EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003163 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2361 bases
Position: chrHT000075.1:128837-131197
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006440	GTP_EFTU	PF00009.27	2.1e-52	1	1
ENSCINP00000006440	MMR_HSR1	PF01926.23	3.8e-05	1	1
ENSCINP00000006440	GTP_EFTU_D2	PF03144.25	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006440	-	1875	-	ENSCINP00000006440	625 (aa)	-	F6QIK7

Gene Model

Click here to download ENSCING00000003163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003163's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003163	-	100	56.390	ENSG00000151806	GUF1	91	56.390	Homo_sapiens
ENSCING00000003163	-	99	52.827	ENSAPOG00000000402	guf1	96	49.435	Acanthochromis_polyacanthus
ENSCING00000003163	-	99	56.866	ENSAMEG00000016084	GUF1	91	56.866	Ailuropoda_melanoleuca
ENSCING00000003163	-	99	51.535	ENSACIG00000005666	guf1	90	51.535	Amphilophus_citrinellus
ENSCING00000003163	-	99	52.666	ENSAOCG00000006219	guf1	90	52.666	Amphiprion_ocellaris
ENSCING00000003163	-	99	52.666	ENSAPEG00000008166	guf1	90	52.666	Amphiprion_percula
ENSCING00000003163	-	99	54.120	ENSATEG00000018199	guf1	99	51.540	Anabas_testudineus
ENSCING00000003163	-	99	56.058	ENSAPLG00000009504	GUF1	90	56.058	Anas_platyrhynchos
ENSCING00000003163	-	99	53.635	ENSACAG00000007056	GUF1	91	53.635	Anolis_carolinensis
ENSCING00000003163	-	97	56.486	ENSANAG00000010773	GUF1	100	53.205	Aotus_nancymaae
ENSCING00000003163	-	99	53.796	ENSACLG00000022239	guf1	99	50.567	Astatotilapia_calliptera
ENSCING00000003163	-	84	55.429	ENSAMXG00000005871	guf1	82	55.429	Astyanax_mexicanus
ENSCING00000003163	-	99	56.058	ENSBTAG00000000285	GUF1	81	56.058	Bos_taurus
ENSCING00000003163	-	99	43.740	WBGene00022862	ZK1236.1	95	43.740	Caenorhabditis_elegans
ENSCING00000003163	-	100	55.911	ENSCJAG00000019056	-	100	52.724	Callithrix_jacchus
ENSCING00000003163	-	99	56.726	ENSCAFG00000001850	GUF1	99	56.726	Canis_familiaris
ENSCING00000003163	-	99	56.866	ENSCAFG00020003101	GUF1	96	56.866	Canis_lupus_dingo
ENSCING00000003163	-	99	56.058	ENSCHIG00000010231	GUF1	94	56.058	Capra_hircus
ENSCING00000003163	-	99	57.027	ENSTSYG00000010907	GUF1	99	53.809	Carlito_syrichta
ENSCING00000003163	-	99	50.647	ENSCAPG00000014980	GUF1	97	59.036	Cavia_aperea
ENSCING00000003163	-	97	56.931	ENSCPOG00000014267	GUF1	94	56.931	Cavia_porcellus
ENSCING00000003163	-	100	55.591	ENSCCAG00000025409	GUF1	100	52.404	Cebus_capucinus
ENSCING00000003163	-	100	56.070	ENSCATG00000040932	GUF1	100	52.404	Cercocebus_atys
ENSCING00000003163	-	99	56.311	ENSCLAG00000007505	GUF1	98	59.623	Chinchilla_lanigera
ENSCING00000003163	-	100	56.230	ENSCSAG00000017118	GUF1	92	56.230	Chlorocebus_sabaeus
ENSCING00000003163	-	99	54.428	ENSCHOG00000001355	GUF1	91	54.428	Choloepus_hoffmanni
ENSCING00000003163	-	99	54.766	ENSCPBG00000025668	GUF1	91	54.766	Chrysemys_picta_bellii
ENSCING00000003163	-	99	80.614	ENSCSAVG00000004563	-	95	80.614	Ciona_savignyi
ENSCING00000003163	-	100	55.751	ENSCANG00000030205	GUF1	100	52.564	Colobus_angolensis_palliatus
ENSCING00000003163	-	99	56.472	ENSCGRG00001015008	Guf1	92	58.955	Cricetulus_griseus_chok1gshd
ENSCING00000003163	-	84	57.333	ENSCGRG00000000314	Guf1	96	57.333	Cricetulus_griseus_crigri
ENSCING00000003163	-	99	51.212	ENSCSEG00000014139	guf1	90	51.212	Cynoglossus_semilaevis
ENSCING00000003163	-	99	50.889	ENSCVAG00000021129	guf1	99	50.889	Cyprinodon_variegatus
