EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002867 (Gene tree)
Gene ID: 100183594
Gene Symbol: ercc3
Alias: -
Full Name: Ciona intestinalis excision repair cross-complementing rodent repair deficiency%2C complementation group 3 (ercc3)%2C mRNA.
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2382 bases
Position: chr7:459120-461501
Accession: NM_001130095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000005835	ResIII	PF04851.15	2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000005835	-	2382	-	ENSCINP00000005835	794 (aa)	XP_002119177	F6TML4

Gene Model

Click here to download ENSCING00000002867's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03022	Basal transcription factors	KEGG
cin03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002867	ercc3	95	72.200	ENSG00000163161	ERCC3	99	81.250	Homo_sapiens
ENSCING00000002867	ercc3	96	71.317	ENSAPOG00000014383	ercc3	96	71.317	Acanthochromis_polyacanthus
ENSCING00000002867	ercc3	96	71.785	ENSAMEG00000016840	ERCC3	96	71.785	Ailuropoda_melanoleuca
ENSCING00000002867	ercc3	96	70.795	ENSACIG00000000126	ercc3	97	70.795	Amphilophus_citrinellus
ENSCING00000002867	ercc3	96	71.186	ENSAOCG00000009396	ercc3	96	71.186	Amphiprion_ocellaris
ENSCING00000002867	ercc3	96	71.056	ENSAPEG00000023077	ercc3	96	71.056	Amphiprion_percula
ENSCING00000002867	ercc3	99	69.483	ENSATEG00000014860	ercc3	96	71.224	Anabas_testudineus
ENSCING00000002867	ercc3	90	72.414	ENSAPLG00000012068	ERCC3	98	72.414	Anas_platyrhynchos
ENSCING00000002867	ercc3	91	73.077	ENSACAG00000009919	ERCC3	99	73.077	Anolis_carolinensis
ENSCING00000002867	ercc3	95	72.200	ENSANAG00000031091	ERCC3	95	72.200	Aotus_nancymaae
ENSCING00000002867	ercc3	99	69.937	ENSACLG00000022508	ercc3	96	71.186	Astatotilapia_calliptera
ENSCING00000002867	ercc3	96	71.838	ENSAMXG00000036947	ercc3	96	71.838	Astyanax_mexicanus
ENSCING00000002867	ercc3	95	72.464	ENSBTAG00000020777	ERCC3	95	72.464	Bos_taurus
ENSCING00000002867	ercc3	98	61.055	WBGene00013441	xpb-1	96	62.257	Caenorhabditis_elegans
ENSCING00000002867	ercc3	95	72.332	ENSCJAG00000010416	ERCC3	95	72.332	Callithrix_jacchus
ENSCING00000002867	ercc3	96	71.859	ENSCAFG00000004497	ERCC3	96	71.859	Canis_familiaris
ENSCING00000002867	ercc3	96	71.859	ENSCAFG00020003495	ERCC3	96	71.859	Canis_lupus_dingo
ENSCING00000002867	ercc3	95	72.596	ENSCHIG00000014551	ERCC3	95	72.596	Capra_hircus
ENSCING00000002867	ercc3	95	71.937	ENSTSYG00000004137	ERCC3	96	71.937	Carlito_syrichta
ENSCING00000002867	ercc3	77	67.528	ENSCAPG00000017027	ERCC3	93	67.528	Cavia_aperea
ENSCING00000002867	ercc3	96	71.429	ENSCPOG00000002144	ERCC3	96	71.429	Cavia_porcellus
