EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002730 (Gene tree)
Gene ID: 100184779
Gene Symbol: -
Alias: -
Full Name: splicing factor 3A subunit 3
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5597 bases
Position: chr6:1677147-1682743
Accession: 100184779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005580	SF3a60_bindingd	PF12108.8	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005580	-	1905	XM_002131099	ENSCINP00000005580	502 (aa)	XP_002131135	F6TPA2

Gene Model

Click here to download ENSCING00000002730's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002730	-	100	67.729	ENSG00000183431	SF3A3	100	67.729	Homo_sapiens
ENSCING00000002730	-	100	68.127	ENSAPOG00000015608	sf3a3	100	68.127	Acanthochromis_polyacanthus
ENSCING00000002730	-	100	67.530	ENSAMEG00000001262	SF3A3	100	67.530	Ailuropoda_melanoleuca
ENSCING00000002730	-	95	63.386	ENSACIG00000009061	sf3a3	99	63.386	Amphilophus_citrinellus
ENSCING00000002730	-	100	67.928	ENSAOCG00000013954	sf3a3	100	67.928	Amphiprion_ocellaris
ENSCING00000002730	-	100	67.928	ENSAPEG00000007297	sf3a3	100	67.928	Amphiprion_percula
ENSCING00000002730	-	100	67.928	ENSATEG00000008754	sf3a3	100	67.928	Anabas_testudineus
ENSCING00000002730	-	94	67.021	ENSAPLG00000014900	SF3A3	100	67.021	Anas_platyrhynchos
ENSCING00000002730	-	100	67.331	ENSACAG00000017058	SF3A3	100	67.331	Anolis_carolinensis
ENSCING00000002730	-	100	54.781	ENSANAG00000036903	-	100	53.386	Aotus_nancymaae
ENSCING00000002730	-	99	65.130	ENSANAG00000014878	SF3A3	100	65.331	Aotus_nancymaae
ENSCING00000002730	-	100	68.526	ENSACLG00000017977	sf3a3	100	68.526	Astatotilapia_calliptera
ENSCING00000002730	-	100	68.725	ENSAMXG00000016855	sf3a3	87	68.725	Astyanax_mexicanus
ENSCING00000002730	-	100	67.530	ENSBTAG00000007299	SF3A3	100	67.530	Bos_taurus
ENSCING00000002730	-	100	52.941	WBGene00011758	T13H5.4	100	52.941	Caenorhabditis_elegans
ENSCING00000002730	-	100	67.729	ENSCJAG00000002176	SF3A3	100	67.729	Callithrix_jacchus
ENSCING00000002730	-	100	67.530	ENSCAFG00000003222	-	100	67.530	Canis_familiaris
ENSCING00000002730	-	100	67.530	ENSCAFG00000000683	-	100	67.530	Canis_familiaris
ENSCING00000002730	-	100	67.530	ENSCAFG00020006186	SF3A3	100	67.530	Canis_lupus_dingo
ENSCING00000002730	-	100	67.530	ENSCHIG00000020638	SF3A3	100	67.530	Capra_hircus
ENSCING00000002730	-	100	61.753	ENSTSYG00000008417	SF3A3	100	61.753	Carlito_syrichta
ENSCING00000002730	-	85	46.804	ENSCAPG00000003466	SF3A3	100	44.977	Cavia_aperea
ENSCING00000002730	-	100	67.729	ENSCPOG00000008660	SF3A3	100	67.729	Cavia_porcellus
ENSCING00000002730	-	100	67.729	ENSCCAG00000033732	SF3A3	100	67.729	Cebus_capucinus
ENSCING00000002730	-	62	48.544	ENSCCAG00000034048	-	100	50.398	Cebus_capucinus
ENSCING00000002730	-	94	57.021	ENSCATG00000041660	-	100	58.723	Cercocebus_atys
ENSCING00000002730	-	100	67.729	ENSCATG00000043496	SF3A3	100	67.729	Cercocebus_atys
ENSCING00000002730	-	100	50.497	ENSCATG00000043537	-	100	50.497	Cercocebus_atys
