EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002729 (Gene tree)
Gene ID: 100178939
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4353 bases
Position: chr1:78718-83070
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005569	Mpp10	PF04006.12	2.3e-125	1	2
ENSCINP00000005569	Mpp10	PF04006.12	2.3e-125	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005569	-	1815	-	ENSCINP00000005569	579 (aa)	-	F6TQ12

Gene Model

Click here to download ENSCING00000002729's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002729	-	50	50.502	ENSG00000124383	MPHOSPH10	83	50.505	Homo_sapiens
ENSCING00000002729	-	90	50.685	ENSAPOG00000001943	mphosph10	82	50.336	Acanthochromis_polyacanthus
ENSCING00000002729	-	98	35.435	ENSAMEG00000015372	MPHOSPH10	83	49.158	Ailuropoda_melanoleuca
ENSCING00000002729	-	91	47.157	ENSAOCG00000005473	mphosph10	83	49.502	Amphiprion_ocellaris
ENSCING00000002729	-	90	50.685	ENSAPEG00000018904	mphosph10	81	49.834	Amphiprion_percula
ENSCING00000002729	-	89	47.176	ENSATEG00000011131	mphosph10	81	48.837	Anabas_testudineus
ENSCING00000002729	-	50	50.502	ENSANAG00000025905	MPHOSPH10	83	50.505	Aotus_nancymaae
ENSCING00000002729	-	71	40.167	ENSACLG00000025421	mphosph10	83	50.000	Astatotilapia_calliptera
ENSCING00000002729	-	50	45.545	ENSAMXG00000005318	mphosph10	78	45.515	Astyanax_mexicanus
ENSCING00000002729	-	92	50.167	ENSBTAG00000009854	MPHOSPH10	85	49.363	Bos_taurus
ENSCING00000002729	-	97	35.474	ENSCJAG00000019423	MPHOSPH10	82	49.832	Callithrix_jacchus
ENSCING00000002729	-	98	36.006	ENSCAFG00000010357	MPHOSPH10	95	34.992	Canis_familiaris
ENSCING00000002729	-	98	36.006	ENSCAFG00020023836	MPHOSPH10	95	34.992	Canis_lupus_dingo
ENSCING00000002729	-	92	49.833	ENSCHIG00000023646	MPHOSPH10	85	49.045	Capra_hircus
ENSCING00000002729	-	55	48.476	ENSTSYG00000012839	MPHOSPH10	86	49.367	Carlito_syrichta
ENSCING00000002729	-	57	41.221	ENSCAPG00000003922	MPHOSPH10	50	50.352	Cavia_aperea
ENSCING00000002729	-	50	44.932	ENSCCAG00000028245	-	60	44.407	Cebus_capucinus
ENSCING00000002729	-	50	50.502	ENSCCAG00000037954	-	83	50.505	Cebus_capucinus
ENSCING00000002729	-	50	50.502	ENSCATG00000034155	MPHOSPH10	83	50.505	Cercocebus_atys
ENSCING00000002729	-	98	35.429	ENSCLAG00000012756	MPHOSPH10	95	35.429	Chinchilla_lanigera
ENSCING00000002729	-	70	50.502	ENSCSAG00000015247	MPHOSPH10	83	50.505	Chlorocebus_sabaeus
ENSCING00000002729	-	69	54.438	ENSCHOG00000004385	MPHOSPH10	63	54.491	Choloepus_hoffmanni
ENSCING00000002729	-	50	46.104	ENSCPBG00000010930	MPHOSPH10	84	46.622	Chrysemys_picta_bellii
ENSCING00000002729	-	53	75.161	ENSCSAVG00000001404	-	96	76.238	Ciona_savignyi
ENSCING00000002729	-	50	50.502	ENSCANG00000043601	MPHOSPH10	83	50.505	Colobus_angolensis_palliatus
