EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002840 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 5738 bases
Position: chrHT000155.1:48088-53825
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005797	IBN_N	PF03810.19	5.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005797	-	2613	-	ENSCINP00000005797	856 (aa)	-	F6WCM9

Gene Model

Click here to download ENSCING00000002840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002840	-	99	38.639	ENSG00000132953	XPO4	75	38.408	Homo_sapiens
ENSCING00000002840	-	99	38.870	ENSAMEG00000014679	XPO4	75	38.639	Ailuropoda_melanoleuca
ENSCING00000002840	-	97	37.931	ENSACIG00000006476	xpo4	75	37.844	Amphilophus_citrinellus
ENSCING00000002840	-	97	38.941	ENSATEG00000001554	xpo4	75	38.941	Anabas_testudineus
ENSCING00000002840	-	98	39.156	ENSAPLG00000003203	XPO4	74	38.921	Anas_platyrhynchos
ENSCING00000002840	-	99	38.799	ENSACAG00000002526	XPO4	75	38.337	Anolis_carolinensis
ENSCING00000002840	-	100	37.175	ENSACLG00000017587	xpo4	75	37.317	Astatotilapia_calliptera
ENSCING00000002840	-	97	38.902	ENSAMXG00000005543	xpo4	75	38.435	Astyanax_mexicanus
ENSCING00000002840	-	99	38.364	ENSBTAG00000003710	XPO4	75	38.134	Bos_taurus
ENSCING00000002840	-	99	38.524	ENSCJAG00000004899	XPO4	75	38.293	Callithrix_jacchus
ENSCING00000002840	-	99	38.754	ENSCAFG00000007222	XPO4	75	38.524	Canis_familiaris
ENSCING00000002840	-	99	38.408	ENSCCAG00000020123	XPO4	75	38.178	Cebus_capucinus
ENSCING00000002840	-	99	38.639	ENSCATG00000036978	XPO4	75	38.408	Cercocebus_atys
ENSCING00000002840	-	71	39.286	ENSCSAG00000018125	XPO4	68	38.961	Chlorocebus_sabaeus
ENSCING00000002840	-	99	61.350	ENSCSAVG00000008902	-	75	62.282	Ciona_savignyi
ENSCING00000002840	-	99	38.639	ENSCANG00000031628	XPO4	75	38.408	Colobus_angolensis_palliatus
ENSCING00000002840	-	99	38.985	ENSCGRG00001004627	Xpo4	75	38.524	Cricetulus_griseus_chok1gshd
ENSCING00000002840	-	99	38.857	ENSCGRG00000015666	Xpo4	75	38.400	Cricetulus_griseus_crigri
ENSCING00000002840	-	100	38.232	ENSCSEG00000009017	xpo4	75	38.232	Cynoglossus_semilaevis
ENSCING00000002840	-	100	38.921	ENSDARG00000010281	xpo4	75	38.462	Danio_rerio
ENSCING00000002840	-	98	38.713	ENSDNOG00000008001	XPO4	75	38.480	Dasypus_novemcinctus
ENSCING00000002840	-	100	37.671	ENSELUG00000006395	xpo4	75	36.986	Esox_lucius
ENSCING00000002840	-	99	38.754	ENSFCAG00000000855	XPO4	75	38.524	Felis_catus
ENSCING00000002840	-	98	39.273	ENSFALG00000008733	XPO4	73	39.039	Ficedula_albicollis
ENSCING00000002840	-	99	38.639	ENSFDAG00000017460	XPO4	75	38.408	Fukomys_damarensis
ENSCING00000002840	-	98	39.136	ENSFHEG00000015300	xpo4	74	38.668	Fundulus_heteroclitus
ENSCING00000002840	-	99	38.985	ENSGALG00000017132	XPO4	75	38.754	Gallus_gallus
ENSCING00000002840	-	100	38.002	ENSGAFG00000003860	xpo4	74	37.915	Gambusia_affinis
ENSCING00000002840	-	100	38.629	ENSGAGG00000025383	XPO4	73	38.400	Gopherus_agassizii
ENSCING00000002840	-	99	38.639	ENSGGOG00000000890	XPO4	75	38.408	Gorilla_gorilla