ENSCING00000002730	-	100	67.729	ENSCLAG00000010838	SF3A3	100	67.729	Chinchilla_lanigera
ENSCING00000002730	-	95	66.457	ENSCSAG00000001120	SF3A3	100	66.667	Chlorocebus_sabaeus
ENSCING00000002730	-	79	70.899	ENSCHOG00000006849	SF3A3	79	70.899	Choloepus_hoffmanni
ENSCING00000002730	-	100	62.151	ENSCPBG00000018291	-	100	62.151	Chrysemys_picta_bellii
ENSCING00000002730	-	62	49.838	ENSCPBG00000007472	-	78	49.191	Chrysemys_picta_bellii
ENSCING00000002730	-	100	85.458	ENSCSAVG00000005063	-	100	85.458	Ciona_savignyi
ENSCING00000002730	-	100	48.207	ENSCANG00000035535	-	100	48.119	Colobus_angolensis_palliatus
ENSCING00000002730	-	100	67.729	ENSCANG00000042083	SF3A3	100	67.729	Colobus_angolensis_palliatus
ENSCING00000002730	-	100	67.729	ENSCGRG00001011320	Sf3a3	100	67.729	Cricetulus_griseus_chok1gshd
ENSCING00000002730	-	100	67.729	ENSCGRG00000012156	Sf3a3	100	67.729	Cricetulus_griseus_crigri
ENSCING00000002730	-	100	67.729	ENSCSEG00000010401	sf3a3	100	67.729	Cynoglossus_semilaevis
ENSCING00000002730	-	94	67.021	ENSCVAG00000010239	sf3a3	95	67.021	Cyprinodon_variegatus
ENSCING00000002730	-	100	68.924	ENSDARG00000100114	sf3a3	100	69.048	Danio_rerio
ENSCING00000002730	-	91	66.594	ENSDNOG00000046628	SF3A3	99	66.812	Dasypus_novemcinctus
ENSCING00000002730	-	100	67.729	ENSDORG00000008798	Sf3a3	100	67.729	Dipodomys_ordii
ENSCING00000002730	-	100	58.696	FBgn0014366	noi	100	58.696	Drosophila_melanogaster
ENSCING00000002730	-	100	66.004	ENSEBUG00000015411	sf3a3	92	66.667	Eptatretus_burgeri
ENSCING00000002730	-	100	67.530	ENSEASG00005012906	SF3A3	100	67.530	Equus_asinus_asinus
ENSCING00000002730	-	100	67.530	ENSECAG00000017333	SF3A3	100	67.530	Equus_caballus
ENSCING00000002730	-	100	68.526	ENSELUG00000010024	sf3a3	100	68.526	Esox_lucius
ENSCING00000002730	-	100	67.530	ENSFCAG00000027772	SF3A3	100	67.530	Felis_catus
ENSCING00000002730	-	100	67.331	ENSFALG00000001003	SF3A3	100	67.331	Ficedula_albicollis
ENSCING00000002730	-	100	67.729	ENSFDAG00000020908	SF3A3	100	67.729	Fukomys_damarensis
ENSCING00000002730	-	100	67.331	ENSFHEG00000019107	sf3a3	100	67.331	Fundulus_heteroclitus
ENSCING00000002730	-	100	67.729	ENSGMOG00000015540	sf3a3	100	67.729	Gadus_morhua
ENSCING00000002730	-	100	67.131	ENSGALG00000001540	SF3A3	100	67.131	Gallus_gallus
ENSCING00000002730	-	100	67.530	ENSGAFG00000002320	sf3a3	100	67.530	Gambusia_affinis
ENSCING00000002730	-	100	68.526	ENSGACG00000007842	sf3a3	100	68.526	Gasterosteus_aculeatus
ENSCING00000002730	-	100	67.131	ENSGAGG00000014980	SF3A3	100	67.131	Gopherus_agassizii
ENSCING00000002730	-	100	50.797	ENSGGOG00000022611	-	100	50.598	Gorilla_gorilla
ENSCING00000002730	-	100	67.729	ENSGGOG00000013928	SF3A3	100	67.729	Gorilla_gorilla
ENSCING00000002730	-	100	68.526	ENSHBUG00000018158	sf3a3	100	68.526	Haplochromis_burtoni
ENSCING00000002730	-	100	67.729	ENSHGLG00000012502	SF3A3	100	67.729	Heterocephalus_glaber_female
ENSCING00000002730	-	100	67.729	ENSHGLG00100010546	SF3A3	100	67.729	Heterocephalus_glaber_male