ENSCING00000002729	-	55	44.675	ENSCSEG00000001365	mphosph10	82	45.260	Cynoglossus_semilaevis
ENSCING00000002729	-	50	47.896	ENSCVAG00000015908	mphosph10	95	33.965	Cyprinodon_variegatus
ENSCING00000002729	-	50	47.419	ENSDARG00000012495	mphosph10	94	34.021	Danio_rerio
ENSCING00000002729	-	50	50.167	ENSDNOG00000034336	MPHOSPH10	83	50.168	Dasypus_novemcinctus
ENSCING00000002729	-	50	49.495	ENSDORG00000006007	Mphosph10	95	36.086	Dipodomys_ordii
ENSCING00000002729	-	50	50.502	ENSETEG00000016641	MPHOSPH10	71	50.505	Echinops_telfairi
ENSCING00000002729	-	93	34.465	ENSEBUG00000000786	mphosph10	91	32.500	Eptatretus_burgeri
ENSCING00000002729	-	98	35.639	ENSEASG00005017746	MPHOSPH10	86	49.045	Equus_asinus_asinus
ENSCING00000002729	-	96	33.587	ENSELUG00000017942	mphosph10	95	33.026	Esox_lucius
ENSCING00000002729	-	50	49.498	ENSFCAG00000026780	MPHOSPH10	85	36.336	Felis_catus
ENSCING00000002729	-	73	36.008	ENSFALG00000012524	MPHOSPH10	79	47.667	Ficedula_albicollis
ENSCING00000002729	-	98	34.347	ENSFDAG00000007673	MPHOSPH10	95	34.399	Fukomys_damarensis
ENSCING00000002729	-	50	49.502	ENSFHEG00000018862	mphosph10	94	42.402	Fundulus_heteroclitus
ENSCING00000002729	-	91	36.833	ENSGMOG00000012875	mphosph10	94	35.833	Gadus_morhua
ENSCING00000002729	-	50	45.695	ENSGALG00000003906	MPHOSPH10	95	34.568	Gallus_gallus
ENSCING00000002729	-	50	47.682	ENSGAFG00000012708	mphosph10	56	42.929	Gambusia_affinis
ENSCING00000002729	-	91	34.762	ENSGACG00000015478	mphosph10	86	48.718	Gasterosteus_aculeatus
ENSCING00000002729	-	50	50.502	ENSGGOG00000003905	MPHOSPH10	83	50.505	Gorilla_gorilla
ENSCING00000002729	-	71	40.167	ENSHBUG00000023423	mphosph10	83	50.000	Haplochromis_burtoni
ENSCING00000002729	-	70	37.744	ENSIPUG00000023294	mphosph10	94	34.191	Ictalurus_punctatus
ENSCING00000002729	-	98	35.886	ENSSTOG00000004999	MPHOSPH10	95	35.015	Ictidomys_tridecemlineatus
ENSCING00000002729	-	98	35.489	ENSJJAG00000015017	Mphosph10	95	34.901	Jaculus_jaculus
ENSCING00000002729	-	95	44.214	ENSKMAG00000001701	mphosph10	81	49.329	Kryptolebias_marmoratus
ENSCING00000002729	-	89	49.164	ENSLBEG00000002748	mphosph10	95	35.358	Labrus_bergylta
ENSCING00000002729	-	95	35.514	ENSLACG00000018472	MPHOSPH10	94	35.258	Latimeria_chalumnae
ENSCING00000002729	-	93	47.170	ENSLOCG00000013681	mphosph10	85	47.302	Lepisosteus_oculatus
ENSCING00000002729	-	81	49.835	ENSLAFG00000011341	MPHOSPH10	83	49.834	Loxodonta_africana
ENSCING00000002729	-	50	50.502	ENSMFAG00000039444	MPHOSPH10	83	50.505	Macaca_fascicularis
ENSCING00000002729	-	50	50.502	ENSMMUG00000008397	MPHOSPH10	72	50.000	Macaca_mulatta
ENSCING00000002729	-	50	50.502	ENSMNEG00000043591	MPHOSPH10	83	50.505	Macaca_nemestrina
