EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003144 (Gene tree)
Gene ID: 100175768
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 939 bases
Position: chr7:259698-260636
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006378	Ribosomal_L4	PF00573.22	1.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006378	-	939	-	ENSCINP00000006378	313 (aa)	-	F6R725

Gene Model

Click here to download ENSCING00000003144's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003144's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003144	-	75	39.241	ENSG00000105364	MRPL4	98	43.590	Homo_sapiens
ENSCING00000003144	-	95	34.667	ENSAPOG00000010156	mrpl4	95	34.667	Acanthochromis_polyacanthus
ENSCING00000003144	-	78	37.551	ENSAMEG00000011808	MRPL4	83	37.551	Ailuropoda_melanoleuca
ENSCING00000003144	-	74	38.723	ENSACIG00000011523	mrpl4	88	36.900	Amphilophus_citrinellus
ENSCING00000003144	-	92	34.364	ENSAOCG00000018507	mrpl4	87	34.364	Amphiprion_ocellaris
ENSCING00000003144	-	95	34.219	ENSAPEG00000006208	mrpl4	95	34.219	Amphiprion_percula
ENSCING00000003144	-	95	36.000	ENSATEG00000021694	mrpl4	95	36.000	Anabas_testudineus
ENSCING00000003144	-	84	38.403	ENSACAG00000008232	MRPL4	89	38.403	Anolis_carolinensis
ENSCING00000003144	-	79	38.000	ENSANAG00000025428	MRPL4	87	38.000	Aotus_nancymaae
ENSCING00000003144	-	87	36.029	ENSACLG00000017038	mrpl4	89	36.029	Astatotilapia_calliptera
ENSCING00000003144	-	89	37.634	ENSAMXG00000002236	mrpl4	90	37.634	Astyanax_mexicanus
ENSCING00000003144	-	67	41.038	WBGene00020717	mrpl-4	71	41.038	Caenorhabditis_elegans
ENSCING00000003144	-	79	38.153	ENSCJAG00000005764	MRPL4	85	38.153	Callithrix_jacchus
ENSCING00000003144	-	75	40.000	ENSCAFG00000017881	MRPL4	80	40.000	Canis_familiaris
ENSCING00000003144	-	75	40.000	ENSCAFG00020024405	MRPL4	78	40.000	Canis_lupus_dingo
ENSCING00000003144	-	75	39.241	ENSCHIG00000000516	MRPL4	81	39.241	Capra_hircus
ENSCING00000003144	-	80	37.450	ENSTSYG00000034805	MRPL4	85	37.450	Carlito_syrichta
ENSCING00000003144	-	60	39.474	ENSCAPG00000000036	MRPL4	93	39.474	Cavia_aperea
ENSCING00000003144	-	77	37.190	ENSCPOG00000006506	MRPL4	82	37.190	Cavia_porcellus
ENSCING00000003144	-	79	38.554	ENSCLAG00000004552	MRPL4	85	38.554	Chinchilla_lanigera
ENSCING00000003144	-	75	39.662	ENSCSAG00000007362	MRPL4	79	39.662	Chlorocebus_sabaeus
ENSCING00000003144	-	83	39.245	ENSCPBG00000005432	MRPL4	99	40.551	Chrysemys_picta_bellii
ENSCING00000003144	-	99	64.194	ENSCSAVG00000007005	-	100	64.194	Ciona_savignyi
ENSCING00000003144	-	79	39.442	ENSCGRG00001013642	Mrpl4	85	39.442	Cricetulus_griseus_chok1gshd
ENSCING00000003144	-	79	39.442	ENSCGRG00000012922	Mrpl4	85	39.442	Cricetulus_griseus_crigri
ENSCING00000003144	-	81	37.109	ENSCSEG00000020580	mrpl4	99	35.032	Cynoglossus_semilaevis
ENSCING00000003144	-	99	38.658	ENSDARG00000058824	mrpl4	99	38.658	Danio_rerio
