EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000002871 (Gene tree)
Gene ID
100185465
Gene Symbol
-
Alias
-
Full Name
U3 small nucleolar ribonucleoprotein protein IMP4-like
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Minus strand
Length
3593 bases
Position
chr1:418813-422405
Accession
100185465
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000005842BrixPF04427.183.2e-3311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000005842-1179XM_002129608ENSCINP00000005842288 (aa)XP_002129644F6TMB1
Gene Model
Click here to download ENSCING00000002871's gene model file
Pathways
Pathway IDPathway NameSource
cin03008Ribosome biogenesis in eukaryotesKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002871's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000002871-7235.238ENSG00000117133RPF18330.272Homo_sapiens
ENSCING00000002871-9666.426ENSAPOG00000005211imp49966.319Acanthochromis_polyacanthus
ENSCING00000002871-7933.621ENSAMEG00000008531RPF19833.621Ailuropoda_melanoleuca
ENSCING00000002871-9663.177ENSAMEG00000002918IMP49863.732Ailuropoda_melanoleuca
ENSCING00000002871-9068.846ENSACIG00000010761imp49968.846Amphilophus_citrinellus
ENSCING00000002871-9666.787ENSAOCG00000019092imp49966.667Amphiprion_ocellaris
ENSCING00000002871-9666.787ENSAPEG00000017240imp49966.667Amphiprion_percula
ENSCING00000002871-9666.426ENSATEG00000012019imp49766.202Anabas_testudineus
ENSCING00000002871-9231.136ENSAPLG00000016382RPF19931.136Anas_platyrhynchos
ENSCING00000002871-10067.361ENSACAG00000005882IMP49967.361Anolis_carolinensis
ENSCING00000002871-9947.719ENSANAG00000026010-9747.719Aotus_nancymaae
ENSCING00000002871-9566.058ENSANAG00000025384-9866.316Aotus_nancymaae
ENSCING00000002871-7233.175ENSANAG00000035829-5933.493Aotus_nancymaae
ENSCING00000002871-9666.787ENSACLG00000006695imp49966.667Astatotilapia_calliptera
ENSCING00000002871-9866.784ENSAMXG00000009639imp49866.784Astyanax_mexicanus
ENSCING00000002871-7234.762ENSBTAG00000008118RPF16034.762Bos_taurus
ENSCING00000002871-9663.899ENSBTAG00000003225IMP49864.561Bos_taurus
ENSCING00000002871-10056.944WBGene00014083ZK795.39756.944Caenorhabditis_elegans
ENSCING00000002871-7236.019WBGene00009711F44G4.15436.019Caenorhabditis_elegans
ENSCING00000002871-9566.058ENSCJAG00000004623IMP49866.316Callithrix_jacchus
ENSCING00000002871-9464.815ENSCAFG00000031902IMP49864.912Canis_familiaris
ENSCING00000002871-7234.762ENSCAFG00000020311RPF16034.762Canis_familiaris
ENSCING00000002871-7234.762ENSCAFG00020014296RPF16034.762Canis_lupus_dingo
ENSCING00000002871-8865.354ENSCAFG00020003191-9565.354Canis_lupus_dingo
ENSCING00000002871-7234.762ENSCHIG00000012566-6034.762Capra_hircus
ENSCING00000002871-9664.130ENSCHIG00000027227IMP49864.561Capra_hircus
ENSCING00000002871-8758.167ENSTSYG00000010060IMP49158.167Carlito_syrichta
ENSCING00000002871-7234.762ENSTSYG00000009961RPF18330.272Carlito_syrichta
ENSCING00000002871-5065.517ENSCAPG00000013416IMP49866.667Cavia_aperea