ENSCING00000002730	-	100	67.530	ENSHCOG00000015109	sf3a3	100	67.530	Hippocampus_comes
ENSCING00000002730	-	100	68.924	ENSIPUG00000011603	sf3a3	100	68.924	Ictalurus_punctatus
ENSCING00000002730	-	100	67.729	ENSSTOG00000001691	SF3A3	100	67.729	Ictidomys_tridecemlineatus
ENSCING00000002730	-	100	67.729	ENSJJAG00000012404	Sf3a3	100	67.729	Jaculus_jaculus
ENSCING00000002730	-	100	67.530	ENSKMAG00000007632	sf3a3	100	67.530	Kryptolebias_marmoratus
ENSCING00000002730	-	100	63.618	ENSLBEG00000000816	sf3a3	100	62.823	Labrus_bergylta
ENSCING00000002730	-	100	68.327	ENSLOCG00000003273	sf3a3	100	68.327	Lepisosteus_oculatus
ENSCING00000002730	-	100	58.929	ENSLAFG00000008094	SF3A3	100	58.929	Loxodonta_africana
ENSCING00000002730	-	94	54.681	ENSMFAG00000036706	-	100	56.383	Macaca_fascicularis
ENSCING00000002730	-	100	67.729	ENSMFAG00000043047	SF3A3	100	67.729	Macaca_fascicularis
ENSCING00000002730	-	100	55.179	ENSMMUG00000038820	-	100	56.773	Macaca_mulatta
ENSCING00000002730	-	100	67.729	ENSMMUG00000023199	SF3A3	100	67.729	Macaca_mulatta
ENSCING00000002730	-	94	54.681	ENSMNEG00000028686	-	100	56.170	Macaca_nemestrina
ENSCING00000002730	-	100	67.729	ENSMNEG00000044291	SF3A3	100	67.729	Macaca_nemestrina
ENSCING00000002730	-	100	67.729	ENSMLEG00000030641	SF3A3	100	67.729	Mandrillus_leucophaeus
ENSCING00000002730	-	100	50.497	ENSMLEG00000028631	-	100	50.895	Mandrillus_leucophaeus
ENSCING00000002730	-	100	58.167	ENSMLEG00000036714	-	100	59.761	Mandrillus_leucophaeus
ENSCING00000002730	-	100	68.127	ENSMAMG00000001942	sf3a3	100	68.127	Mastacembelus_armatus
ENSCING00000002730	-	100	68.526	ENSMZEG00005016987	sf3a3	100	68.526	Maylandia_zebra
ENSCING00000002730	-	100	64.484	ENSMGAG00000002875	SF3A3	100	64.484	Meleagris_gallopavo
ENSCING00000002730	-	91	65.142	ENSMICG00000026541	-	100	64.488	Microcebus_murinus
ENSCING00000002730	-	100	64.940	ENSMICG00000001485	-	100	64.940	Microcebus_murinus
ENSCING00000002730	-	100	63.147	ENSMICG00000043548	-	100	61.753	Microcebus_murinus
ENSCING00000002730	-	95	62.605	ENSMOCG00000014565	-	97	62.395	Microtus_ochrogaster
ENSCING00000002730	-	100	65.538	ENSMOCG00000019939	-	100	65.354	Microtus_ochrogaster
ENSCING00000002730	-	100	68.526	ENSMMOG00000014307	sf3a3	100	68.526	Mola_mola
ENSCING00000002730	-	100	52.519	ENSMODG00000017729	-	100	52.326	Monodelphis_domestica
ENSCING00000002730	-	100	64.143	ENSMODG00000024045	-	100	64.343	Monodelphis_domestica
ENSCING00000002730	-	100	68.127	ENSMALG00000004836	sf3a3	100	68.127	Monopterus_albus
ENSCING00000002730	-	100	67.729	MGP_CAROLIEiJ_G0026449	Sf3a3	100	67.729	Mus_caroli
ENSCING00000002730	-	100	67.729	ENSMUSG00000028902	Sf3a3	100	67.729	Mus_musculus
ENSCING00000002730	-	100	63.745	MGP_PahariEiJ_G0028780	Sf3a3	100	63.745	Mus_pahari
ENSCING00000002730	-	100	67.729	MGP_SPRETEiJ_G0027428	Sf3a3	100	67.729	Mus_spretus
ENSCING00000002730	-	100	67.530	ENSMLUG00000000991	SF3A3	100	67.530	Myotis_lucifugus
