EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002841 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5249 bases
Position: chrHT000049.1:139688-144936
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000022307	GTP_EFTU	PF00009.27	2.5e-53	1	1
ENSCINP00000022307	GTP_EFTU_D2	PF03144.25	3.9e-13	1	1
ENSCINP00000022307	GTP_EFTU_D3	PF03143.17	6.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000022553	-	1752	-	ENSCINP00000022307	428 (aa)	-	F6TX56

Gene Model

Click here to download ENSCING00000002841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002841	-	93	57.711	ENSG00000178952	TUFM	88	57.711	Homo_sapiens
ENSCING00000002841	-	94	58.663	ENSAPOG00000013385	tufm	91	58.663	Acanthochromis_polyacanthus
ENSCING00000002841	-	93	57.960	ENSAMEG00000015551	TUFM	89	57.960	Ailuropoda_melanoleuca
ENSCING00000002841	-	94	57.921	ENSACIG00000007388	tufm	93	57.921	Amphilophus_citrinellus
ENSCING00000002841	-	94	58.911	ENSAOCG00000001032	tufm	94	58.663	Amphiprion_ocellaris
ENSCING00000002841	-	94	58.911	ENSAPEG00000015751	tufm	94	58.663	Amphiprion_percula
ENSCING00000002841	-	94	57.673	ENSATEG00000002905	tufm	88	57.673	Anabas_testudineus
ENSCING00000002841	-	91	58.824	ENSACAG00000005399	TUFM	85	58.824	Anolis_carolinensis
ENSCING00000002841	-	93	57.214	ENSANAG00000022206	TUFM	88	57.214	Aotus_nancymaae
ENSCING00000002841	-	94	58.416	ENSACLG00000007403	tufm	85	58.416	Astatotilapia_calliptera
ENSCING00000002841	-	93	58.209	ENSBTAG00000019216	TUFM	89	58.209	Bos_taurus
ENSCING00000002841	-	93	51.707	WBGene00007000	tufm-1	82	51.707	Caenorhabditis_elegans
ENSCING00000002841	-	93	57.463	ENSCJAG00000006236	TUFM	88	57.463	Callithrix_jacchus
ENSCING00000002841	-	93	57.463	ENSCAFG00000017216	TUFM	89	57.463	Canis_familiaris
ENSCING00000002841	-	93	57.463	ENSCAFG00020017574	TUFM	89	57.463	Canis_lupus_dingo
ENSCING00000002841	-	98	56.368	ENSCHIG00000020583	TUFM	94	56.368	Capra_hircus
ENSCING00000002841	-	98	56.604	ENSTSYG00000026053	TUFM	93	56.604	Carlito_syrichta
ENSCING00000002841	-	93	57.855	ENSCPOG00000010534	TUFM	89	57.855	Cavia_porcellus
ENSCING00000002841	-	93	57.463	ENSCCAG00000033296	TUFM	88	57.463	Cebus_capucinus
ENSCING00000002841	-	93	57.711	ENSCATG00000035822	TUFM	88	57.711	Cercocebus_atys
ENSCING00000002841	-	98	55.660	ENSCLAG00000013969	TUFM	94	55.660	Chinchilla_lanigera
ENSCING00000002841	-	93	57.711	ENSCSAG00000006314	TUFM	88	57.711	Chlorocebus_sabaeus
ENSCING00000002841	-	93	58.706	ENSCHOG00000009077	TUFM	88	58.706	Choloepus_hoffmanni
ENSCING00000002841	-	93	58.250	ENSCPBG00000003874	TUFM	88	58.250	Chrysemys_picta_bellii
ENSCING00000002841	-	95	85.258	ENSCSAVG00000009380	-	89	85.258	Ciona_savignyi
ENSCING00000002841	-	93	57.606	ENSCANG00000035829	TUFM	88	57.606	Colobus_angolensis_palliatus
ENSCING00000002841	-	96	56.595	ENSCGRG00001022949	Tufm	92	56.595	Cricetulus_griseus_chok1gshd
ENSCING00000002841	-	94	39.853	ENSCGRG00000013193	-	89	39.853	Cricetulus_griseus_crigri
ENSCING00000002841	-	96	56.595	ENSCGRG00000001868	-	92	56.595	Cricetulus_griseus_crigri
ENSCING00000002841	-	94	58.663	ENSCSEG00000013841	tufm	94	58.663	Cynoglossus_semilaevis