ENSCING00000002867	ercc3	95	72.332	ENSCCAG00000024421	ERCC3	95	72.332	Cebus_capucinus
ENSCING00000002867	ercc3	95	72.332	ENSCATG00000032313	ERCC3	95	72.332	Cercocebus_atys
ENSCING00000002867	ercc3	95	72.332	ENSCLAG00000002965	ERCC3	91	72.332	Chinchilla_lanigera
ENSCING00000002867	ercc3	95	72.200	ENSCSAG00000016827	ERCC3	95	72.200	Chlorocebus_sabaeus
ENSCING00000002867	ercc3	79	80.702	ENSCHOG00000007414	ERCC3	78	80.702	Choloepus_hoffmanni
ENSCING00000002867	ercc3	91	73.626	ENSCPBG00000013638	ERCC3	99	73.626	Chrysemys_picta_bellii
ENSCING00000002867	ercc3	95	72.596	ENSCANG00000007094	ERCC3	95	72.596	Colobus_angolensis_palliatus
ENSCING00000002867	ercc3	96	72.346	ENSCGRG00001009426	Ercc3	96	72.346	Cricetulus_griseus_chok1gshd
ENSCING00000002867	ercc3	93	72.237	ENSCGRG00000015547	Ercc3	96	72.237	Cricetulus_griseus_crigri
ENSCING00000002867	ercc3	96	71.001	ENSCSEG00000016479	ercc3	96	71.001	Cynoglossus_semilaevis
ENSCING00000002867	ercc3	95	71.391	ENSCVAG00000015177	ercc3	96	70.930	Cyprinodon_variegatus
ENSCING00000002867	ercc3	96	72.063	ENSDARG00000002402	ercc3	96	72.005	Danio_rerio
ENSCING00000002867	ercc3	55	78.330	ENSDNOG00000035027	ERCC3	94	78.330	Dasypus_novemcinctus
ENSCING00000002867	ercc3	96	72.513	ENSDORG00000004671	Ercc3	96	72.513	Dipodomys_ordii
ENSCING00000002867	ercc3	100	64.969	FBgn0001179	hay	94	67.678	Drosophila_melanogaster
ENSCING00000002867	ercc3	85	74.331	ENSETEG00000019887	ERCC3	85	74.331	Echinops_telfairi
ENSCING00000002867	ercc3	99	69.500	ENSEBUG00000009773	ercc3	95	71.056	Eptatretus_burgeri
ENSCING00000002867	ercc3	96	72.078	ENSEASG00005022466	ERCC3	94	72.288	Equus_asinus_asinus
ENSCING00000002867	ercc3	96	72.346	ENSECAG00000006589	ERCC3	96	72.346	Equus_caballus
ENSCING00000002867	ercc3	90	72.601	ENSEEUG00000001057	ERCC3	96	72.601	Erinaceus_europaeus
ENSCING00000002867	ercc3	96	70.065	ENSELUG00000000089	ercc3	96	70.065	Esox_lucius
ENSCING00000002867	ercc3	96	71.560	ENSFCAG00000006989	ERCC3	96	71.560	Felis_catus
ENSCING00000002867	ercc3	95	70.964	ENSFALG00000003936	ERCC3	95	70.964	Ficedula_albicollis
ENSCING00000002867	ercc3	95	71.768	ENSFDAG00000011924	ERCC3	95	71.768	Fukomys_damarensis
ENSCING00000002867	ercc3	95	71.429	ENSFHEG00000005185	ercc3	95	71.429	Fundulus_heteroclitus
ENSCING00000002867	ercc3	95	70.341	ENSGMOG00000018032	ercc3	95	70.341	Gadus_morhua
ENSCING00000002867	ercc3	96	71.634	ENSGALG00000011515	ERCC3	96	71.634	Gallus_gallus
ENSCING00000002867	ercc3	95	71.298	ENSGAFG00000011936	ercc3	96	70.795	Gambusia_affinis
ENSCING00000002867	ercc3	99	69.144	ENSGACG00000015218	ercc3	99	71.913	Gasterosteus_aculeatus
ENSCING00000002867	ercc3	91	73.352	ENSGAGG00000018579	ERCC3	99	73.352	Gopherus_agassizii