ENSCING00000003144	-	73	37.826	ENSDNOG00000044263	-	85	36.179	Dasypus_novemcinctus
ENSCING00000003144	-	79	33.871	ENSDNOG00000010139	-	87	33.871	Dasypus_novemcinctus
ENSCING00000003144	-	77	37.295	ENSDORG00000003723	Mrpl4	94	37.295	Dipodomys_ordii
ENSCING00000003144	-	76	37.238	FBgn0001995	mRpL4	80	37.238	Drosophila_melanogaster
ENSCING00000003144	-	75	40.000	ENSETEG00000002009	MRPL4	79	39.831	Echinops_telfairi
ENSCING00000003144	-	73	38.528	ENSEBUG00000016597	mrpl4	75	38.528	Eptatretus_burgeri
ENSCING00000003144	-	98	35.599	ENSEASG00005010556	MRPL4	98	35.599	Equus_asinus_asinus
ENSCING00000003144	-	79	38.956	ENSECAG00000017013	MRPL4	83	38.956	Equus_caballus
ENSCING00000003144	-	91	36.364	ENSELUG00000010463	mrpl4	94	36.364	Esox_lucius
ENSCING00000003144	-	70	35.160	ENSFCAG00000043071	MRPL4	84	35.160	Felis_catus
ENSCING00000003144	-	69	37.963	ENSFDAG00000001936	MRPL4	96	37.963	Fukomys_damarensis
ENSCING00000003144	-	91	35.192	ENSFHEG00000003126	mrpl4	94	35.192	Fundulus_heteroclitus
ENSCING00000003144	-	91	36.111	ENSGMOG00000007229	mrpl4	100	36.111	Gadus_morhua
ENSCING00000003144	-	91	36.111	ENSGAFG00000018136	mrpl4	94	36.111	Gambusia_affinis
ENSCING00000003144	-	78	39.184	ENSGACG00000019808	mrpl4	99	35.256	Gasterosteus_aculeatus
ENSCING00000003144	-	82	39.015	ENSGAGG00000018010	MRPL4	85	39.326	Gopherus_agassizii
ENSCING00000003144	-	75	39.241	ENSGGOG00000036529	-	76	39.241	Gorilla_gorilla
ENSCING00000003144	-	87	36.131	ENSHBUG00000006332	mrpl4	89	36.131	Haplochromis_burtoni
ENSCING00000003144	-	79	37.450	ENSHGLG00000007839	MRPL4	84	37.450	Heterocephalus_glaber_female
ENSCING00000003144	-	84	36.704	ENSHGLG00100002720	MRPL4	95	36.842	Heterocephalus_glaber_male
ENSCING00000003144	-	96	36.093	ENSHCOG00000002016	mrpl4	99	37.171	Hippocampus_comes
ENSCING00000003144	-	99	35.144	ENSIPUG00000011705	mrpl4	96	35.144	Ictalurus_punctatus
ENSCING00000003144	-	55	41.954	ENSSTOG00000030121	MRPL4	86	41.954	Ictidomys_tridecemlineatus
ENSCING00000003144	-	79	38.956	ENSJJAG00000010573	Mrpl4	85	38.956	Jaculus_jaculus
ENSCING00000003144	-	91	36.237	ENSKMAG00000012769	mrpl4	93	36.237	Kryptolebias_marmoratus
ENSCING00000003144	-	87	35.897	ENSLBEG00000000848	mrpl4	89	35.897	Labrus_bergylta
ENSCING00000003144	-	97	37.143	ENSLACG00000009255	MRPL4	94	37.143	Latimeria_chalumnae
ENSCING00000003144	-	99	34.494	ENSLOCG00000016632	mrpl4	99	34.494	Lepisosteus_oculatus
ENSCING00000003144	-	75	38.723	ENSLAFG00000015366	MRPL4	80	38.723	Loxodonta_africana
ENSCING00000003144	-	75	40.084	ENSMFAG00000003526	MRPL4	75	40.084	Macaca_fascicularis
ENSCING00000003144	-	75	40.084	ENSMMUG00000001219	MRPL4	79	40.084	Macaca_mulatta
ENSCING00000003144	-	75	40.084	ENSMNEG00000040746	MRPL4	79	40.084	Macaca_nemestrina
ENSCING00000003144	-	75	31.646	ENSMLEG00000041712	MRPL4	78	31.646	Mandrillus_leucophaeus