ENSCING00000002841	-	94	59.406	ENSCVAG00000006251	tufm	95	59.158	Cyprinodon_variegatus
ENSCING00000002841	-	94	59.406	ENSDARG00000104173	tufm	90	59.406	Danio_rerio
ENSCING00000002841	-	98	54.846	ENSDNOG00000047636	TUFM	93	54.846	Dasypus_novemcinctus
ENSCING00000002841	-	87	49.866	ENSDORG00000023544	-	89	49.866	Dipodomys_ordii
ENSCING00000002841	-	96	54.237	FBgn0024556	mEFTu1	84	54.237	Drosophila_melanogaster
ENSCING00000002841	-	79	47.661	ENSETEG00000009601	TUFM	86	47.661	Echinops_telfairi
ENSCING00000002841	-	95	55.854	ENSEBUG00000015907	tufm	67	55.854	Eptatretus_burgeri
ENSCING00000002841	-	93	57.960	ENSEASG00005015477	TUFM	89	57.960	Equus_asinus_asinus
ENSCING00000002841	-	93	57.960	ENSECAG00000019763	TUFM	89	57.960	Equus_caballus
ENSCING00000002841	-	79	60.234	ENSEEUG00000001402	TUFM	86	60.234	Erinaceus_europaeus
ENSCING00000002841	-	95	57.282	ENSELUG00000013410	tufm	88	57.282	Esox_lucius
ENSCING00000002841	-	93	57.606	ENSFCAG00000003103	TUFM	58	57.606	Felis_catus
ENSCING00000002841	-	85	55.586	ENSFDAG00000010881	TUFM	98	52.733	Fukomys_damarensis
ENSCING00000002841	-	95	56.098	ENSFHEG00000020646	tufm	91	56.098	Fundulus_heteroclitus
ENSCING00000002841	-	94	58.416	ENSGMOG00000014616	tufm	91	58.416	Gadus_morhua
ENSCING00000002841	-	94	58.416	ENSGAFG00000004682	tufm	95	58.168	Gambusia_affinis
ENSCING00000002841	-	94	58.416	ENSGACG00000012961	tufm	91	62.025	Gasterosteus_aculeatus
ENSCING00000002841	-	97	56.699	ENSGAGG00000006132	TUFM	96	59.383	Gopherus_agassizii
ENSCING00000002841	-	93	57.711	ENSGGOG00000014136	TUFM	90	57.317	Gorilla_gorilla
ENSCING00000002841	-	94	58.416	ENSHBUG00000019031	tufm	88	58.416	Haplochromis_burtoni
ENSCING00000002841	-	93	57.357	ENSHGLG00000006613	TUFM	89	57.357	Heterocephalus_glaber_female
ENSCING00000002841	-	93	54.613	ENSHGLG00100004096	TUFM	88	54.613	Heterocephalus_glaber_male
ENSCING00000002841	-	93	59.102	ENSHCOG00000014418	tufm	93	59.102	Hippocampus_comes
ENSCING00000002841	-	77	33.131	ENSIPUG00000020682	-	89	33.866	Ictalurus_punctatus
ENSCING00000002841	-	94	57.921	ENSIPUG00000022457	tufm	91	57.921	Ictalurus_punctatus
ENSCING00000002841	-	93	58.458	ENSSTOG00000011837	TUFM	89	58.458	Ictidomys_tridecemlineatus
ENSCING00000002841	-	99	55.427	ENSJJAG00000011840	Tufm	96	55.427	Jaculus_jaculus
ENSCING00000002841	-	94	57.426	ENSKMAG00000009794	tufm	91	57.426	Kryptolebias_marmoratus
ENSCING00000002841	-	93	59.000	ENSLBEG00000023735	tufm	94	59.000	Labrus_bergylta
ENSCING00000002841	-	95	58.049	ENSLACG00000008242	TUFM	91	58.049	Latimeria_chalumnae
ENSCING00000002841	-	93	56.468	ENSLAFG00000028911	TUFM	89	56.468	Loxodonta_africana
ENSCING00000002841	-	93	57.711	ENSMFAG00000033739	TUFM	88	57.711	Macaca_fascicularis
ENSCING00000002841	-	93	57.711	ENSMMUG00000003303	TUFM	88	57.711	Macaca_mulatta
ENSCING00000002841	-	93	57.711	ENSMNEG00000006031	TUFM	88	57.711	Macaca_nemestrina
ENSCING00000002841	-	93	57.711	ENSMLEG00000042133	TUFM	88	57.711	Mandrillus_leucophaeus
ENSCING00000002841	-	94	58.663	ENSMAMG00000002053	tufm	91	58.663	Mastacembelus_armatus
ENSCING00000002841	-	94	58.416	ENSMZEG00005010857	tufm	85	58.416	Maylandia_zebra