ENSCING00000002871-6633.505ENSCAPG00000011740RPF19033.505Cavia_aperea
ENSCING00000002871-6965.517ENSCPOG00000025730IMP49965.517Cavia_porcellus
ENSCING00000002871-9665.343ENSCCAG00000021659IMP49865.965Cebus_capucinus
ENSCING00000002871-7234.762ENSCATG00000010531RPF16734.762Cercocebus_atys
ENSCING00000002871-9566.058ENSCATG00000034658IMP49866.316Cercocebus_atys
ENSCING00000002871-7234.762ENSCLAG00000007607RPF18330.034Chinchilla_lanigera
ENSCING00000002871-9664.982ENSCLAG00000003199IMP49865.614Chinchilla_lanigera
ENSCING00000002871-9565.693ENSCSAG00000016928IMP49865.965Chlorocebus_sabaeus
ENSCING00000002871-9664.982ENSCHOG00000009212IMP49865.614Choloepus_hoffmanni
ENSCING00000002871-7233.810ENSCHOG00000003320-6433.810Choloepus_hoffmanni
ENSCING00000002871-5766.667ENSCPBG00000002194IMP46766.667Chrysemys_picta_bellii
ENSCING00000002871-7238.756ENSCING00000007514-5938.756Ciona_intestinalis
ENSCING00000002871-7236.842ENSCSAVG00000003642-10035.407Ciona_savignyi
ENSCING00000002871-10091.319ENSCSAVG00000000625-10091.319Ciona_savignyi
ENSCING00000002871-9954.035ENSCANG00000037489IMP49854.035Colobus_angolensis_palliatus
ENSCING00000002871-8459.917ENSCANG00000034095-8259.917Colobus_angolensis_palliatus
ENSCING00000002871-9665.704ENSCGRG00001010494Imp49866.316Cricetulus_griseus_chok1gshd
ENSCING00000002871-7234.762ENSCGRG00000008483Rpf17134.762Cricetulus_griseus_crigri
ENSCING00000002871-9665.704ENSCGRG00000017820Imp49866.316Cricetulus_griseus_crigri
ENSCING00000002871-10063.542ENSCSEG00000016100imp49963.542Cynoglossus_semilaevis
ENSCING00000002871-9664.748ENSCVAG00000011844imp49964.583Cyprinodon_variegatus
ENSCING00000002871-10065.625ENSDARG00000054540imp49965.625Danio_rerio
ENSCING00000002871-9664.621ENSDNOG00000019221IMP49065.263Dasypus_novemcinctus
ENSCING00000002871-9665.343ENSDORG00000010685Imp49865.845Dipodomys_ordii
ENSCING00000002871-8332.510FBgn0032408CG67127331.104Drosophila_melanogaster
ENSCING00000002871-9954.737FBgn0039274CG119209554.737Drosophila_melanogaster
ENSCING00000002871-7767.117ENSETEG00000016200IMP49967.117Echinops_telfairi
ENSCING00000002871-7234.762ENSEASG00005014158RPF16034.762Equus_asinus_asinus
ENSCING00000002871-9664.982ENSEASG00005007002IMP49865.614Equus_asinus_asinus
ENSCING00000002871-9664.982ENSECAG00000009529IMP49865.614Equus_caballus
ENSCING00000002871-7234.762ENSECAG00000019661RPF16034.762Equus_caballus
ENSCING00000002871-7233.649ENSEEUG00000014950-9233.649Erinaceus_europaeus
ENSCING00000002871-7934.052ENSEEUG00000001097-6434.052Erinaceus_europaeus
ENSCING00000002871-9663.899ENSEEUG00000006342IMP49864.561Erinaceus_europaeus
ENSCING00000002871-10065.517ENSELUG00000004487imp49966.319Esox_lucius
ENSCING00000002871-9663.177ENSFCAG00000031008IMP49863.860Felis_catus
ENSCING00000002871-7235.714ENSFALG00000006037RPF17830.272Ficedula_albicollis
ENSCING00000002871-9665.343ENSFDAG00000014358IMP49965.625Fukomys_damarensis
ENSCING00000002871-7235.238ENSFDAG00000011922RPF18330.375Fukomys_damarensis