ENSCING00000002729	-	98	36.645	ENSMLEG00000031602	MPHOSPH10	95	37.799	Mandrillus_leucophaeus
ENSCING00000002729	-	81	47.841	ENSMAMG00000001587	mphosph10	81	49.662	Mastacembelus_armatus
ENSCING00000002729	-	71	40.167	ENSMZEG00005027982	mphosph10	83	50.000	Maylandia_zebra
ENSCING00000002729	-	50	46.358	ENSMGAG00000004841	MPHOSPH10	85	47.667	Meleagris_gallopavo
ENSCING00000002729	-	97	36.391	ENSMAUG00000012089	Mphosph10	95	36.682	Mesocricetus_auratus
ENSCING00000002729	-	98	36.336	ENSMICG00000036069	MPHOSPH10	83	49.495	Microcebus_murinus
ENSCING00000002729	-	97	33.582	ENSMODG00000011803	MPHOSPH10	82	48.485	Monodelphis_domestica
ENSCING00000002729	-	78	48.966	ENSMALG00000017150	mphosph10	94	42.462	Monopterus_albus
ENSCING00000002729	-	50	50.336	ENSMUSG00000030521	Mphosph10	83	50.338	Mus_musculus
ENSCING00000002729	-	50	50.336	MGP_SPRETEiJ_G0030931	Mphosph10	83	50.338	Mus_spretus
ENSCING00000002729	-	98	35.928	ENSMPUG00000011089	MPHOSPH10	95	35.769	Mustela_putorius_furo
ENSCING00000002729	-	71	39.615	ENSNBRG00000016697	mphosph10	94	34.537	Neolamprologus_brichardi
ENSCING00000002729	-	50	50.502	ENSNLEG00000010266	MPHOSPH10	83	50.505	Nomascus_leucogenys
ENSCING00000002729	-	75	47.500	ENSMEUG00000004024	MPHOSPH10	75	47.500	Notamacropus_eugenii
ENSCING00000002729	-	78	37.327	ENSOPRG00000001060	MPHOSPH10	74	37.179	Ochotona_princeps
ENSCING00000002729	-	50	50.167	ENSODEG00000013751	-	95	34.947	Octodon_degus
ENSCING00000002729	-	50	45.955	ENSONIG00000002999	mphosph10	82	48.845	Oreochromis_niloticus
ENSCING00000002729	-	98	35.392	ENSOCUG00000025115	MPHOSPH10	95	35.881	Oryctolagus_cuniculus
ENSCING00000002729	-	90	48.505	ENSORLG00000005840	mphosph10	81	46.622	Oryzias_latipes
ENSCING00000002729	-	95	34.446	ENSORLG00020014361	mphosph10	81	46.622	Oryzias_latipes_hni
ENSCING00000002729	-	70	40.043	ENSORLG00015013001	mphosph10	80	38.528	Oryzias_latipes_hsok
ENSCING00000002729	-	90	46.104	ENSOMEG00000018510	mphosph10	94	34.954	Oryzias_melastigma
ENSCING00000002729	-	50	50.502	ENSPPAG00000031855	MPHOSPH10	83	50.505	Pan_paniscus
ENSCING00000002729	-	50	49.498	ENSPPRG00000003464	MPHOSPH10	95	35.769	Panthera_pardus
ENSCING00000002729	-	50	49.498	ENSPTIG00000016872	MPHOSPH10	95	35.976	Panthera_tigris_altaica
ENSCING00000002729	-	50	50.502	ENSPTRG00000012045	MPHOSPH10	83	50.505	Pan_troglodytes
ENSCING00000002729	-	50	50.502	ENSPANG00000020408	MPHOSPH10	83	50.505	Papio_anubis
ENSCING00000002729	-	90	47.213	ENSPKIG00000016578	mphosph10	80	47.841	Paramormyrops_kingsleyae
ENSCING00000002729	-	50	44.918	ENSPSIG00000017642	MPHOSPH10	82	48.505	Pelodiscus_sinensis
ENSCING00000002729	-	90	47.855	ENSPMGG00000023489	mphosph10	92	35.090	Periophthalmus_magnuspinnatus
ENSCING00000002729	-	61	31.649	ENSPMAG00000006886	mphosph10	77	34.459	Petromyzon_marinus