ENSCING00000002841	-	96	57.314	ENSMAUG00000010490	Tufm	92	57.314	Mesocricetus_auratus
ENSCING00000002841	-	93	56.965	ENSMICG00000007650	TUFM	89	56.965	Microcebus_murinus
ENSCING00000002841	-	99	54.398	ENSMOCG00000010051	Tufm	96	54.398	Microtus_ochrogaster
ENSCING00000002841	-	94	56.188	ENSMMOG00000012344	tufm	89	56.188	Mola_mola
ENSCING00000002841	-	93	57.000	ENSMODG00000015564	TUFM	88	57.000	Monodelphis_domestica
ENSCING00000002841	-	93	58.853	ENSMALG00000020254	tufm	90	58.853	Monopterus_albus
ENSCING00000002841	-	93	58.706	MGP_CAROLIEiJ_G0030449	-	89	58.706	Mus_caroli
ENSCING00000002841	-	93	58.706	MGP_CAROLIEiJ_G0030448	-	89	58.706	Mus_caroli
ENSCING00000002841	-	93	58.706	ENSMUSG00000073838	Tufm	89	58.706	Mus_musculus
ENSCING00000002841	-	93	58.706	MGP_PahariEiJ_G0013659	-	89	58.706	Mus_pahari
ENSCING00000002841	-	93	58.706	MGP_PahariEiJ_G0013658	-	89	58.706	Mus_pahari
ENSCING00000002841	-	93	54.214	MGP_SPRETEiJ_G0031563	-	90	54.214	Mus_spretus
ENSCING00000002841	-	93	58.955	MGP_SPRETEiJ_G0031562	-	89	58.955	Mus_spretus
ENSCING00000002841	-	83	55.556	ENSMPUG00000012816	TUFM	96	55.923	Mustela_putorius_furo
ENSCING00000002841	-	93	57.960	ENSMLUG00000012335	-	89	57.960	Myotis_lucifugus
ENSCING00000002841	-	93	58.209	ENSNGAG00000008610	Tufm	89	58.209	Nannospalax_galili
ENSCING00000002841	-	85	56.593	ENSNBRG00000006466	tufm	95	57.103	Neolamprologus_brichardi
ENSCING00000002841	-	93	55.335	ENSNLEG00000011063	TUFM	88	55.335	Nomascus_leucogenys
ENSCING00000002841	-	78	59.347	ENSMEUG00000011131	TUFM	97	59.347	Notamacropus_eugenii
ENSCING00000002841	-	93	49.377	ENSOPRG00000002318	-	88	49.377	Ochotona_princeps
ENSCING00000002841	-	94	58.416	ENSONIG00000019389	tufm	91	58.416	Oreochromis_niloticus
ENSCING00000002841	-	96	57.933	ENSOANG00000013114	TUFM	95	57.933	Ornithorhynchus_anatinus
ENSCING00000002841	-	93	57.711	ENSOCUG00000002683	TUFM	88	57.711	Oryctolagus_cuniculus
ENSCING00000002841	-	94	57.921	ENSORLG00000011497	tufm	91	57.921	Oryzias_latipes
ENSCING00000002841	-	99	56.036	ENSORLG00020013437	tufm	97	56.036	Oryzias_latipes_hni
ENSCING00000002841	-	94	58.168	ENSORLG00015003107	tufm	91	58.168	Oryzias_latipes_hsok
ENSCING00000002841	-	94	58.168	ENSOMEG00000016958	tufm	91	58.168	Oryzias_melastigma
ENSCING00000002841	-	98	56.368	ENSOGAG00000006875	TUFM	94	56.368	Otolemur_garnettii
ENSCING00000002841	-	93	57.921	ENSOARG00000002357	TUFM	98	57.921	Ovis_aries
ENSCING00000002841	-	93	57.711	ENSPPAG00000035168	TUFM	88	57.711	Pan_paniscus
ENSCING00000002841	-	93	57.463	ENSPPRG00000014248	TUFM	88	57.463	Panthera_pardus
ENSCING00000002841	-	93	57.711	ENSPTIG00000009980	TUFM	95	57.711	Panthera_tigris_altaica
ENSCING00000002841	-	93	57.711	ENSPTRG00000007939	TUFM	88	57.711	Pan_troglodytes
ENSCING00000002841	-	93	57.711	ENSPANG00000019624	TUFM	88	57.711	Papio_anubis
ENSCING00000002841	-	95	57.524	ENSPKIG00000023809	tufm	91	57.524	Paramormyrops_kingsleyae
ENSCING00000002841	-	72	53.871	ENSPSIG00000005302	TUFM	98	53.871	Pelodiscus_sinensis
ENSCING00000002841	-	94	58.663	ENSPMGG00000015631	tufm	96	58.663	Periophthalmus_magnuspinnatus
ENSCING00000002841	-	96	56.835	ENSPEMG00000012208	Tufm	92	56.835	Peromyscus_maniculatus_bairdii