ENSCING00000002867	ercc3	95	72.332	ENSGGOG00000015255	ERCC3	95	72.332	Gorilla_gorilla
ENSCING00000002867	ercc3	99	69.937	ENSHBUG00000003818	ercc3	96	71.186	Haplochromis_burtoni
ENSCING00000002867	ercc3	95	72.332	ENSHGLG00000011014	ERCC3	95	72.332	Heterocephalus_glaber_female
ENSCING00000002867	ercc3	95	72.332	ENSHGLG00100013806	ERCC3	95	72.332	Heterocephalus_glaber_male
ENSCING00000002867	ercc3	99	70.189	ENSHCOG00000016924	ercc3	96	71.447	Hippocampus_comes
ENSCING00000002867	ercc3	96	71.615	ENSIPUG00000021000	ercc3	96	71.615	Ictalurus_punctatus
ENSCING00000002867	ercc3	96	72.346	ENSSTOG00000011001	ERCC3	96	72.346	Ictidomys_tridecemlineatus
ENSCING00000002867	ercc3	89	72.462	ENSJJAG00000001117	Ercc3	99	72.462	Jaculus_jaculus
ENSCING00000002867	ercc3	96	71.279	ENSKMAG00000021764	ercc3	96	71.279	Kryptolebias_marmoratus
ENSCING00000002867	ercc3	96	70.888	ENSLBEG00000000468	ercc3	96	70.888	Labrus_bergylta
ENSCING00000002867	ercc3	96	68.299	ENSLACG00000014815	ERCC3	96	68.299	Latimeria_chalumnae
ENSCING00000002867	ercc3	89	68.619	ENSLOCG00000010907	ercc3	86	68.619	Lepisosteus_oculatus
ENSCING00000002867	ercc3	95	72.464	ENSLAFG00000014866	ERCC3	95	72.464	Loxodonta_africana
ENSCING00000002867	ercc3	95	72.332	ENSMFAG00000003370	ERCC3	95	72.332	Macaca_fascicularis
ENSCING00000002867	ercc3	95	68.791	ENSMNEG00000004215	ERCC3	95	68.791	Macaca_nemestrina
ENSCING00000002867	ercc3	95	72.332	ENSMLEG00000042061	ERCC3	95	72.332	Mandrillus_leucophaeus
ENSCING00000002867	ercc3	99	70.366	ENSMAMG00000004505	ercc3	96	71.802	Mastacembelus_armatus
ENSCING00000002867	ercc3	99	69.937	ENSMZEG00005004854	ercc3	96	71.186	Maylandia_zebra
ENSCING00000002867	ercc3	89	73.352	ENSMGAG00000011706	ERCC3	99	73.529	Meleagris_gallopavo
ENSCING00000002867	ercc3	96	72.135	ENSMAUG00000004515	Ercc3	96	72.135	Mesocricetus_auratus
ENSCING00000002867	ercc3	96	71.822	ENSMICG00000009578	ERCC3	96	71.822	Microcebus_murinus
ENSCING00000002867	ercc3	96	72.215	ENSMOCG00000021767	Ercc3	96	72.215	Microtus_ochrogaster
ENSCING00000002867	ercc3	96	70.930	ENSMMOG00000018174	ercc3	96	70.930	Mola_mola
ENSCING00000002867	ercc3	96	71.634	ENSMODG00000018695	ERCC3	96	71.634	Monodelphis_domestica
ENSCING00000002867	ercc3	99	69.686	ENSMALG00000014944	ercc3	96	70.665	Monopterus_albus
ENSCING00000002867	ercc3	96	72.251	MGP_CAROLIEiJ_G0022075	Ercc3	96	72.251	Mus_caroli
ENSCING00000002867	ercc3	96	71.895	ENSMUSG00000024382	Ercc3	96	71.818	Mus_musculus
ENSCING00000002867	ercc3	96	72.346	MGP_PahariEiJ_G0018809	Ercc3	96	72.346	Mus_pahari
ENSCING00000002867	ercc3	96	72.026	MGP_SPRETEiJ_G0022987	Ercc3	96	71.948	Mus_spretus
