	CRNKL1	96	69.637	Canis_lupus_dingo
ENSCING00000002709	-	99	67.595	ENSCHIG00000013171	CRNKL1	96	68.882	Capra_hircus
ENSCING00000002709	-	99	67.982	ENSTSYG00000004197	CRNKL1	96	69.637	Carlito_syrichta
ENSCING00000002709	-	95	67.638	ENSCAPG00000010501	CRNKL1	96	69.463	Cavia_aperea
ENSCING00000002709	-	99	68.129	ENSCPOG00000004418	CRNKL1	96	69.789	Cavia_porcellus
ENSCING00000002709	-	99	68.567	ENSCCAG00000027037	CRNKL1	96	69.940	Cebus_capucinus
ENSCING00000002709	-	99	68.421	ENSCATG00000034247	CRNKL1	96	69.940	Cercocebus_atys
ENSCING00000002709	-	99	67.836	ENSCLAG00000013859	CRNKL1	96	69.486	Chinchilla_lanigera
ENSCING00000002709	-	99	68.421	ENSCSAG00000011434	CRNKL1	96	69.940	Chlorocebus_sabaeus
ENSCING00000002709	-	99	68.088	ENSCHOG00000006371	CRNKL1	81	69.486	Choloepus_hoffmanni
ENSCING00000002709	-	99	67.737	ENSCPBG00000023501	CRNKL1	97	69.127	Chrysemys_picta_bellii
ENSCING00000002709	-	99	68.421	ENSCANG00000038789	CRNKL1	96	69.940	Colobus_angolensis_palliatus
ENSCING00000002709	-	99	68.129	ENSCGRG00001000687	-	96	69.789	Cricetulus_griseus_chok1gshd
ENSCING00000002709	-	99	68.129	ENSCGRG00001001115	-	96	69.789	Cricetulus_griseus_chok1gshd
ENSCING00000002709	-	99	68.129	ENSCGRG00000007854	Crnkl1	96	69.789	Cricetulus_griseus_crigri
ENSCING00000002709	-	99	67.153	ENSCSEG00000005594	crnkl1	84	68.825	Cynoglossus_semilaevis
ENSCING00000002709	-	97	68.825	ENSCVAG00000015172	crnkl1	89	68.825	Cyprinodon_variegatus
ENSCING00000002709	-	97	68.477	ENSDARG00000007901	crnkl1	88	68.524	Danio_rerio
ENSCING00000002709	-	99	68.343	ENSDNOG00000016226	CRNKL1	92	69.789	Dasypus_novemcinctus
ENSCING00000002709	-	99	66.812	ENSDORG00000000394	-	96	68.413	Dipodomys_ordii
ENSCING00000002709	-	98	64.978	ENSDORG00000023724	-	98	65.315	Dipodomys_ordii
ENSCING00000002709	-	98	64.732	ENSDORG00000030174	-	99	65.067	Dipodomys_ordii
ENSCING00000002709	-	97	65.030	FBgn0000377	crn	96	65.127	Drosophila_melanogaster
ENSCING00000002709	-	99	59.172	ENSETEG00000003711	CRNKL1	81	60.272	Echinops_telfairi
ENSCING00000002709	-	99	52.104	ENSEBUG00000013461	crnkl1	93	50.528	Eptatretus_burgeri
ENSCING00000002709	-	99	68.195	ENSEASG00005002072	CRNKL1	96	69.637	Equus_asinus_asinus
ENSCING00000002709	-	99	68.195	ENSECAG00000022215	CRNKL1	96	69.637	Equus_caballus
ENSCING00000002709	-	99	66.176	ENSEEUG00000000413	CRNKL1	89	67.523	Erinaceus_europaeus
ENSCING00000002709	-	97	68.413	ENSELUG00000015424	crnkl1	95	68.413	Esox_lucius
ENSCING00000002709	-	99	67.982	ENSFCAG00000000714	CRNKL1	96	69.637	Felis_catus
ENSCING00000002709	-	96	67.375	ENSFALG00000004611	CRNKL1	97	67.994	Ficedula_albicollis
ENSCING00000002709	-	99	68.047	ENSFDAG00000000604	CRNKL1	96	69.486	Fukomys_damarensis
ENSCING00000002709	-	98	67.356	ENSFHEG00000013163	crnkl1	86	68.223	Fundulus_heteroclitus
ENSCING00000002709	-	97	68.722	ENSGMOG00000007609	crnkl1	92	68.722	Gadus_morhua
ENSCING00000002709	-	99	67.055	ENSGALG00000008429	CRNKL1	97	68.675	Gallus_gallus