ENSCING00000002871-9664.982ENSFHEG00000022246imp49964.931Fundulus_heteroclitus
ENSCING00000002871-7235.238ENSGALG00000008796RPF16333.488Gallus_gallus
ENSCING00000002871-10053.472ENSGALG00000029152IMP49953.472Gallus_gallus
ENSCING00000002871-6564.706ENSGAFG00000013585imp48064.706Gambusia_affinis
ENSCING00000002871-9664.982ENSGACG00000005210imp49965.278Gasterosteus_aculeatus
ENSCING00000002871-9461.481ENSGAGG00000017003IMP49961.458Gopherus_agassizii
ENSCING00000002871-7235.238ENSGGOG00000015862RPF18330.272Gorilla_gorilla
ENSCING00000002871-9665.704ENSGGOG00000001595IMP49866.316Gorilla_gorilla
ENSCING00000002871-9666.787ENSHBUG00000014205imp49966.667Haplochromis_burtoni
ENSCING00000002871-9665.704ENSHGLG00000017709IMP49866.316Heterocephalus_glaber_female
ENSCING00000002871-9665.704ENSHGLG00100015453IMP49866.316Heterocephalus_glaber_male
ENSCING00000002871-9666.426ENSHCOG00000001797imp49266.319Hippocampus_comes
ENSCING00000002871-10068.056ENSIPUG00000019326Imp49968.056Ictalurus_punctatus
ENSCING00000002871-9663.538ENSSTOG00000003373IMP49864.211Ictidomys_tridecemlineatus
ENSCING00000002871-9664.982ENSJJAG00000010983-9865.493Jaculus_jaculus
ENSCING00000002871-9651.449ENSJJAG00000016616-9751.449Jaculus_jaculus
ENSCING00000002871-9666.787ENSKMAG00000010490imp49966.667Kryptolebias_marmoratus
ENSCING00000002871-9330.258ENSKMAG00000010792rpf17931.047Kryptolebias_marmoratus
ENSCING00000002871-9667.148ENSLBEG00000001068imp49967.014Labrus_bergylta
ENSCING00000002871-9668.592ENSLACG00000010815IMP49968.750Latimeria_chalumnae
ENSCING00000002871-10065.517ENSLOCG00000014398imp49965.517Lepisosteus_oculatus
ENSCING00000002871-7234.762ENSLAFG00000007031RPF18330.272Loxodonta_africana
ENSCING00000002871-9562.857ENSLAFG00000011558IMP49863.103Loxodonta_africana
ENSCING00000002871-9566.058ENSMFAG00000045624IMP49866.316Macaca_fascicularis
ENSCING00000002871-9566.058ENSMMUG00000009615IMP49866.316Macaca_mulatta
ENSCING00000002871-9566.058ENSMNEG00000044179IMP49866.316Macaca_nemestrina
ENSCING00000002871-8766.000ENSMLEG00000039076IMP49866.000Mandrillus_leucophaeus
ENSCING00000002871-9168.582ENSMAMG00000019500imp49968.582Mastacembelus_armatus
ENSCING00000002871-7533.180ENSMAMG00000022342rpf17631.579Mastacembelus_armatus
ENSCING00000002871-9666.787ENSMZEG00005003966imp49966.667Maylandia_zebra
ENSCING00000002871-9953.521ENSMGAG00000000778IMP49853.521Meleagris_gallopavo
ENSCING00000002871-7235.714ENSMGAG00000009207RPF19932.463Meleagris_gallopavo
ENSCING00000002871-9664.621ENSMAUG00000021757Imp49865.263Mesocricetus_auratus
ENSCING00000002871-7234.762ENSMICG00000015146-6034.597Microcebus_murinus
ENSCING00000002871-7230.476ENSMICG00000012349-5730.476Microcebus_murinus
ENSCING00000002871-9664.260ENSMICG00000011797IMP49864.912Microcebus_murinus
ENSCING00000002871-9865.018ENSMOCG00000014058Imp49865.263Microtus_ochrogaster
ENSCING00000002871-9360.448ENSMMOG00000009454imp49860.448Mola_mola