ENSCING00000002840	-	100	38.117	ENSHBUG00000003863	xpo4	75	38.117	Haplochromis_burtoni
ENSCING00000002840	-	99	38.754	ENSHGLG00000018113	XPO4	75	38.524	Heterocephalus_glaber_female
ENSCING00000002840	-	99	38.754	ENSHGLG00100011413	XPO4	75	38.524	Heterocephalus_glaber_male
ENSCING00000002840	-	99	37.770	ENSIPUG00000003777	xpo4	75	37.315	Ictalurus_punctatus
ENSCING00000002840	-	99	38.754	ENSSTOG00000010695	XPO4	75	38.524	Ictidomys_tridecemlineatus
ENSCING00000002840	-	99	38.198	ENSKMAG00000013983	xpo4	75	38.198	Kryptolebias_marmoratus
ENSCING00000002840	-	100	37.844	ENSLBEG00000014303	xpo4	75	38.073	Labrus_bergylta
ENSCING00000002840	-	83	39.394	ENSLOCG00000010910	xpo4	72	38.556	Lepisosteus_oculatus
ENSCING00000002840	-	99	38.870	ENSLAFG00000003781	XPO4	75	38.639	Loxodonta_africana
ENSCING00000002840	-	99	38.639	ENSMFAG00000030414	XPO4	75	38.408	Macaca_fascicularis
ENSCING00000002840	-	99	38.524	ENSMNEG00000043776	XPO4	75	38.293	Macaca_nemestrina
ENSCING00000002840	-	100	38.303	ENSMAMG00000020520	xpo4	75	38.532	Mastacembelus_armatus
ENSCING00000002840	-	100	38.117	ENSMZEG00005019337	xpo4	77	38.117	Maylandia_zebra
ENSCING00000002840	-	99	38.479	ENSMICG00000004636	XPO4	75	38.249	Microcebus_murinus
ENSCING00000002840	-	99	38.870	ENSMOCG00000006678	Xpo4	75	38.639	Microtus_ochrogaster
ENSCING00000002840	-	99	37.853	ENSMMOG00000019453	xpo4	75	37.768	Mola_mola
ENSCING00000002840	-	99	38.717	ENSMODG00000008262	XPO4	75	38.488	Monodelphis_domestica
ENSCING00000002840	-	98	36.501	ENSMALG00000018033	xpo4	73	36.501	Monopterus_albus
ENSCING00000002840	-	99	38.870	MGP_CAROLIEiJ_G0019352	Xpo4	75	38.524	Mus_caroli
ENSCING00000002840	-	99	38.870	ENSMUSG00000021952	Xpo4	75	38.524	Mus_musculus
ENSCING00000002840	-	99	38.870	MGP_PahariEiJ_G0030370	Xpo4	75	38.524	Mus_pahari
ENSCING00000002840	-	99	38.870	MGP_SPRETEiJ_G0020246	Xpo4	75	38.524	Mus_spretus
ENSCING00000002840	-	88	39.577	ENSMPUG00000000600	XPO4	72	39.251	Mustela_putorius_furo
ENSCING00000002840	-	98	38.856	ENSMLUG00000012089	-	75	39.207	Myotis_lucifugus
ENSCING00000002840	-	99	38.524	ENSNGAG00000014823	Xpo4	75	38.293	Nannospalax_galili
ENSCING00000002840	-	64	41.485	ENSNBRG00000011410	xpo4	60	41.485	Neolamprologus_brichardi
ENSCING00000002840	-	99	38.524	ENSNLEG00000001816	XPO4	75	38.293	Nomascus_leucogenys
ENSCING00000002840	-	86	40.501	ENSOPRG00000010581	XPO4	65	40.084	Ochotona_princeps
ENSCING00000002840	-	100	38.117	ENSONIG00000015714	xpo4	75	38.117	Oreochromis_niloticus
ENSCING00000002840	-	99	38.832	ENSOANG00000009030	-	75	38.603	Ornithorhynchus_anatinus
ENSCING00000002840	-	98	38.947	ENSOCUG00000008490	XPO4	74	38.713	Oryctolagus_cuniculus
ENSCING00000002840	-	100	36.625	ENSORLG00000013136	xpo4	74	38.687	Oryzias_latipes
ENSCING00000002840	-	100	36.625	ENSORLG00020009218	xpo4	75	38.634	Oryzias_latipes_hni
ENSCING00000002840	-	100	38.117	ENSORLG00015012168	xpo4	75	38.347	Oryzias_latipes_hsok