ENSCING00000002709	-	97	68.722	ENSGAFG00000014249	crnkl1	87	68.722	Gambusia_affinis
ENSCING00000002709	-	99	67.299	ENSGACG00000011852	crnkl1	89	68.271	Gasterosteus_aculeatus
ENSCING00000002709	-	95	67.851	ENSGAGG00000021233	CRNKL1	97	69.174	Gopherus_agassizii
ENSCING00000002709	-	99	68.824	ENSGGOG00000014176	CRNKL1	96	70.091	Gorilla_gorilla
ENSCING00000002709	-	99	66.429	ENSHBUG00000005246	crnkl1	88	68.976	Haplochromis_burtoni
ENSCING00000002709	-	99	67.899	ENSHGLG00000010856	CRNKL1	96	69.335	Heterocephalus_glaber_female
ENSCING00000002709	-	99	67.899	ENSHGLG00100011521	CRNKL1	96	69.335	Heterocephalus_glaber_male
ENSCING00000002709	-	97	67.771	ENSHCOG00000006420	crnkl1	95	67.771	Hippocampus_comes
ENSCING00000002709	-	94	68.624	ENSIPUG00000006751	crnkl1	90	68.624	Ictalurus_punctatus
ENSCING00000002709	-	96	59.056	ENSIPUG00000006836	-	97	58.788	Ictalurus_punctatus
ENSCING00000002709	-	93	53.543	ENSIPUG00000000315	-	99	53.543	Ictalurus_punctatus
ENSCING00000002709	-	99	67.836	ENSSTOG00000014747	CRNKL1	96	69.486	Ictidomys_tridecemlineatus
ENSCING00000002709	-	99	66.571	ENSJJAG00000016926	Crnkl1	96	67.994	Jaculus_jaculus
ENSCING00000002709	-	99	67.836	ENSKMAG00000003620	crnkl1	85	69.127	Kryptolebias_marmoratus
ENSCING00000002709	-	97	55.887	ENSLBEG00000003543	crnkl1	89	55.887	Labrus_bergylta
ENSCING00000002709	-	99	68.732	ENSLACG00000001129	CRNKL1	97	69.578	Latimeria_chalumnae
ENSCING00000002709	-	97	70.030	ENSLOCG00000016889	crnkl1	93	69.715	Lepisosteus_oculatus
ENSCING00000002709	-	99	67.299	ENSLAFG00000004512	CRNKL1	96	69.532	Loxodonta_africana
ENSCING00000002709	-	99	68.421	ENSMFAG00000039893	CRNKL1	96	69.940	Macaca_fascicularis
ENSCING00000002709	-	99	68.421	ENSMMUG00000007709	CRNKL1	96	69.940	Macaca_mulatta
ENSCING00000002709	-	99	68.421	ENSMNEG00000037490	CRNKL1	96	69.940	Macaca_nemestrina
ENSCING00000002709	-	99	68.421	ENSMLEG00000034885	CRNKL1	96	69.940	Mandrillus_leucophaeus
ENSCING00000002709	-	98	68.593	ENSMAMG00000008757	crnkl1	88	69.277	Mastacembelus_armatus
ENSCING00000002709	-	99	66.429	ENSMZEG00005022345	crnkl1	88	68.976	Maylandia_zebra
ENSCING00000002709	-	99	67.055	ENSMGAG00000003452	CRNKL1	91	68.271	Meleagris_gallopavo
ENSCING00000002709	-	99	68.129	ENSMAUG00000020764	Crnkl1	96	69.789	Mesocricetus_auratus
ENSCING00000002709	-	99	68.129	ENSMICG00000006048	CRNKL1	96	69.789	Microcebus_murinus
ENSCING00000002709	-	99	61.638	ENSMOCG00000000681	-	96	63.056	Microtus_ochrogaster
ENSCING00000002709	-	96	50.528	ENSMOCG00000004179	-	94	50.602	Microtus_ochrogaster
ENSCING00000002709	-	92	68.246	ENSMMOG00000017601	crnkl1	97	68.246	Mola_mola
ENSCING00000002709	-	99	64.897	ENSMODG00000010857	-	96	66.314	Monodelphis_domestica
ENSCING00000002709	-	99	65.562	ENSMODG00000005961	-	96	67.262	Monodelphis_domestica
ENSCING00000002709	-	99	49.927	ENSMALG00000011211	crnkl1	87	56.006	Monopterus_albus
