EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002715 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 10263 bases
Position: chrHT000096.1:92987-103249
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005538	Suf	PF05843.14	3.4e-05	1	1
ENSCINP00000005538	S1	PF00575.23	5e-28	1	2
ENSCINP00000005538	S1	PF00575.23	5e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005538	-	5269	-	ENSCINP00000005538	1742 (aa)	-	F6UDJ0

Gene Model

Click here to download ENSCING00000002715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002715's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002715	-	99	44.867	ENSG00000148843	PDCD11	96	44.867	Homo_sapiens
ENSCING00000002715	-	99	36.203	ENSAMEG00000017935	PDCD11	89	44.487	Ailuropoda_melanoleuca
ENSCING00000002715	-	84	41.825	ENSAPLG00000010301	PDCD11	83	36.336	Anas_platyrhynchos
ENSCING00000002715	-	99	44.867	ENSANAG00000034576	PDCD11	99	44.867	Aotus_nancymaae
ENSCING00000002715	-	78	39.117	ENSACLG00000018236	pdcd11	86	43.077	Astatotilapia_calliptera
ENSCING00000002715	-	94	44.106	ENSBTAG00000009715	PDCD11	99	44.106	Bos_taurus
ENSCING00000002715	-	95	44.106	ENSCJAG00000018257	PDCD11	96	44.106	Callithrix_jacchus
ENSCING00000002715	-	94	44.487	ENSCAFG00000010411	PDCD11	96	44.487	Canis_familiaris
ENSCING00000002715	-	95	44.487	ENSCAFG00020010369	PDCD11	86	44.487	Canis_lupus_dingo
ENSCING00000002715	-	94	44.487	ENSCHIG00000025218	PDCD11	99	44.487	Capra_hircus
ENSCING00000002715	-	96	44.106	ENSTSYG00000033423	PDCD11	89	44.106	Carlito_syrichta
ENSCING00000002715	-	74	44.106	ENSCAPG00000005386	PDCD11	89	44.106	Cavia_aperea
ENSCING00000002715	-	94	44.106	ENSCPOG00000010957	PDCD11	97	44.106	Cavia_porcellus
ENSCING00000002715	-	95	44.487	ENSCCAG00000018950	PDCD11	86	44.487	Cebus_capucinus
ENSCING00000002715	-	99	45.247	ENSCATG00000044331	PDCD11	96	45.247	Cercocebus_atys
ENSCING00000002715	-	99	45.247	ENSCSAG00000005346	PDCD11	96	45.247	Chlorocebus_sabaeus
ENSCING00000002715	-	64	39.535	ENSCHOG00000004796	PDCD11	67	39.535	Choloepus_hoffmanni
ENSCING00000002715	-	95	45.247	ENSCANG00000043300	PDCD11	96	45.247	Colobus_angolensis_palliatus
ENSCING00000002715	-	95	45.247	ENSCGRG00001006458	Pdcd11	90	45.247	Cricetulus_griseus_chok1gshd
ENSCING00000002715	-	95	45.247	ENSCGRG00000003583	Pdcd11	90	45.833	Cricetulus_griseus_crigri
ENSCING00000002715	-	89	31.561	ENSCVAG00000018903	pdcd11	94	31.389	Cyprinodon_variegatus
ENSCING00000002715	-	76	34.906	ENSDARG00000052480	pdcd11	77	35.052	Danio_rerio
ENSCING00000002715	-	99	44.867	ENSDNOG00000013838	PDCD11	86	44.867	Dasypus_novemcinctus
ENSCING00000002715	-	77	33.333	ENSETEG00000000813	PDCD11	82	33.333	Echinops_telfairi
ENSCING00000002715	-	95	44.106	ENSEASG00005015159	PDCD11	89	44.106	Equus_asinus_asinus