ENSCING00000002840	-	97	37.067	ENSOMEG00000009492	xpo4	75	37.500	Oryzias_melastigma
ENSCING00000002840	-	98	39.019	ENSOGAG00000000048	XPO4	74	38.785	Otolemur_garnettii
ENSCING00000002840	-	98	38.551	ENSOARG00000013784	XPO4	75	38.318	Ovis_aries
ENSCING00000002840	-	99	38.639	ENSPPAG00000031464	XPO4	75	38.408	Pan_paniscus
ENSCING00000002840	-	99	38.870	ENSPPRG00000017050	XPO4	75	38.639	Panthera_pardus
ENSCING00000002840	-	99	38.639	ENSPANG00000001765	XPO4	75	38.408	Papio_anubis
ENSCING00000002840	-	100	38.691	ENSPKIG00000001940	xpo4	75	38.002	Paramormyrops_kingsleyae
ENSCING00000002840	-	85	39.562	ENSPSIG00000006908	XPO4	71	39.226	Pelodiscus_sinensis
ENSCING00000002840	-	99	38.870	ENSPEMG00000017255	Xpo4	75	38.639	Peromyscus_maniculatus_bairdii
ENSCING00000002840	-	99	38.488	ENSPCIG00000000193	XPO4	75	38.259	Phascolarctos_cinereus
ENSCING00000002840	-	100	37.699	ENSPFOG00000005062	xpo4	75	38.330	Poecilia_formosa
ENSCING00000002840	-	100	35.369	ENSPLAG00000001184	xpo4	74	35.599	Poecilia_latipinna
ENSCING00000002840	-	100	35.443	ENSPMEG00000016525	xpo4	74	35.673	Poecilia_mexicana
ENSCING00000002840	-	100	38.171	ENSPREG00000000899	xpo4	75	38.400	Poecilia_reticulata
ENSCING00000002840	-	99	38.524	ENSPPYG00000005196	XPO4	75	38.293	Pongo_abelii
ENSCING00000002840	-	94	35.976	ENSPCAG00000004580	XPO4	70	35.366	Procavia_capensis
ENSCING00000002840	-	88	39.623	ENSPCOG00000013299	-	74	32.523	Propithecus_coquereli
ENSCING00000002840	-	100	37.175	ENSPNYG00000006605	xpo4	75	37.317	Pundamilia_nyererei
ENSCING00000002840	-	100	38.921	ENSPNAG00000005781	xpo4	75	38.232	Pygocentrus_nattereri
ENSCING00000002840	-	99	38.870	ENSRNOG00000010137	Xpo4	75	38.639	Rattus_norvegicus
ENSCING00000002840	-	99	38.754	ENSRROG00000034581	XPO4	75	38.524	Rhinopithecus_roxellana
ENSCING00000002840	-	99	38.408	ENSSBOG00000020841	XPO4	75	38.178	Saimiri_boliviensis_boliviensis
ENSCING00000002840	-	88	38.752	ENSSHAG00000006069	XPO4	73	38.492	Sarcophilus_harrisii
ENSCING00000002840	-	97	39.105	ENSSFOG00015001025	xpo4	75	38.398	Scleropages_formosus
ENSCING00000002840	-	100	37.887	ENSSMAG00000007828	xpo4	75	38.117	Scophthalmus_maximus
ENSCING00000002840	-	85	38.089	ENSSDUG00000013955	xpo4	66	38.089	Seriola_dumerili
ENSCING00000002840	-	100	37.428	ENSSLDG00000013233	xpo4	74	37.428	Seriola_lalandi_dorsalis
ENSCING00000002840	-	98	38.759	ENSSPUG00000014529	XPO4	74	38.407	Sphenodon_punctatus
ENSCING00000002840	-	85	40.236	ENSSSCG00000009276	XPO4	72	39.731	Sus_scrofa
ENSCING00000002840	-	98	39.090	ENSTGUG00000011343	XPO4	75	38.856	Taeniopygia_guttata
ENSCING00000002840	-	100	37.788	ENSTRUG00000015851	xpo4	75	37.788	Takifugu_rubripes
ENSCING00000002840	-	100	38.558	ENSTNIG00000015669	xpo4	75	38.558	Tetraodon_nigroviridis
ENSCING00000002840	-	99	38.524	ENSTTRG00000015597	XPO4	75	38.293	Tursiops_truncatus
ENSCING00000002840	-	90	38.583	ENSXCOG00000018340	xpo4	74	34.926	Xiphophorus_couchianus
ENSCING00000002840	-	100	37.136	ENSXMAG00000014884	xpo4	76	37.136	Xiphophorus_maculatus