ENSCING00000002871-9663.177ENSMODG00000010577IMP49963.415Monodelphis_domestica
ENSCING00000002871-9666.426ENSMALG00000002089imp49966.319Monopterus_albus
ENSCING00000002871-7234.286MGP_CAROLIEiJ_G0025726Rpf18736.719Mus_caroli
ENSCING00000002871-9664.982MGP_CAROLIEiJ_G0014021Imp49865.614Mus_caroli
ENSCING00000002871-9665.343ENSMUSG00000026127Imp49865.965Mus_musculus
ENSCING00000002871-7234.762ENSMUSG00000028187Rpf18637.500Mus_musculus
ENSCING00000002871-7234.762MGP_PahariEiJ_G0027177-8837.500Mus_pahari
ENSCING00000002871-9665.343MGP_PahariEiJ_G0027267Imp49865.965Mus_pahari
ENSCING00000002871-7234.762MGP_SPRETEiJ_G0026679Rpf18737.500Mus_spretus
ENSCING00000002871-9665.343MGP_SPRETEiJ_G0014826Imp49865.965Mus_spretus
ENSCING00000002871-9663.177ENSMPUG00000013257IMP49863.860Mustela_putorius_furo
ENSCING00000002871-7235.238ENSMPUG00000005736-6035.238Mustela_putorius_furo
ENSCING00000002871-9661.131ENSMLUG00000011354IMP49861.724Myotis_lucifugus
ENSCING00000002871-7235.238ENSMLUG00000016028RPF18330.612Myotis_lucifugus
ENSCING00000002871-9665.343ENSNGAG00000013073Imp49865.965Nannospalax_galili
ENSCING00000002871-9666.787ENSNBRG00000012538imp49966.667Neolamprologus_brichardi
ENSCING00000002871-9666.065ENSNLEG00000010574IMP49866.667Nomascus_leucogenys
ENSCING00000002871-7235.238ENSNLEG00000009930RPF19230.272Nomascus_leucogenys
ENSCING00000002871-9462.222ENSMEUG00000008058IMP49961.806Notamacropus_eugenii
ENSCING00000002871-9666.065ENSODEG00000003380IMP49866.667Octodon_degus
ENSCING00000002871-7234.762ENSODEG00000003070-8330.375Octodon_degus
ENSCING00000002871-7233.493ENSODEG00000013517-6833.493Octodon_degus
ENSCING00000002871-9667.148ENSONIG00000010414imp49966.899Oreochromis_niloticus
ENSCING00000002871-9959.589ENSOANG00000014598IMP49959.589Ornithorhynchus_anatinus
ENSCING00000002871-7933.621ENSOANG00000009012-9733.621Ornithorhynchus_anatinus
ENSCING00000002871-7234.762ENSOCUG00000014803RPF16034.762Oryctolagus_cuniculus
ENSCING00000002871-9666.065ENSOCUG00000002845IMP49866.667Oryctolagus_cuniculus
ENSCING00000002871-10067.361ENSORLG00000016710imp49967.361Oryzias_latipes
ENSCING00000002871-10067.014ENSORLG00020017410imp49967.014Oryzias_latipes_hni
ENSCING00000002871-10067.361ENSORLG00015007777imp49967.361Oryzias_latipes_hsok
ENSCING00000002871-10067.708ENSOMEG00000022789imp49967.708Oryzias_melastigma
ENSCING00000002871-9663.604ENSOGAG00000007312IMP49864.138Otolemur_garnettii
ENSCING00000002871-7234.762ENSOARG00000013867RPF16034.762Ovis_aries
ENSCING00000002871-9660.357ENSOARG00000015820IMP49960.825Ovis_aries
ENSCING00000002871-7235.238ENSPPAG00000038610RPF18330.272Pan_paniscus
ENSCING00000002871-9665.343ENSPPAG00000028871IMP49865.965Pan_paniscus
ENSCING00000002871-9663.177ENSPPRG00000010574IMP49863.860Panthera_pardus
ENSCING00000002871-9663.177ENSPTIG00000010892IMP49863.860Panthera_tigris_altaica
ENSCING00000002871-9465.556ENSPTRG00000012451IMP49865.556Pan_troglodytes
ENSCING00000002871-7235.238ENSPTRG00000000901RPF18330.272Pan_troglodytes