ENSCING00000002867	ercc3	96	71.691	ENSMPUG00000012021	ERCC3	96	71.691	Mustela_putorius_furo
ENSCING00000002867	ercc3	92	70.068	ENSMLUG00000007429	ERCC3	99	70.068	Myotis_lucifugus
ENSCING00000002867	ercc3	94	71.162	ENSNGAG00000019598	Ercc3	95	73.333	Nannospalax_galili
ENSCING00000002867	ercc3	99	69.937	ENSNBRG00000019074	ercc3	96	71.186	Neolamprologus_brichardi
ENSCING00000002867	ercc3	91	71.448	ENSNLEG00000015665	ERCC3	96	71.448	Nomascus_leucogenys
ENSCING00000002867	ercc3	95	70.487	ENSOPRG00000004553	ERCC3	95	70.487	Ochotona_princeps
ENSCING00000002867	ercc3	96	72.346	ENSODEG00000005795	ERCC3	96	72.346	Octodon_degus
ENSCING00000002867	ercc3	96	71.056	ENSONIG00000003255	ercc3	96	71.056	Oreochromis_niloticus
ENSCING00000002867	ercc3	96	71.953	ENSOCUG00000002248	ERCC3	96	71.953	Oryctolagus_cuniculus
ENSCING00000002867	ercc3	96	71.317	ENSORLG00000004393	ercc3	96	71.005	Oryzias_latipes
ENSCING00000002867	ercc3	96	71.317	ENSORLG00020017718	ercc3	96	71.005	Oryzias_latipes_hni
ENSCING00000002867	ercc3	96	71.186	ENSORLG00015015695	ercc3	96	70.876	Oryzias_latipes_hsok
ENSCING00000002867	ercc3	96	71.005	ENSOMEG00000015374	ercc3	96	71.005	Oryzias_melastigma
ENSCING00000002867	ercc3	96	71.932	ENSOGAG00000009103	ERCC3	96	71.932	Otolemur_garnettii
ENSCING00000002867	ercc3	95	72.596	ENSOARG00000016147	ERCC3	95	72.596	Ovis_aries
ENSCING00000002867	ercc3	95	72.332	ENSPPAG00000036166	ERCC3	95	72.332	Pan_paniscus
ENSCING00000002867	ercc3	96	71.691	ENSPPRG00000001305	ERCC3	96	71.691	Panthera_pardus
ENSCING00000002867	ercc3	91	73.315	ENSPTIG00000016969	ERCC3	99	73.315	Panthera_tigris_altaica
ENSCING00000002867	ercc3	95	72.332	ENSPTRG00000046940	ERCC3	95	72.332	Pan_troglodytes
ENSCING00000002867	ercc3	95	72.332	ENSPANG00000007699	ERCC3	95	72.332	Papio_anubis
ENSCING00000002867	ercc3	96	71.186	ENSPKIG00000001319	ercc3	99	71.186	Paramormyrops_kingsleyae
ENSCING00000002867	ercc3	91	73.324	ENSPSIG00000014682	ERCC3	99	73.324	Pelodiscus_sinensis
ENSCING00000002867	ercc3	96	71.149	ENSPMGG00000017885	ercc3	96	71.149	Periophthalmus_magnuspinnatus
ENSCING00000002867	ercc3	96	72.608	ENSPEMG00000013733	Ercc3	96	72.608	Peromyscus_maniculatus_bairdii
ENSCING00000002867	ercc3	89	69.410	ENSPMAG00000005081	ercc3	99	69.410	Petromyzon_marinus
ENSCING00000002867	ercc3	96	71.503	ENSPCIG00000011821	ERCC3	96	71.503	Phascolarctos_cinereus
ENSCING00000002867	ercc3	95	71.654	ENSPFOG00000015604	ercc3	96	71.186	Poecilia_formosa
ENSCING00000002867	ercc3	95	69.503	ENSPLAG00000022245	ercc3	99	72.329	Poecilia_latipinna
ENSCING00000002867	ercc3	95	71.654	ENSPMEG00000016987	ercc3	96	71.186	Poecilia_mexicana