ENSCING00000002730	-	100	64.542	ENSNGAG00000018032	Sf3a3	100	64.741	Nannospalax_galili
ENSCING00000002730	-	100	63.745	ENSNLEG00000011720	SF3A3	100	63.745	Nomascus_leucogenys
ENSCING00000002730	-	100	67.729	ENSOPRG00000012785	SF3A3	100	67.729	Ochotona_princeps
ENSCING00000002730	-	100	64.940	ENSODEG00000007470	-	100	64.940	Octodon_degus
ENSCING00000002730	-	100	58.367	ENSODEG00000018393	-	100	58.765	Octodon_degus
ENSCING00000002730	-	100	64.143	ENSODEG00000006854	-	100	66.335	Octodon_degus
ENSCING00000002730	-	100	57.654	ENSODEG00000000937	-	100	58.052	Octodon_degus
ENSCING00000002730	-	87	67.661	ENSONIG00000010296	sf3a3	100	67.661	Oreochromis_niloticus
ENSCING00000002730	-	94	66.809	ENSOANG00000002473	SF3A3	100	67.021	Ornithorhynchus_anatinus
ENSCING00000002730	-	100	67.729	ENSOCUG00000005407	SF3A3	100	67.729	Oryctolagus_cuniculus
ENSCING00000002730	-	100	67.131	ENSORLG00000008175	sf3a3	100	67.131	Oryzias_latipes
ENSCING00000002730	-	100	67.131	ENSORLG00020013708	sf3a3	100	67.131	Oryzias_latipes_hni
ENSCING00000002730	-	100	67.131	ENSORLG00015004104	sf3a3	100	67.131	Oryzias_latipes_hsok
ENSCING00000002730	-	100	67.331	ENSOMEG00000020177	sf3a3	100	67.331	Oryzias_melastigma
ENSCING00000002730	-	100	67.530	ENSOARG00000019950	SF3A3	100	67.530	Ovis_aries
ENSCING00000002730	-	100	51.195	ENSPPAG00000039955	-	100	51.394	Pan_paniscus
ENSCING00000002730	-	100	67.729	ENSPPAG00000034066	SF3A3	100	67.729	Pan_paniscus
ENSCING00000002730	-	100	67.530	ENSPPRG00000001258	SF3A3	100	67.530	Panthera_pardus
ENSCING00000002730	-	100	67.530	ENSPTIG00000007515	SF3A3	100	67.530	Panthera_tigris_altaica
ENSCING00000002730	-	100	51.594	ENSPTRG00000046013	-	100	51.793	Pan_troglodytes
ENSCING00000002730	-	100	67.729	ENSPTRG00000000559	SF3A3	100	67.729	Pan_troglodytes
ENSCING00000002730	-	100	67.729	ENSPANG00000021859	SF3A3	100	67.729	Papio_anubis
ENSCING00000002730	-	86	71.765	ENSPANG00000031214	-	100	50.199	Papio_anubis
ENSCING00000002730	-	100	59.761	ENSPANG00000029393	-	100	61.355	Papio_anubis
ENSCING00000002730	-	100	68.127	ENSPKIG00000004719	sf3a3	100	68.127	Paramormyrops_kingsleyae
ENSCING00000002730	-	100	65.675	ENSPSIG00000004273	SF3A3	100	65.675	Pelodiscus_sinensis
ENSCING00000002730	-	92	66.523	ENSPMGG00000003610	sf3a3	95	66.523	Periophthalmus_magnuspinnatus
ENSCING00000002730	-	100	67.729	ENSPEMG00000020805	Sf3a3	100	67.729	Peromyscus_maniculatus_bairdii
ENSCING00000002730	-	54	60.000	ENSPMAG00000001044	sf3a3	98	60.000	Petromyzon_marinus
ENSCING00000002730	-	100	67.530	ENSPCIG00000025719	SF3A3	100	67.530	Phascolarctos_cinereus
ENSCING00000002730	-	100	67.729	ENSPFOG00000005284	sf3a3	100	67.729	Poecilia_formosa
ENSCING00000002730	-	99	64.659	ENSPLAG00000003979	sf3a3	92	64.659	Poecilia_latipinna
ENSCING00000002730	-	78	59.898	ENSPMEG00000021132	sf3a3	88	59.898	Poecilia_mexicana
ENSCING00000002730	-	100	67.530	ENSPREG00000013802	sf3a3	100	67.530	Poecilia_reticulata
