EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002791 (Gene tree)
Gene ID: 100185062
Gene Symbol: -
Alias: -
Full Name: 39S ribosomal protein L23%2C mitochondrial-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1618 bases
Position: chrHT000177.1:90836-92453
Accession: 100185062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005704	Ribosomal_L23	PF00276.20	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005704	-	795	XM_002121158	ENSCINP00000005704	177 (aa)	XP_002121194	F6XMY3

Gene Model

Click here to download ENSCING00000002791's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002791's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002791	-	79	30.714	ENSG00000214026	MRPL23	88	31.250	Homo_sapiens
ENSCING00000002791	-	77	37.226	ENSAPOG00000013198	mrpl23	68	39.640	Acanthochromis_polyacanthus
ENSCING00000002791	-	77	37.226	ENSACIG00000024327	mrpl23	69	39.640	Amphilophus_citrinellus
ENSCING00000002791	-	77	37.226	ENSAOCG00000013679	mrpl23	68	40.541	Amphiprion_ocellaris
ENSCING00000002791	-	77	37.226	ENSAPEG00000010298	mrpl23	68	40.541	Amphiprion_percula
ENSCING00000002791	-	77	36.496	ENSATEG00000019314	mrpl23	69	40.541	Anabas_testudineus
ENSCING00000002791	-	57	30.556	ENSAPLG00000012955	-	56	34.211	Anas_platyrhynchos
ENSCING00000002791	-	55	31.313	ENSANAG00000010507	-	69	31.532	Aotus_nancymaae
ENSCING00000002791	-	77	37.956	ENSACLG00000002565	mrpl23	68	40.541	Astatotilapia_calliptera
ENSCING00000002791	-	73	31.538	ENSAMXG00000016759	mrpl23	61	43.939	Astyanax_mexicanus
ENSCING00000002791	-	55	31.313	ENSBTAG00000000103	MRPL23	64	32.432	Bos_taurus
ENSCING00000002791	-	71	32.031	ENSCAFG00000010086	-	71	32.174	Canis_familiaris
ENSCING00000002791	-	71	32.031	ENSCAFG00020017439	-	71	32.174	Canis_lupus_dingo
ENSCING00000002791	-	79	30.714	ENSCHIG00000019224	-	77	32.174	Capra_hircus
ENSCING00000002791	-	62	31.532	ENSTSYG00000030664	-	70	31.532	Carlito_syrichta
ENSCING00000002791	-	72	31.783	ENSCPOG00000035162	-	70	33.929	Cavia_porcellus
ENSCING00000002791	-	55	31.313	ENSCCAG00000021662	-	70	31.532	Cebus_capucinus
ENSCING00000002791	-	69	31.452	ENSCATG00000019817	-	66	33.333	Cercocebus_atys
ENSCING00000002791	-	73	30.827	ENSCLAG00000015446	-	70	33.333	Chinchilla_lanigera
ENSCING00000002791	-	71	30.233	ENSCSAG00000009837	-	69	32.432	Chlorocebus_sabaeus
ENSCING00000002791	-	74	34.091	ENSCPBG00000007389	-	68	36.283	Chrysemys_picta_bellii
ENSCING00000002791	-	55	32.323	ENSCANG00000032318	-	71	32.432	Colobus_angolensis_palliatus
ENSCING00000002791	-	71	30.952	ENSCGRG00001000462	Mrpl23	72	32.432	Cricetulus_griseus_chok1gshd
ENSCING00000002791	-	71	30.952	ENSCGRG00000002207	Mrpl23	72	32.432	Cricetulus_griseus_crigri
ENSCING00000002791	-	77	35.766	ENSCSEG00000008738	mrpl23	71	39.640	Cynoglossus_semilaevis
ENSCING00000002791	-	76	38.971	ENSCVAG00000002822	mrpl23	68	42.727	Cyprinodon_variegatus
ENSCING00000002791	-	77	32.847	ENSDARG00000045696	mrpl23	69	36.036	Danio_rerio
ENSCING00000002791	-	76	30.370	ENSDNOG00000047306	-	69	30.631	Dasypus_novemcinctus
ENSCING00000002791	-	69	32.258	ENSDORG00000027504	Mrpl23	73	31.429	Dipodomys_ordii
ENSCING00000002791	-	81	31.250	ENSEASG00005000456	-	52	30.464	Equus_asinus_asinus
ENSCING00000002791	-	71	39.062	ENSELUG00000022256	RM23	72	38.596	Esox_lucius
ENSCING00000002791	-	76	33.577	ENSFALG00000011598	-	68	36.283	Ficedula_albicollis