ENSCING00000002867	ercc3	95	71.131	ENSPREG00000020921	ercc3	96	70.672	Poecilia_reticulata
ENSCING00000002867	ercc3	95	71.579	ENSPPYG00000012769	ERCC3	95	71.579	Pongo_abelii
ENSCING00000002867	ercc3	96	72.084	ENSPCOG00000024903	ERCC3	96	72.084	Propithecus_coquereli
ENSCING00000002867	ercc3	86	74.031	ENSPVAG00000013774	ERCC3	86	74.031	Pteropus_vampyrus
ENSCING00000002867	ercc3	99	69.937	ENSPNYG00000001208	ercc3	96	71.186	Pundamilia_nyererei
ENSCING00000002867	ercc3	96	71.186	ENSPNAG00000005748	ercc3	96	71.317	Pygocentrus_nattereri
ENSCING00000002867	ercc3	96	72.251	ENSRNOG00000013180	Ercc3	96	72.251	Rattus_norvegicus
ENSCING00000002867	ercc3	95	72.464	ENSRBIG00000027692	ERCC3	95	72.464	Rhinopithecus_bieti
ENSCING00000002867	ercc3	95	72.464	ENSRROG00000040673	ERCC3	95	72.464	Rhinopithecus_roxellana
ENSCING00000002867	ercc3	92	54.752	YIL143C	SSL2	86	55.020	Saccharomyces_cerevisiae
ENSCING00000002867	ercc3	95	72.200	ENSSBOG00000023079	ERCC3	95	72.200	Saimiri_boliviensis_boliviensis
ENSCING00000002867	ercc3	96	71.634	ENSSHAG00000007423	ERCC3	96	71.634	Sarcophilus_harrisii
ENSCING00000002867	ercc3	96	71.578	ENSSFOG00015012753	ercc3	96	71.578	Scleropages_formosus
ENSCING00000002867	ercc3	95	71.654	ENSSMAG00000011915	ercc3	95	71.654	Scophthalmus_maximus
ENSCING00000002867	ercc3	99	70.138	ENSSDUG00000021181	ercc3	96	71.447	Seriola_dumerili
ENSCING00000002867	ercc3	100	70.162	ENSSLDG00000008744	ercc3	94	71.447	Seriola_lalandi_dorsalis
ENSCING00000002867	ercc3	55	67.198	ENSSARG00000000751	-	85	67.198	Sorex_araneus
ENSCING00000002867	ercc3	89	71.569	ENSSPUG00000015183	ERCC3	91	71.569	Sphenodon_punctatus
ENSCING00000002867	ercc3	96	71.056	ENSSPAG00000004748	ercc3	96	71.056	Stegastes_partitus
ENSCING00000002867	ercc3	96	72.215	ENSSSCG00000015721	ERCC3	95	74.448	Sus_scrofa
ENSCING00000002867	ercc3	96	71.745	ENSTGUG00000004920	-	97	71.875	Taeniopygia_guttata
ENSCING00000002867	ercc3	96	70.980	ENSTRUG00000017185	ercc3	96	70.980	Takifugu_rubripes
ENSCING00000002867	ercc3	96	69.082	ENSTNIG00000005457	ercc3	98	69.883	Tetraodon_nigroviridis
ENSCING00000002867	ercc3	79	73.817	ENSTBEG00000009381	ERCC3	81	73.817	Tupaia_belangeri
ENSCING00000002867	ercc3	66	78.937	ENSUAMG00000009589	-	99	78.719	Ursus_americanus
ENSCING00000002867	ercc3	96	71.953	ENSUMAG00000008361	ERCC3	96	71.953	Ursus_maritimus
ENSCING00000002867	ercc3	91	73.728	ENSVVUG00000010431	ERCC3	99	73.728	Vulpes_vulpes
ENSCING00000002867	ercc3	95	71.822	ENSXETG00000033646	ercc3	95	71.822	Xenopus_tropicalis
ENSCING00000002867	ercc3	95	71.842	ENSXCOG00000001791	ercc3	97	71.373	Xiphophorus_couchianus
ENSCING00000002867	ercc3	95	71.298	ENSXMAG00000003641	ercc3	94	74.080	Xiphophorus_maculatus