ENSCING00000002729	-	50	47.297	ENSPCIG00000027286	MPHOSPH10	93	35.194	Phascolarctos_cinereus
ENSCING00000002729	-	50	47.351	ENSPFOG00000004797	mphosph10	94	42.211	Poecilia_formosa
ENSCING00000002729	-	50	47.351	ENSPLAG00000007463	mphosph10	94	42.211	Poecilia_latipinna
ENSCING00000002729	-	50	47.351	ENSPMEG00000012687	mphosph10	94	42.462	Poecilia_mexicana
ENSCING00000002729	-	50	47.682	ENSPREG00000022655	mphosph10	56	42.532	Poecilia_reticulata
ENSCING00000002729	-	50	50.502	ENSPPYG00000012310	MPHOSPH10	83	50.505	Pongo_abelii
ENSCING00000002729	-	70	40.263	ENSPCOG00000011741	-	56	48.485	Propithecus_coquereli
ENSCING00000002729	-	98	36.018	ENSPCOG00000016310	-	85	49.832	Propithecus_coquereli
ENSCING00000002729	-	98	33.837	ENSPVAG00000006599	MPHOSPH10	83	46.154	Pteropus_vampyrus
ENSCING00000002729	-	71	39.958	ENSPNYG00000005297	mphosph10	83	49.664	Pundamilia_nyererei
ENSCING00000002729	-	70	38.445	ENSPNAG00000021885	mphosph10	95	33.435	Pygocentrus_nattereri
ENSCING00000002729	-	50	50.676	ENSRBIG00000032065	MPHOSPH10	83	50.680	Rhinopithecus_bieti
ENSCING00000002729	-	81	50.167	ENSRROG00000034061	MPHOSPH10	73	50.168	Rhinopithecus_roxellana
ENSCING00000002729	-	50	50.502	ENSSBOG00000022102	-	83	50.505	Saimiri_boliviensis_boliviensis
ENSCING00000002729	-	97	35.573	ENSSHAG00000016579	MPHOSPH10	95	36.335	Sarcophilus_harrisii
ENSCING00000002729	-	51	46.753	ENSSFOG00015014531	mphosph10	79	50.000	Scleropages_formosus
ENSCING00000002729	-	89	49.492	ENSSMAG00000021362	mphosph10	94	34.581	Scophthalmus_maximus
ENSCING00000002729	-	89	48.505	ENSSDUG00000007381	mphosph10	94	34.835	Seriola_dumerili
ENSCING00000002729	-	82	48.505	ENSSLDG00000021481	mphosph10	94	35.135	Seriola_lalandi_dorsalis
ENSCING00000002729	-	50	48.161	ENSSARG00000008954	MPHOSPH10	95	34.509	Sorex_araneus
ENSCING00000002729	-	52	46.605	ENSSPUG00000019130	MPHOSPH10	84	47.319	Sphenodon_punctatus
ENSCING00000002729	-	92	46.844	ENSSPAG00000007611	mphosph10	92	33.236	Stegastes_partitus
ENSCING00000002729	-	89	46.689	ENSTGUG00000005578	MPHOSPH10	82	47.475	Taeniopygia_guttata
ENSCING00000002729	-	90	49.505	ENSTRUG00000017264	mphosph10	94	35.039	Takifugu_rubripes
ENSCING00000002729	-	98	35.586	ENSUAMG00000000856	MPHOSPH10	89	50.545	Ursus_americanus
ENSCING00000002729	-	98	35.435	ENSUMAG00000023489	MPHOSPH10	83	49.158	Ursus_maritimus
ENSCING00000002729	-	98	35.801	ENSVVUG00000018901	MPHOSPH10	94	36.606	Vulpes_vulpes
ENSCING00000002729	-	92	44.068	ENSXETG00000016497	mphosph10	75	54.774	Xenopus_tropicalis
ENSCING00000002729	-	50	47.682	ENSXCOG00000003347	mphosph10	58	42.131	Xiphophorus_couchianus
ENSCING00000002729	-	50	47.682	ENSXMAG00000018298	mphosph10	58	42.169	Xiphophorus_maculatus