ENSCING00000002791	-	70	30.400	ENSFDAG00000013606	-	74	31.250	Fukomys_damarensis
ENSCING00000002791	-	81	37.241	ENSFHEG00000010978	mrpl23	71	40.000	Fundulus_heteroclitus
ENSCING00000002791	-	77	33.577	ENSGMOG00000004509	mrpl23	74	35.398	Gadus_morhua
ENSCING00000002791	-	77	38.686	ENSGAFG00000021827	mrpl23	68	42.342	Gambusia_affinis
ENSCING00000002791	-	71	39.844	ENSGACG00000011130	mrpl23	68	40.541	Gasterosteus_aculeatus
ENSCING00000002791	-	74	34.091	ENSGAGG00000023827	-	68	36.283	Gopherus_agassizii
ENSCING00000002791	-	79	30.496	ENSGGOG00000000333	-	59	32.432	Gorilla_gorilla
ENSCING00000002791	-	78	38.849	ENSHBUG00000023397	mrpl23	68	41.441	Haplochromis_burtoni
ENSCING00000002791	-	76	30.370	ENSHGLG00000016722	-	76	31.897	Heterocephalus_glaber_female
ENSCING00000002791	-	73	30.000	ENSHGLG00100003075	-	74	31.532	Heterocephalus_glaber_male
ENSCING00000002791	-	79	33.571	ENSHCOG00000009092	mrpl23	68	36.937	Hippocampus_comes
ENSCING00000002791	-	77	35.766	ENSIPUG00000005383	mrpl23	68	38.182	Ictalurus_punctatus
ENSCING00000002791	-	84	30.201	ENSSTOG00000024573	-	70	31.532	Ictidomys_tridecemlineatus
ENSCING00000002791	-	73	38.636	ENSKMAG00000001599	mrpl23	64	42.453	Kryptolebias_marmoratus
ENSCING00000002791	-	77	36.496	ENSLBEG00000002580	mrpl23	68	38.739	Labrus_bergylta
ENSCING00000002791	-	77	34.307	ENSLACG00000011528	mrpl23	69	37.838	Latimeria_chalumnae
ENSCING00000002791	-	77	34.307	ENSLOCG00000001825	mrpl23	69	37.838	Lepisosteus_oculatus
ENSCING00000002791	-	62	32.432	ENSMFAG00000034529	-	69	32.432	Macaca_fascicularis
ENSCING00000002791	-	63	32.143	ENSMMUG00000031268	MRPL23	69	32.143	Macaca_mulatta
ENSCING00000002791	-	55	32.323	ENSMNEG00000036690	-	69	32.432	Macaca_nemestrina
ENSCING00000002791	-	55	32.323	ENSMLEG00000015767	-	71	32.432	Mandrillus_leucophaeus
ENSCING00000002791	-	77	35.766	ENSMAMG00000003609	mrpl23	68	38.739	Mastacembelus_armatus
ENSCING00000002791	-	78	37.410	ENSMZEG00005017456	mrpl23	68	40.541	Maylandia_zebra
ENSCING00000002791	-	77	33.577	ENSMGAG00000007978	-	70	36.364	Meleagris_gallopavo
ENSCING00000002791	-	70	31.200	ENSMAUG00000018693	Mrpl23	75	32.432	Mesocricetus_auratus
ENSCING00000002791	-	80	31.034	ENSMICG00000042091	-	74	32.520	Microcebus_murinus
ENSCING00000002791	-	70	31.200	ENSMOCG00000018436	Mrpl23	72	32.432	Microtus_ochrogaster
ENSCING00000002791	-	77	36.496	ENSMMOG00000018097	mrpl23	68	39.640	Mola_mola
ENSCING00000002791	-	77	34.307	ENSMALG00000014571	mrpl23	71	39.640	Monopterus_albus
ENSCING00000002791	-	62	32.432	MGP_CAROLIEiJ_G0030727	Mrpl23	72	32.432	Mus_caroli
ENSCING00000002791	-	63	32.143	ENSMUSG00000037772	Mrpl23	72	32.432	Mus_musculus
ENSCING00000002791	-	70	31.200	MGP_PahariEiJ_G0013923	Mrpl23	72	32.432	Mus_pahari
ENSCING00000002791	-	62	32.432	MGP_SPRETEiJ_G0031836	Mrpl23	72	32.432	Mus_spretus
ENSCING00000002791	-	77	31.159	ENSNGAG00000023444	-	74	33.333	Nannospalax_galili
ENSCING00000002791	-	72	30.233	ENSNGAG00000012877	-	76	31.532	Nannospalax_galili
ENSCING00000002791	-	77	37.956	ENSNBRG00000007183	mrpl23	68	40.541	Neolamprologus_brichardi
ENSCING00000002791	-	79	30.000	ENSNLEG00000026950	-	69	31.532	Nomascus_leucogenys
ENSCING00000002791	-	77	37.681	ENSONIG00000014500	mrpl23	67	40.179	Oreochromis_niloticus
ENSCING00000002791	-	76	36.029	ENSORLG00000025383	mrpl23	68	39.091	Oryzias_latipes