ENSCING00000002709	-	99	67.836	MGP_CAROLIEiJ_G0024394	Crnkl1	96	69.335	Mus_caroli
ENSCING00000002709	-	99	67.690	ENSMUSG00000001767	Crnkl1	96	69.335	Mus_musculus
ENSCING00000002709	-	99	67.251	MGP_PahariEiJ_G0025838	Crnkl1	96	68.882	Mus_pahari
ENSCING00000002709	-	99	67.690	MGP_SPRETEiJ_G0025312	Crnkl1	96	69.335	Mus_spretus
ENSCING00000002709	-	99	67.982	ENSMPUG00000001226	CRNKL1	96	69.637	Mustela_putorius_furo
ENSCING00000002709	-	99	67.695	ENSMLUG00000016513	CRNKL1	86	69.080	Myotis_lucifugus
ENSCING00000002709	-	99	66.428	ENSNGAG00000023097	Crnkl1	96	68.000	Nannospalax_galili
ENSCING00000002709	-	99	67.789	ENSNBRG00000007867	crnkl1	87	69.127	Neolamprologus_brichardi
ENSCING00000002709	-	99	65.789	ENSNLEG00000009862	CRNKL1	96	66.918	Nomascus_leucogenys
ENSCING00000002709	-	99	65.192	ENSMEUG00000002361	-	96	66.214	Notamacropus_eugenii
ENSCING00000002709	-	98	67.761	ENSMEUG00000012167	-	97	69.278	Notamacropus_eugenii
ENSCING00000002709	-	75	48.643	ENSOPRG00000009242	-	61	48.062	Ochotona_princeps
ENSCING00000002709	-	99	67.836	ENSODEG00000012175	CRNKL1	96	69.486	Octodon_degus
ENSCING00000002709	-	99	68.235	ENSONIG00000018728	crnkl1	88	69.277	Oreochromis_niloticus
ENSCING00000002709	-	96	68.079	ENSOCUG00000015484	CRNKL1	80	69.277	Oryctolagus_cuniculus
ENSCING00000002709	-	99	67.982	ENSORLG00000017240	crnkl1	94	66.369	Oryzias_latipes
ENSCING00000002709	-	99	67.638	ENSORLG00020001742	crnkl1	89	69.127	Oryzias_latipes_hni
ENSCING00000002709	-	99	68.129	ENSORLG00015019564	crnkl1	89	69.277	Oryzias_latipes_hsok
ENSCING00000002709	-	99	67.779	ENSOMEG00000019895	crnkl1	89	69.127	Oryzias_melastigma
ENSCING00000002709	-	99	68.343	ENSOGAG00000011544	CRNKL1	96	69.789	Otolemur_garnettii
ENSCING00000002709	-	99	68.879	ENSOARG00000002150	CRNKL1	86	69.940	Ovis_aries
ENSCING00000002709	-	99	68.088	ENSPPAG00000027847	CRNKL1	80	69.335	Pan_paniscus
ENSCING00000002709	-	99	67.982	ENSPPRG00000001955	CRNKL1	96	69.637	Panthera_pardus
ENSCING00000002709	-	99	67.982	ENSPTIG00000007393	CRNKL1	96	69.637	Panthera_tigris_altaica
ENSCING00000002709	-	99	68.567	ENSPTRG00000030609	CRNKL1	96	70.091	Pan_troglodytes
ENSCING00000002709	-	99	68.421	ENSPANG00000017420	CRNKL1	96	69.940	Papio_anubis
ENSCING00000002709	-	97	66.366	ENSPKIG00000017093	crnkl1	87	66.417	Paramormyrops_kingsleyae
ENSCING00000002709	-	99	67.251	ENSPSIG00000012705	CRNKL1	97	68.318	Pelodiscus_sinensis
ENSCING00000002709	-	99	64.464	ENSPMGG00000006263	crnkl1	94	65.663	Periophthalmus_magnuspinnatus
ENSCING00000002709	-	99	67.836	ENSPEMG00000000073	-	96	69.486	Peromyscus_maniculatus_bairdii
ENSCING00000002709	-	100	66.909	ENSPMAG00000002250	crnkl1	96	68.619	Petromyzon_marinus
ENSCING00000002709	-	99	66.864	ENSPCIG00000025825	CRNKL1	92	68.278	Phascolarctos_cinereus
ENSCING00000002709	-	97	68.524	ENSPFOG00000005102	crnkl1	90	68.524	Poecilia_formosa
ENSCING00000002709	-	97	68.571	ENSPLAG00000007288	crnkl1	86	68.571	Poecilia_latipinna