ENSCING00000002841	-	98	54.312	ENSPCIG00000025208	TUFM	94	54.312	Phascolarctos_cinereus
ENSCING00000002841	-	99	56.338	ENSPFOG00000007043	tufm	94	56.338	Poecilia_formosa
ENSCING00000002841	-	99	55.991	ENSPLAG00000014372	tufm	97	55.991	Poecilia_latipinna
ENSCING00000002841	-	99	56.221	ENSPMEG00000019508	tufm	97	56.221	Poecilia_mexicana
ENSCING00000002841	-	98	56.909	ENSPMEG00000014520	-	95	61.314	Poecilia_mexicana
ENSCING00000002841	-	99	53.456	ENSPREG00000013913	tufm	97	53.456	Poecilia_reticulata
ENSCING00000002841	-	93	57.463	ENSPPYG00000007226	TUFM	88	57.463	Pongo_abelii
ENSCING00000002841	-	93	54.568	ENSPCAG00000015294	TUFM	89	54.568	Procavia_capensis
ENSCING00000002841	-	93	56.965	ENSPCOG00000012267	TUFM	88	56.965	Propithecus_coquereli
ENSCING00000002841	-	94	58.065	ENSPNYG00000008905	tufm	91	58.065	Pundamilia_nyererei
ENSCING00000002841	-	94	57.426	ENSPNAG00000018881	tufm	91	57.426	Pygocentrus_nattereri
ENSCING00000002841	-	93	58.706	ENSRNOG00000018604	Tufm	89	58.706	Rattus_norvegicus
ENSCING00000002841	-	58	53.175	ENSRBIG00000036713	-	92	53.175	Rhinopithecus_bieti
ENSCING00000002841	-	90	56.812	ENSRBIG00000042008	-	87	56.812	Rhinopithecus_bieti
ENSCING00000002841	-	93	57.606	ENSRROG00000036858	-	88	57.606	Rhinopithecus_roxellana
ENSCING00000002841	-	61	60.377	ENSRROG00000044977	-	72	60.377	Rhinopithecus_roxellana
ENSCING00000002841	-	98	50.930	YOR187W	TUF1	98	50.930	Saccharomyces_cerevisiae
ENSCING00000002841	-	93	57.214	ENSSBOG00000026542	TUFM	89	57.214	Saimiri_boliviensis_boliviensis
ENSCING00000002841	-	98	56.706	ENSSHAG00000012121	TUFM	98	56.706	Sarcophilus_harrisii
ENSCING00000002841	-	96	56.691	ENSSFOG00015013352	tufm	93	56.691	Scleropages_formosus
ENSCING00000002841	-	94	59.158	ENSSMAG00000010053	tufm	91	59.158	Scophthalmus_maximus
ENSCING00000002841	-	94	59.158	ENSSDUG00000016896	tufm	91	59.158	Seriola_dumerili
ENSCING00000002841	-	94	59.158	ENSSLDG00000006494	tufm	91	59.158	Seriola_lalandi_dorsalis
ENSCING00000002841	-	79	59.064	ENSSARG00000011228	TUFM	90	59.064	Sorex_araneus
ENSCING00000002841	-	94	52.334	ENSSPUG00000016312	TUFM	94	52.334	Sphenodon_punctatus
ENSCING00000002841	-	94	58.416	ENSSPAG00000009936	tufm	93	58.168	Stegastes_partitus
ENSCING00000002841	-	93	58.209	ENSSSCG00000007803	TUFM	89	58.209	Sus_scrofa
ENSCING00000002841	-	94	58.911	ENSTRUG00000008300	tufm	91	58.911	Takifugu_rubripes
ENSCING00000002841	-	93	54.115	ENSTBEG00000015029	TUFM	88	55.970	Tupaia_belangeri
ENSCING00000002841	-	64	60.584	ENSTTRG00000001980	-	99	60.584	Tursiops_truncatus
ENSCING00000002841	-	59	55.731	ENSTTRG00000005930	-	56	55.731	Tursiops_truncatus
ENSCING00000002841	-	93	57.463	ENSUAMG00000001471	TUFM	89	57.463	Ursus_americanus
ENSCING00000002841	-	93	57.463	ENSUMAG00000009341	TUFM	99	57.463	Ursus_maritimus
ENSCING00000002841	-	64	59.341	ENSVPAG00000009541	TUFM	99	59.341	Vicugna_pacos
ENSCING00000002841	-	93	57.463	ENSVVUG00000024170	TUFM	89	57.463	Vulpes_vulpes
ENSCING00000002841	-	87	38.281	ENSXETG00000028019	-	69	77.419	Xenopus_tropicalis
ENSCING00000002841	-	94	58.663	ENSXMAG00000011848	tufm	93	58.663	Xiphophorus_maculatus