ENSCING00000002871-7234.762ENSPANG00000010052RPF18330.137Papio_anubis
ENSCING00000002871-9566.423ENSPANG00000022510IMP49866.667Papio_anubis
ENSCING00000002871-9669.675ENSPKIG00000004119imp49969.792Paramormyrops_kingsleyae
ENSCING00000002871-7234.906ENSPSIG00000017437RPF16334.906Pelodiscus_sinensis
ENSCING00000002871-9965.854ENSPMGG00000023829imp49765.854Periophthalmus_magnuspinnatus
ENSCING00000002871-8732.549ENSPEMG00000023196Rpf18330.272Peromyscus_maniculatus_bairdii
ENSCING00000002871-9664.621ENSPCIG00000027960IMP49964.931Phascolarctos_cinereus
ENSCING00000002871-9664.621ENSPFOG00000003445imp49964.583Poecilia_formosa
ENSCING00000002871-9664.621ENSPLAG00000019505imp49964.583Poecilia_latipinna
ENSCING00000002871-9664.621ENSPMEG00000020377imp49964.583Poecilia_mexicana
ENSCING00000002871-7533.180ENSPMEG00000013163rpf15533.180Poecilia_mexicana
ENSCING00000002871-9663.899ENSPREG00000014067imp49963.889Poecilia_reticulata
ENSCING00000002871-7235.238ENSPPYG00000001206RPF18330.612Pongo_abelii
ENSCING00000002871-9665.704ENSPPYG00000013379IMP49866.316Pongo_abelii
ENSCING00000002871-7464.019ENSPCAG00000010892IMP49964.019Procavia_capensis
ENSCING00000002871-9664.982ENSPCOG00000017902IMP49865.614Propithecus_coquereli
ENSCING00000002871-7234.762ENSPCOG00000022483RPF16034.597Propithecus_coquereli
ENSCING00000002871-9562.774ENSPVAG00000006066IMP49863.158Pteropus_vampyrus
ENSCING00000002871-7234.762ENSPVAG00000003729RPF18330.034Pteropus_vampyrus
ENSCING00000002871-9666.787ENSPNYG00000019489imp49966.667Pundamilia_nyererei
ENSCING00000002871-10067.708ENSPNAG00000010913imp49968.100Pygocentrus_nattereri
ENSCING00000002871-9665.343ENSRNOG00000013285Imp49865.965Rattus_norvegicus
ENSCING00000002871-8759.363ENSRBIG00000018905-9959.363Rhinopithecus_bieti
ENSCING00000002871-9566.423ENSRROG00000031770IMP49866.667Rhinopithecus_roxellana
ENSCING00000002871-9551.825ENSRROG00000043586-9851.825Rhinopithecus_roxellana
ENSCING00000002871-9650.542ENSRROG00000031291-9751.408Rhinopithecus_roxellana
ENSCING00000002871-8031.489YHR088W-7831.489Saccharomyces_cerevisiae
ENSCING00000002871-10050.512YNL075W-10050.512Saccharomyces_cerevisiae
ENSCING00000002871-9665.704ENSSBOG00000025841IMP49866.316Saimiri_boliviensis_boliviensis
ENSCING00000002871-6633.505ENSSBOG00000023599-6733.505Saimiri_boliviensis_boliviensis
ENSCING00000002871-9960.702ENSSHAG00000015070-9860.702Sarcophilus_harrisii
ENSCING00000002871-9663.538ENSSHAG00000008267-9963.889Sarcophilus_harrisii
ENSCING00000002871-7234.286ENSSHAG00000017559RPF17634.286Sarcophilus_harrisii
ENSCING00000002871-7848.673ENSSHAG00000016855-9648.673Sarcophilus_harrisii
ENSCING00000002871-9667.509ENSSFOG00015023293imp49967.708Scleropages_formosus
ENSCING00000002871-8865.613ENSSMAG00000012628imp48965.530Scophthalmus_maximus
ENSCING00000002871-9667.870ENSSDUG00000006630imp49967.708Seriola_dumerili
ENSCING00000002871-9667.870ENSSLDG00000012188imp49967.708Seriola_lalandi_dorsalis