ENSCING00000003144	-	74	38.362	ENSMAMG00000001736	mrpl4	92	35.789	Mastacembelus_armatus
ENSCING00000003144	-	87	36.029	ENSMZEG00005005809	mrpl4	89	36.029	Maylandia_zebra
ENSCING00000003144	-	75	38.983	ENSMAUG00000013451	Mrpl4	82	38.983	Mesocricetus_auratus
ENSCING00000003144	-	80	38.340	ENSMICG00000010267	MRPL4	84	38.340	Microcebus_murinus
ENSCING00000003144	-	75	38.559	ENSMOCG00000014755	Mrpl4	81	38.559	Microtus_ochrogaster
ENSCING00000003144	-	95	30.565	ENSMMOG00000013673	mrpl4	95	30.667	Mola_mola
ENSCING00000003144	-	75	38.034	ENSMODG00000005476	MRPL4	78	38.034	Monodelphis_domestica
ENSCING00000003144	-	93	34.471	ENSMALG00000002391	mrpl4	94	34.471	Monopterus_albus
ENSCING00000003144	-	75	39.407	MGP_CAROLIEiJ_G0031854	Mrpl4	80	39.407	Mus_caroli
ENSCING00000003144	-	79	38.800	ENSMUSG00000003299	Mrpl4	85	38.800	Mus_musculus
ENSCING00000003144	-	79	37.849	MGP_PahariEiJ_G0014720	Mrpl4	85	37.849	Mus_pahari
ENSCING00000003144	-	79	38.800	MGP_SPRETEiJ_G0032978	Mrpl4	85	38.800	Mus_spretus
ENSCING00000003144	-	78	37.959	ENSMPUG00000006825	MRPL4	83	37.959	Mustela_putorius_furo
ENSCING00000003144	-	80	38.247	ENSMLUG00000012280	MRPL4	98	38.247	Myotis_lucifugus
ENSCING00000003144	-	79	38.039	ENSNGAG00000014705	Mrpl4	88	37.052	Nannospalax_galili
ENSCING00000003144	-	87	36.397	ENSNBRG00000004804	mrpl4	89	36.397	Neolamprologus_brichardi
ENSCING00000003144	-	65	30.542	ENSNLEG00000012155	-	64	30.542	Nomascus_leucogenys
ENSCING00000003144	-	80	31.496	ENSMEUG00000002199	MRPL4	98	31.496	Notamacropus_eugenii
ENSCING00000003144	-	75	39.407	ENSOPRG00000005735	MRPL4	79	39.407	Ochotona_princeps
ENSCING00000003144	-	79	38.153	ENSODEG00000016194	MRPL4	86	38.153	Octodon_degus
ENSCING00000003144	-	91	37.113	ENSONIG00000000136	mrpl4	94	37.113	Oreochromis_niloticus
ENSCING00000003144	-	66	40.670	ENSOANG00000013891	MRPL4	100	40.670	Ornithorhynchus_anatinus
ENSCING00000003144	-	74	39.655	ENSORLG00000000085	mrpl4	92	36.000	Oryzias_latipes
ENSCING00000003144	-	74	39.224	ENSORLG00020020476	mrpl4	95	35.333	Oryzias_latipes_hni
ENSCING00000003144	-	74	39.224	ENSORLG00015020892	mrpl4	95	35.667	Oryzias_latipes_hsok
ENSCING00000003144	-	79	37.548	ENSOGAG00000011051	MRPL4	88	37.548	Otolemur_garnettii
ENSCING00000003144	-	69	40.553	ENSOARG00000015602	MRPL4	78	39.381	Ovis_aries
ENSCING00000003144	-	75	39.241	ENSPPAG00000041740	-	76	39.241	Pan_paniscus
ENSCING00000003144	-	67	35.849	ENSPPRG00000004312	MRPL4	83	35.849	Panthera_pardus
ENSCING00000003144	-	70	35.160	ENSPTIG00000010912	MRPL4	84	35.160	Panthera_tigris_altaica
ENSCING00000003144	-	75	39.241	ENSPTRG00000010462	MRPL4	76	39.241	Pan_troglodytes
ENSCING00000003144	-	75	39.662	ENSPANG00000001265	MRPL4	75	39.662	Papio_anubis
ENSCING00000003144	-	99	36.422	ENSPKIG00000008086	mrpl4	99	36.422	Paramormyrops_kingsleyae