ENSCING00000002715	-	83	44.487	ENSEEUG00000009245	PDCD11	74	44.487	Erinaceus_europaeus
ENSCING00000002715	-	95	44.487	ENSFCAG00000002384	PDCD11	86	44.487	Felis_catus
ENSCING00000002715	-	69	32.422	ENSFHEG00000022997	pdcd11	77	43.726	Fundulus_heteroclitus
ENSCING00000002715	-	85	30.163	ENSGMOG00000004186	pdcd11	82	30.178	Gadus_morhua
ENSCING00000002715	-	86	44.151	ENSGAFG00000012806	pdcd11	86	44.151	Gambusia_affinis
ENSCING00000002715	-	99	44.487	ENSGGOG00000011621	PDCD11	96	44.487	Gorilla_gorilla
ENSCING00000002715	-	55	32.567	ENSIPUG00000015102	pdcd11	88	35.751	Ictalurus_punctatus
ENSCING00000002715	-	95	44.867	ENSSTOG00000014553	PDCD11	90	44.867	Ictidomys_tridecemlineatus
ENSCING00000002715	-	94	44.106	ENSJJAG00000015523	Pdcd11	90	44.106	Jaculus_jaculus
ENSCING00000002715	-	88	39.462	ENSLOCG00000011818	pdcd11	96	39.437	Lepisosteus_oculatus
ENSCING00000002715	-	95	44.867	ENSMFAG00000044058	PDCD11	96	44.867	Macaca_fascicularis
ENSCING00000002715	-	95	45.247	ENSMMUG00000007058	PDCD11	96	45.247	Macaca_mulatta
ENSCING00000002715	-	95	45.247	ENSMNEG00000040726	PDCD11	96	45.247	Macaca_nemestrina
ENSCING00000002715	-	95	45.247	ENSMLEG00000040978	PDCD11	88	45.247	Mandrillus_leucophaeus
ENSCING00000002715	-	94	42.966	ENSMGAG00000010482	PDCD11	93	37.538	Meleagris_gallopavo
ENSCING00000002715	-	68	45.627	ENSMAUG00000014924	Pdcd11	73	45.627	Mesocricetus_auratus
ENSCING00000002715	-	99	45.247	ENSMICG00000012421	PDCD11	87	45.247	Microcebus_murinus
ENSCING00000002715	-	95	44.487	ENSMOCG00000021792	Pdcd11	87	44.487	Microtus_ochrogaster
ENSCING00000002715	-	88	32.941	ENSMMOG00000007572	pdcd11	92	32.941	Mola_mola
ENSCING00000002715	-	87	44.867	ENSMODG00000011077	PDCD11	90	37.430	Monodelphis_domestica
ENSCING00000002715	-	71	31.163	ENSMALG00000003859	pdcd11	69	30.698	Monopterus_albus
ENSCING00000002715	-	92	33.704	MGP_CAROLIEiJ_G0023050	Pdcd11	96	35.784	Mus_caroli
ENSCING00000002715	-	87	45.247	MGP_PahariEiJ_G0014540	Pdcd11	96	35.784	Mus_pahari
ENSCING00000002715	-	94	44.487	ENSMPUG00000016829	PDCD11	86	44.487	Mustela_putorius_furo
ENSCING00000002715	-	94	44.487	ENSMLUG00000004997	PDCD11	85	44.487	Myotis_lucifugus
ENSCING00000002715	-	94	44.106	ENSNGAG00000018143	Pdcd11	99	44.106	Nannospalax_galili
ENSCING00000002715	-	52	44.059	ENSNBRG00000021596	pdcd11	89	30.340	Neolamprologus_brichardi
ENSCING00000002715	-	95	44.867	ENSNLEG00000026700	PDCD11	96	44.867	Nomascus_leucogenys
ENSCING00000002715	-	87	44.867	ENSOPRG00000010593	PDCD11	80	44.867	Ochotona_princeps
ENSCING00000002715	-	95	44.867	ENSOCUG00000006312	PDCD11	96	44.867	Oryctolagus_cuniculus
ENSCING00000002715	-	95	45.076	ENSOGAG00000008683	PDCD11	86	45.076	Otolemur_garnettii
ENSCING00000002715	-	95	44.487	ENSOARG00000003719	PDCD11	99	44.487	Ovis_aries