ENSCING00000002871-6165.289ENSSARG00000002505-6366.102Sorex_araneus
ENSCING00000002871-7234.762ENSSARG00000011380RPF16034.762Sorex_araneus
ENSCING00000002871-9667.148ENSSPAG00000021089imp49967.014Stegastes_partitus
ENSCING00000002871-9664.260ENSSSCG00000015734IMP49864.912Sus_scrofa
ENSCING00000002871-7234.762ENSSSCG00000022145RPF16034.762Sus_scrofa
ENSCING00000002871-7236.190ENSTGUG00000006591RPF19030.034Taeniopygia_guttata
ENSCING00000002871-9666.065ENSTRUG00000003784imp49965.972Takifugu_rubripes
ENSCING00000002871-8331.667ENSTNIG00000015558rpf17830.000Tetraodon_nigroviridis
ENSCING00000002871-9666.065ENSTNIG00000010594imp49965.854Tetraodon_nigroviridis
ENSCING00000002871-7233.649ENSTBEG00000010766-9233.649Tupaia_belangeri
ENSCING00000002871-7233.649ENSTBEG00000002870-9233.649Tupaia_belangeri
ENSCING00000002871-7233.649ENSTBEG00000004594-9233.649Tupaia_belangeri
ENSCING00000002871-7233.649ENSTBEG00000002725-9233.649Tupaia_belangeri
ENSCING00000002871-6335.326ENSTBEG00000016624-10035.326Tupaia_belangeri
ENSCING00000002871-6633.505ENSTBEG00000001587-9833.505Tupaia_belangeri
ENSCING00000002871-7233.649ENSTBEG00000002036-9233.649Tupaia_belangeri
ENSCING00000002871-7233.649ENSTBEG00000015252-9233.649Tupaia_belangeri
ENSCING00000002871-6634.021ENSTBEG00000013600-5534.021Tupaia_belangeri
ENSCING00000002871-8031.330ENSTBEG00000012128-7131.330Tupaia_belangeri
ENSCING00000002871-6534.211ENSTBEG00000009578-10034.211Tupaia_belangeri
ENSCING00000002871-7233.649ENSTBEG00000012664-9233.649Tupaia_belangeri
ENSCING00000002871-7233.649ENSTBEG00000009181-9233.649Tupaia_belangeri
ENSCING00000002871-7133.493ENSTBEG00000006669-10033.493Tupaia_belangeri
ENSCING00000002871-7234.286ENSTBEG00000013368-6334.286Tupaia_belangeri
ENSCING00000002871-7233.649ENSTBEG00000001224-9233.649Tupaia_belangeri
ENSCING00000002871-7233.649ENSTBEG00000000334-9233.649Tupaia_belangeri
ENSCING00000002871-9664.621ENSTBEG00000009881IMP49865.263Tupaia_belangeri
ENSCING00000002871-7233.649ENSTBEG00000002184-9233.649Tupaia_belangeri
ENSCING00000002871-5234.868ENSTBEG00000006259-5534.868Tupaia_belangeri
ENSCING00000002871-9664.982ENSTTRG00000012590IMP49865.614Tursiops_truncatus
ENSCING00000002871-7235.238ENSTTRG00000000789RPF18330.612Tursiops_truncatus
ENSCING00000002871-9663.538ENSUAMG00000027326IMP49864.211Ursus_americanus
ENSCING00000002871-9663.538ENSUMAG00000013874IMP49864.211Ursus_maritimus
ENSCING00000002871-7235.238ENSVPAG00000005882RPF18330.612Vicugna_pacos
ENSCING00000002871-9464.444ENSVVUG00000005007IMP49864.561Vulpes_vulpes
ENSCING00000002871-7532.127ENSVVUG00000024183-6532.127Vulpes_vulpes
ENSCING00000002871-7433.023ENSVVUG00000017435-6233.023Vulpes_vulpes
ENSCING00000002871-8662.500ENSXETG00000016795imp410062.598Xenopus_tropicalis
ENSCING00000002871-8464.228ENSXCOG00000014886imp410064.062Xiphophorus_couchianus
ENSCING00000002871-9664.621ENSXMAG00000004915imp49964.583Xiphophorus_maculatus

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