ENSCING00000002791	-	78	35.252	ENSORLG00020008379	mrpl23	68	39.091	Oryzias_latipes_hni
ENSCING00000002791	-	77	37.956	ENSOMEG00000019132	mrpl23	56	39.450	Oryzias_melastigma
ENSCING00000002791	-	79	30.000	ENSOARG00000000706	-	68	31.304	Ovis_aries
ENSCING00000002791	-	79	30.496	ENSPPAG00000034414	-	69	32.432	Pan_paniscus
ENSCING00000002791	-	79	30.496	ENSPTRG00000033746	MRPL23	69	32.432	Pan_troglodytes
ENSCING00000002791	-	55	32.323	ENSPANG00000018813	-	69	32.432	Papio_anubis
ENSCING00000002791	-	77	38.129	ENSPKIG00000001102	mrpl23	70	38.938	Paramormyrops_kingsleyae
ENSCING00000002791	-	59	33.333	ENSPSIG00000012834	-	67	32.609	Pelodiscus_sinensis
ENSCING00000002791	-	73	30.827	ENSPMGG00000006407	mrpl23	65	33.645	Periophthalmus_magnuspinnatus
ENSCING00000002791	-	63	32.143	ENSPEMG00000018572	Mrpl23	73	32.727	Peromyscus_maniculatus_bairdii
ENSCING00000002791	-	71	30.709	ENSPMAG00000005259	mrpl23	68	32.432	Petromyzon_marinus
ENSCING00000002791	-	77	37.226	ENSPFOG00000014159	mrpl23	68	40.171	Poecilia_formosa
ENSCING00000002791	-	77	37.226	ENSPLAG00000023456	mrpl23	69	40.171	Poecilia_latipinna
ENSCING00000002791	-	77	37.226	ENSPMEG00000012252	mrpl23	68	40.171	Poecilia_mexicana
ENSCING00000002791	-	77	38.686	ENSPREG00000019951	mrpl23	68	42.342	Poecilia_reticulata
ENSCING00000002791	-	79	30.496	ENSPPYG00000002918	-	69	32.432	Pongo_abelii
ENSCING00000002791	-	79	30.714	ENSPCOG00000026555	-	90	30.714	Propithecus_coquereli
ENSCING00000002791	-	55	32.323	ENSPVAG00000000331	-	61	32.323	Pteropus_vampyrus
ENSCING00000002791	-	80	36.424	ENSPNYG00000015541	mrpl23	73	38.400	Pundamilia_nyererei
ENSCING00000002791	-	71	35.938	ENSPNAG00000010548	mrpl23	69	36.036	Pygocentrus_nattereri
ENSCING00000002791	-	70	31.200	ENSRNOG00000020354	Mrpl23	72	32.432	Rattus_norvegicus
ENSCING00000002791	-	55	32.323	ENSRBIG00000041638	-	69	32.432	Rhinopithecus_bieti
ENSCING00000002791	-	55	32.323	ENSRROG00000004661	-	71	32.432	Rhinopithecus_roxellana
ENSCING00000002791	-	77	31.387	ENSSHAG00000002716	-	71	33.333	Sarcophilus_harrisii
ENSCING00000002791	-	77	35.036	ENSSFOG00015002519	mrpl23	70	36.283	Scleropages_formosus
ENSCING00000002791	-	80	36.552	ENSSMAG00000009264	mrpl23	72	38.462	Scophthalmus_maximus
ENSCING00000002791	-	77	36.496	ENSSDUG00000019634	mrpl23	71	39.640	Seriola_dumerili
ENSCING00000002791	-	77	36.496	ENSSLDG00000012055	mrpl23	68	39.640	Seriola_lalandi_dorsalis
ENSCING00000002791	-	77	33.088	ENSSPUG00000002656	-	70	34.821	Sphenodon_punctatus
ENSCING00000002791	-	77	37.681	ENSSPAG00000001601	mrpl23	72	41.071	Stegastes_partitus
ENSCING00000002791	-	73	32.836	ENSSSCG00000038364	-	73	33.913	Sus_scrofa
ENSCING00000002791	-	77	32.374	ENSTGUG00000009338	MRPL23	71	34.513	Taeniopygia_guttata
ENSCING00000002791	-	77	37.226	ENSTRUG00000009637	mrpl23	68	40.541	Takifugu_rubripes
ENSCING00000002791	-	55	32.323	ENSTTRG00000009281	-	56	32.323	Tursiops_truncatus
ENSCING00000002791	-	85	30.921	ENSUAMG00000020867	-	92	30.921	Ursus_americanus
ENSCING00000002791	-	71	31.008	ENSVVUG00000002581	-	56	31.034	Vulpes_vulpes
ENSCING00000002791	-	62	33.333	ENSXETG00000014017	mrpl23	69	33.333	Xenopus_tropicalis
ENSCING00000002791	-	77	36.765	ENSXCOG00000020628	mrpl23	52	53.731	Xiphophorus_couchianus
ENSCING00000002791	-	77	38.686	ENSXMAG00000015496	mrpl23	68	42.342	Xiphophorus_maculatus