ENSCING00000002709	-	97	68.675	ENSPMEG00000008865	crnkl1	90	68.675	Poecilia_mexicana
ENSCING00000002709	-	97	68.524	ENSPREG00000012615	crnkl1	89	68.524	Poecilia_reticulata
ENSCING00000002709	-	99	68.676	ENSPPYG00000010747	CRNKL1	78	69.940	Pongo_abelii
ENSCING00000002709	-	99	64.559	ENSPCAG00000003296	CRNKL1	82	65.710	Procavia_capensis
ENSCING00000002709	-	99	67.353	ENSPCOG00000017608	CRNKL1	80	68.731	Propithecus_coquereli
ENSCING00000002709	-	99	68.235	ENSPVAG00000006207	CRNKL1	80	69.637	Pteropus_vampyrus
ENSCING00000002709	-	99	66.286	ENSPNYG00000001977	crnkl1	88	68.825	Pundamilia_nyererei
ENSCING00000002709	-	98	68.955	ENSPNAG00000001507	crnkl1	96	66.021	Pygocentrus_nattereri
ENSCING00000002709	-	99	67.690	ENSRNOG00000010587	Crnkl1	96	69.335	Rattus_norvegicus
ENSCING00000002709	-	99	67.398	ENSRNOG00000040045	Crnkl1	96	69.033	Rattus_norvegicus
ENSCING00000002709	-	99	68.421	ENSRBIG00000031770	CRNKL1	96	69.940	Rhinopithecus_bieti
ENSCING00000002709	-	99	68.421	ENSRROG00000040450	CRNKL1	96	69.940	Rhinopithecus_roxellana
ENSCING00000002709	-	93	37.683	YLR117C	CLF1	98	37.775	Saccharomyces_cerevisiae
ENSCING00000002709	-	99	68.275	ENSSBOG00000029672	CRNKL1	96	69.789	Saimiri_boliviensis_boliviensis
ENSCING00000002709	-	96	60.152	ENSSHAG00000011199	CRNKL1	99	60.550	Sarcophilus_harrisii
ENSCING00000002709	-	97	68.477	ENSSFOG00015000946	crnkl1	86	68.524	Scleropages_formosus
ENSCING00000002709	-	99	66.569	ENSSMAG00000007933	crnkl1	86	67.970	Scophthalmus_maximus
ENSCING00000002709	-	98	63.244	ENSSDUG00000012625	crnkl1	85	63.759	Seriola_dumerili
ENSCING00000002709	-	98	69.001	ENSSLDG00000021413	crnkl1	86	69.578	Seriola_lalandi_dorsalis
ENSCING00000002709	-	99	67.899	ENSSARG00000006443	CRNKL1	79	69.335	Sorex_araneus
ENSCING00000002709	-	99	67.883	ENSSPUG00000005254	CRNKL1	97	69.127	Sphenodon_punctatus
ENSCING00000002709	-	99	67.489	ENSSPAG00000016150	crnkl1	86	68.976	Stegastes_partitus
ENSCING00000002709	-	99	68.228	ENSSSCG00000038587	CRNKL1	96	69.637	Sus_scrofa
ENSCING00000002709	-	98	67.359	ENSTGUG00000007645	CRNKL1	95	68.271	Taeniopygia_guttata
ENSCING00000002709	-	98	65.075	ENSTRUG00000015417	crnkl1	88	65.512	Takifugu_rubripes
ENSCING00000002709	-	97	69.323	ENSTNIG00000010710	crnkl1	96	69.323	Tetraodon_nigroviridis
ENSCING00000002709	-	91	68.640	ENSTBEG00000001304	CRNKL1	80	68.618	Tupaia_belangeri
ENSCING00000002709	-	91	65.760	ENSTTRG00000000484	CRNKL1	79	65.854	Tursiops_truncatus
ENSCING00000002709	-	99	67.982	ENSUAMG00000018586	CRNKL1	96	69.637	Ursus_americanus
ENSCING00000002709	-	99	67.982	ENSUMAG00000024957	CRNKL1	97	69.048	Ursus_maritimus
ENSCING00000002709	-	98	68.452	ENSVVUG00000012559	CRNKL1	79	69.637	Vulpes_vulpes
ENSCING00000002709	-	100	67.977	ENSXETG00000009698	crnkl1	97	69.219	Xenopus_tropicalis
ENSCING00000002709	-	97	67.820	ENSXCOG00000000824	crnkl1	89	67.820	Xiphophorus_couchianus
ENSCING00000002709	-	97	68.675	ENSXMAG00000006896	crnkl1	89	68.675	Xiphophorus_maculatus