EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000002994 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4530 bases
Position: chr11:1893838-1898367
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006094	ResIII	PF04851.15	2e-21	1	1
ENSCINP00000006094	DEAD	PF00270.29	5.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006094	-	875	-	ENSCINP00000006094	273 (aa)	-	F6QXW9

Gene Model

Click here to download ENSCING00000002994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000002994's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000002994	-	100	59.341	ENSAPOG00000014274	-	62	59.341	Acanthochromis_polyacanthus
ENSCING00000002994	-	99	55.351	ENSAOCG00000005964	-	98	55.351	Amphiprion_ocellaris
ENSCING00000002994	-	99	55.351	ENSAPEG00000018344	-	98	55.351	Amphiprion_percula
ENSCING00000002994	-	99	60.370	ENSBTAG00000002612	FANCM	72	60.148	Bos_taurus
ENSCING00000002994	-	99	55.515	ENSDARG00000112136	CABZ01079748.1	90	55.515	Danio_rerio
ENSCING00000002994	-	86	60.000	ENSEBUG00000014849	-	61	60.000	Eptatretus_burgeri
ENSCING00000002994	-	96	60.456	ENSFHEG00000006371	-	59	61.803	Fundulus_heteroclitus
ENSCING00000002994	-	99	56.410	ENSGAFG00000002104	-	98	56.410	Gambusia_affinis
ENSCING00000002994	-	91	56.225	ENSGAGG00000007068	-	65	55.952	Gopherus_agassizii
ENSCING00000002994	-	100	59.341	ENSIPUG00000014629	fancm	58	63.404	Ictalurus_punctatus
ENSCING00000002994	-	99	59.259	ENSKMAG00000009391	-	64	59.259	Kryptolebias_marmoratus
ENSCING00000002994	-	99	60.148	ENSMALG00000013187	-	62	60.148	Monopterus_albus
ENSCING00000002994	-	98	56.180	ENSNBRG00000024095	-	98	56.180	Neolamprologus_brichardi
ENSCING00000002994	-	99	55.882	ENSPKIG00000000861	-	62	55.882	Paramormyrops_kingsleyae
ENSCING00000002994	-	98	55.597	ENSPMGG00000010830	-	98	55.597	Periophthalmus_magnuspinnatus
ENSCING00000002994	-	66	63.536	ENSPMAG00000003340	-	66	63.536	Petromyzon_marinus
ENSCING00000002994	-	98	56.180	ENSPNYG00000018775	-	98	56.180	Pundamilia_nyererei
ENSCING00000002994	-	97	56.391	ENSSFOG00015017948	-	98	56.391	Scleropages_formosus
ENSCING00000002994	-	99	59.259	ENSSMAG00000019903	-	65	58.736	Scophthalmus_maximus
ENSCING00000002994	-	99	60.741	ENSSDUG00000016682	-	73	61.217	Seriola_dumerili
ENSCING00000002994	-	87	62.025	ENSSPAG00000016930	-	73	62.128	Stegastes_partitus
ENSCING00000002994	-	100	58.242	ENSXETG00000003046	fancm	60	58.242	Xenopus_tropicalis
ENSCING00000002994	-	93	59.231	ENSXCOG00000004854	-	81	59.231	Xiphophorus_couchianus