ENSCING00000002730	-	100	66.534	ENSPPYG00000001519	SF3A3	100	66.534	Pongo_abelii
ENSCING00000002730	-	100	62.749	ENSPCAG00000010734	SF3A3	100	62.351	Procavia_capensis
ENSCING00000002730	-	100	55.777	ENSPCOG00000017131	-	100	55.777	Propithecus_coquereli
ENSCING00000002730	-	100	59.802	ENSPCOG00000020389	-	100	59.802	Propithecus_coquereli
ENSCING00000002730	-	100	58.964	ENSPVAG00000010158	SF3A3	87	77.249	Pteropus_vampyrus
ENSCING00000002730	-	100	68.526	ENSPNYG00000000786	sf3a3	100	68.526	Pundamilia_nyererei
ENSCING00000002730	-	100	69.124	ENSPNAG00000010298	sf3a3	100	69.124	Pygocentrus_nattereri
ENSCING00000002730	-	100	67.729	ENSRNOG00000007629	Sf3a3	100	67.729	Rattus_norvegicus
ENSCING00000002730	-	100	67.729	ENSRBIG00000043567	SF3A3	100	67.729	Rhinopithecus_bieti
ENSCING00000002730	-	100	51.793	ENSRBIG00000041123	-	100	52.789	Rhinopithecus_bieti
ENSCING00000002730	-	100	50.398	ENSRBIG00000043833	-	100	49.801	Rhinopithecus_bieti
ENSCING00000002730	-	100	67.729	ENSRROG00000033888	SF3A3	100	67.729	Rhinopithecus_roxellana
ENSCING00000002730	-	94	54.468	ENSRROG00000032346	-	100	55.957	Rhinopithecus_roxellana
ENSCING00000002730	-	89	69.592	ENSSBOG00000032688	SF3A3	100	70.724	Saimiri_boliviensis_boliviensis
ENSCING00000002730	-	100	52.390	ENSSBOG00000026932	-	100	51.394	Saimiri_boliviensis_boliviensis
ENSCING00000002730	-	90	67.621	ENSSHAG00000014530	SF3A3	100	67.841	Sarcophilus_harrisii
ENSCING00000002730	-	100	68.526	ENSSFOG00015005975	sf3a3	100	68.526	Scleropages_formosus
ENSCING00000002730	-	100	67.530	ENSSMAG00000020213	sf3a3	100	67.530	Scophthalmus_maximus
ENSCING00000002730	-	100	64.940	ENSSDUG00000011590	sf3a3	100	64.940	Seriola_dumerili
ENSCING00000002730	-	100	68.327	ENSSLDG00000020635	sf3a3	100	68.327	Seriola_lalandi_dorsalis
ENSCING00000002730	-	100	67.928	ENSSPUG00000004010	SF3A3	100	67.928	Sphenodon_punctatus
ENSCING00000002730	-	100	68.127	ENSSPAG00000018653	sf3a3	100	68.127	Stegastes_partitus
ENSCING00000002730	-	100	67.530	ENSSSCG00000003643	SF3A3	100	67.530	Sus_scrofa
ENSCING00000002730	-	87	67.431	ENSTGUG00000001466	SF3A3	100	67.277	Taeniopygia_guttata
ENSCING00000002730	-	100	68.127	ENSTRUG00000009089	sf3a3	100	68.127	Takifugu_rubripes
ENSCING00000002730	-	100	67.460	ENSTNIG00000009800	sf3a3	100	67.460	Tetraodon_nigroviridis
ENSCING00000002730	-	100	58.765	ENSTBEG00000007614	SF3A3	100	58.765	Tupaia_belangeri
ENSCING00000002730	-	100	67.331	ENSTTRG00000013519	SF3A3	100	67.331	Tursiops_truncatus
ENSCING00000002730	-	100	67.530	ENSUAMG00000006134	SF3A3	100	67.530	Ursus_americanus
ENSCING00000002730	-	100	67.530	ENSUMAG00000021250	SF3A3	100	67.530	Ursus_maritimus
ENSCING00000002730	-	66	74.419	ENSVPAG00000004778	SF3A3	73	74.419	Vicugna_pacos
ENSCING00000002730	-	100	64.343	ENSVVUG00000022908	SF3A3	100	64.343	Vulpes_vulpes
ENSCING00000002730	-	100	67.331	ENSXETG00000022923	sf3a3	100	67.331	Xenopus_tropicalis
ENSCING00000002730	-	100	67.729	ENSXMAG00000017165	sf3a3	100	67.729	Xiphophorus_maculatus