ENSCING00000002715	-	99	44.867	ENSPPAG00000024593	PDCD11	96	44.867	Pan_paniscus
ENSCING00000002715	-	95	44.106	ENSPPRG00000015133	PDCD11	86	44.106	Panthera_pardus
ENSCING00000002715	-	95	44.487	ENSPTIG00000011433	PDCD11	96	44.487	Panthera_tigris_altaica
ENSCING00000002715	-	99	44.867	ENSPTRG00000002911	PDCD11	96	44.867	Pan_troglodytes
ENSCING00000002715	-	99	45.247	ENSPANG00000020959	PDCD11	96	45.247	Papio_anubis
ENSCING00000002715	-	57	34.709	ENSPMGG00000007289	pdcd11	89	34.951	Periophthalmus_magnuspinnatus
ENSCING00000002715	-	94	44.867	ENSPEMG00000010315	Pdcd11	99	44.867	Peromyscus_maniculatus_bairdii
ENSCING00000002715	-	95	42.205	ENSPMAG00000003098	pdcd11	86	42.205	Petromyzon_marinus
ENSCING00000002715	-	95	44.106	ENSPCIG00000001118	PDCD11	89	44.106	Phascolarctos_cinereus
ENSCING00000002715	-	80	36.145	ENSPLAG00000014494	pdcd11	85	36.527	Poecilia_latipinna
ENSCING00000002715	-	57	36.963	ENSPMEG00000018177	pdcd11	80	30.593	Poecilia_mexicana
ENSCING00000002715	-	99	44.867	ENSPPYG00000002621	PDCD11	96	44.867	Pongo_abelii
ENSCING00000002715	-	96	43.726	ENSPVAG00000004176	PDCD11	90	43.726	Pteropus_vampyrus
ENSCING00000002715	-	82	41.065	ENSPNAG00000017225	pdcd11	91	33.152	Pygocentrus_nattereri
ENSCING00000002715	-	92	34.066	ENSRNOG00000020304	Pdcd11	86	44.487	Rattus_norvegicus
ENSCING00000002715	-	95	44.610	ENSRBIG00000011889	PDCD11	96	44.610	Rhinopithecus_bieti
ENSCING00000002715	-	95	45.247	ENSRROG00000030483	PDCD11	96	45.247	Rhinopithecus_roxellana
ENSCING00000002715	-	95	44.867	ENSSBOG00000030308	PDCD11	96	44.867	Saimiri_boliviensis_boliviensis
ENSCING00000002715	-	95	45.627	ENSSHAG00000018258	PDCD11	96	45.627	Sarcophilus_harrisii
ENSCING00000002715	-	91	32.616	ENSSFOG00015003881	pdcd11	88	34.615	Scleropages_formosus
ENSCING00000002715	-	87	31.150	ENSSMAG00000006612	pdcd11	84	31.793	Scophthalmus_maximus
ENSCING00000002715	-	76	34.911	ENSSDUG00000021302	pdcd11	95	31.544	Seriola_dumerili
ENSCING00000002715	-	96	44.487	ENSSSCG00000010599	PDCD11	89	44.487	Sus_scrofa
ENSCING00000002715	-	95	43.726	ENSTBEG00000001893	PDCD11	86	43.726	Tupaia_belangeri
ENSCING00000002715	-	87	44.487	ENSTTRG00000003356	PDCD11	82	44.487	Tursiops_truncatus
ENSCING00000002715	-	96	39.514	ENSUAMG00000018015	PDCD11	93	39.514	Ursus_americanus
ENSCING00000002715	-	99	36.709	ENSUMAG00000023567	PDCD11	93	39.514	Ursus_maritimus
ENSCING00000002715	-	65	39.474	ENSVPAG00000007405	PDCD11	58	39.474	Vicugna_pacos
ENSCING00000002715	-	94	43.939	ENSXETG00000009482	pdcd11	90	38.509	Xenopus_tropicalis
ENSCING00000002715	-	87	36.686	ENSXCOG00000012420	pdcd11	95	36.471	Xiphophorus_couchianus
ENSCING00000002715	-	86	36.413	ENSXMAG00000004638	pdcd11	99	34.274	Xiphophorus_maculatus