ENSCING00000003144	-	85	36.567	ENSPMGG00000002329	mrpl4	94	35.610	Periophthalmus_magnuspinnatus
ENSCING00000003144	-	75	39.662	ENSPEMG00000017474	Mrpl4	83	39.662	Peromyscus_maniculatus_bairdii
ENSCING00000003144	-	81	39.130	ENSPMAG00000007691	mrpl4	99	39.130	Petromyzon_marinus
ENSCING00000003144	-	91	36.364	ENSPFOG00000013329	mrpl4	94	36.458	Poecilia_formosa
ENSCING00000003144	-	91	36.364	ENSPLAG00000012864	mrpl4	94	36.458	Poecilia_latipinna
ENSCING00000003144	-	91	36.364	ENSPMEG00000004937	mrpl4	94	36.458	Poecilia_mexicana
ENSCING00000003144	-	96	35.526	ENSPREG00000021621	mrpl4	100	36.364	Poecilia_reticulata
ENSCING00000003144	-	75	38.819	ENSPPYG00000009547	MRPL4	76	38.819	Pongo_abelii
ENSCING00000003144	-	56	37.968	ENSPCAG00000002385	MRPL4	79	37.968	Procavia_capensis
ENSCING00000003144	-	78	35.102	ENSPCOG00000016733	MRPL4	82	35.102	Propithecus_coquereli
ENSCING00000003144	-	88	35.636	ENSPNYG00000023505	mrpl4	93	35.636	Pundamilia_nyererei
ENSCING00000003144	-	99	35.256	ENSPNAG00000011785	mrpl4	88	35.256	Pygocentrus_nattereri
ENSCING00000003144	-	75	38.983	ENSRNOG00000020659	Mrpl4	80	38.983	Rattus_norvegicus
ENSCING00000003144	-	60	42.632	ENSRBIG00000032283	-	99	39.645	Rhinopithecus_bieti
ENSCING00000003144	-	75	39.662	ENSRROG00000003982	MRPL4	80	39.662	Rhinopithecus_roxellana
ENSCING00000003144	-	75	37.975	ENSSBOG00000020666	MRPL4	80	37.975	Saimiri_boliviensis_boliviensis
ENSCING00000003144	-	84	36.502	ENSSHAG00000008539	MRPL4	88	36.502	Sarcophilus_harrisii
ENSCING00000003144	-	95	35.117	ENSSFOG00015003308	mrpl4	94	35.117	Scleropages_formosus
ENSCING00000003144	-	78	36.992	ENSSMAG00000021118	mrpl4	99	33.651	Scophthalmus_maximus
ENSCING00000003144	-	95	34.667	ENSSDUG00000002078	mrpl4	95	34.667	Seriola_dumerili
ENSCING00000003144	-	95	34.333	ENSSLDG00000015083	mrpl4	95	34.333	Seriola_lalandi_dorsalis
ENSCING00000003144	-	87	38.095	ENSSPAG00000010120	mrpl4	89	38.095	Stegastes_partitus
ENSCING00000003144	-	82	37.838	ENSSSCG00000013656	MRPL4	94	37.838	Sus_scrofa
ENSCING00000003144	-	95	34.667	ENSTRUG00000008532	mrpl4	95	34.667	Takifugu_rubripes
ENSCING00000003144	-	76	39.331	ENSTNIG00000003265	mrpl4	99	35.144	Tetraodon_nigroviridis
ENSCING00000003144	-	64	35.961	ENSTBEG00000006336	MRPL4	82	35.961	Tupaia_belangeri
ENSCING00000003144	-	78	35.510	ENSTTRG00000009532	MRPL4	79	35.510	Tursiops_truncatus
ENSCING00000003144	-	68	34.419	ENSUAMG00000020392	MRPL4	70	34.419	Ursus_americanus
ENSCING00000003144	-	78	37.551	ENSUMAG00000025105	MRPL4	83	37.551	Ursus_maritimus
ENSCING00000003144	-	75	38.723	ENSVVUG00000028961	MRPL4	80	38.723	Vulpes_vulpes
ENSCING00000003144	-	91	37.153	ENSXETG00000022060	mrpl4	98	36.513	Xenopus_tropicalis
ENSCING00000003144	-	91	35.517	ENSXCOG00000011438	mrpl4	94	35.517	Xiphophorus_couchianus
ENSCING00000003144	-	91	36.458	ENSXMAG00000030102	mrpl4	97	35.517	Xiphophorus_maculatus