ENSCING00000003163	-	99	53.958	ENSDARG00000029088	guf1	90	53.958	Danio_rerio
ENSCING00000003163	-	99	53.859	ENSDNOG00000007345	GUF1	91	53.859	Dasypus_novemcinctus
ENSCING00000003163	-	99	50.809	ENSDORG00000005730	Guf1	92	60.075	Dipodomys_ordii
ENSCING00000003163	-	99	44.677	FBgn0024182	waw	87	44.677	Drosophila_melanogaster
ENSCING00000003163	-	86	66.845	ENSETEG00000015249	GUF1	81	66.845	Echinops_telfairi
ENSCING00000003163	-	99	55.878	ENSEASG00005008712	GUF1	91	55.878	Equus_asinus_asinus
ENSCING00000003163	-	99	55.878	ENSECAG00000019296	GUF1	81	55.878	Equus_caballus
ENSCING00000003163	-	86	48.663	ENSEEUG00000002894	GUF1	80	48.663	Erinaceus_europaeus
ENSCING00000003163	-	99	54.443	ENSELUG00000021933	guf1	99	54.295	Esox_lucius
ENSCING00000003163	-	99	55.897	ENSFCAG00000028580	GUF1	91	55.897	Felis_catus
ENSCING00000003163	-	84	54.579	ENSFALG00000002932	GUF1	99	54.579	Ficedula_albicollis
ENSCING00000003163	-	99	56.149	ENSFDAG00000010613	GUF1	94	58.868	Fukomys_damarensis
ENSCING00000003163	-	99	54.443	ENSFHEG00000016859	guf1	99	52.188	Fundulus_heteroclitus
ENSCING00000003163	-	99	55.089	ENSGMOG00000005706	guf1	94	55.089	Gadus_morhua
ENSCING00000003163	-	99	55.735	ENSGALG00000014217	GUF1	92	55.735	Gallus_gallus
ENSCING00000003163	-	99	55.250	ENSGAFG00000016068	guf1	99	52.674	Gambusia_affinis
ENSCING00000003163	-	99	53.796	ENSGACG00000018700	guf1	98	53.796	Gasterosteus_aculeatus
ENSCING00000003163	-	98	55.700	ENSGAGG00000001879	GUF1	99	55.700	Gopherus_agassizii
ENSCING00000003163	-	100	56.230	ENSGGOG00000001699	GUF1	100	53.045	Gorilla_gorilla
ENSCING00000003163	-	99	53.958	ENSHBUG00000001529	guf1	99	51.702	Haplochromis_burtoni
ENSCING00000003163	-	86	52.319	ENSHGLG00000002637	-	86	52.319	Heterocephalus_glaber_female
ENSCING00000003163	-	99	56.958	ENSHGLG00000014421	-	91	59.623	Heterocephalus_glaber_female
ENSCING00000003163	-	83	53.167	ENSHGLG00100002291	-	87	53.167	Heterocephalus_glaber_male
ENSCING00000003163	-	99	56.958	ENSHGLG00100002522	-	91	59.623	Heterocephalus_glaber_male
ENSCING00000003163	-	98	53.028	ENSHCOG00000004355	guf1	99	50.243	Hippocampus_comes
ENSCING00000003163	-	99	53.312	ENSIPUG00000020387	GUF1	99	51.125	Ictalurus_punctatus
ENSCING00000003163	-	99	56.311	ENSSTOG00000003301	GUF1	92	59.701	Ictidomys_tridecemlineatus
ENSCING00000003163	-	99	56.160	ENSJJAG00000005872	Guf1	99	59.701	Jaculus_jaculus
ENSCING00000003163	-	99	52.800	ENSKMAG00000008683	guf1	90	51.763	Kryptolebias_marmoratus
ENSCING00000003163	-	99	53.958	ENSLBEG00000028126	guf1	99	51.864	Labrus_bergylta
ENSCING00000003163	-	99	54.766	ENSLACG00000007692	GUF1	92	54.502	Latimeria_chalumnae
ENSCING00000003163	-	97	54.215	ENSLOCG00000012397	guf1	89	54.215	Lepisosteus_oculatus
ENSCING00000003163	-	99	57.419	ENSLAFG00000011040	GUF1	91	57.419	Loxodonta_africana
ENSCING00000003163	-	100	56.390	ENSMFAG00000029386	GUF1	100	52.724	Macaca_fascicularis
ENSCING00000003163	-	100	56.390	ENSMMUG00000009270	GUF1	100	52.724	Macaca_mulatta
ENSCING00000003163	-	100	56.390	ENSMNEG00000008365	GUF1	100	52.724	Macaca_nemestrina
ENSCING00000003163	-	100	56.070	ENSMLEG00000033225	GUF1	100	52.404	Mandrillus_leucophaeus
ENSCING00000003163	-	99	53.635	ENSMAMG00000015049	guf1	90	53.635	Mastacembelus_armatus
ENSCING00000003163	-	99	53.796	ENSMZEG00005005816	guf1	99	49.109	Maylandia_zebra
ENSCING00000003163	-	99	55.250	ENSMGAG00000012118	GUF1	94	59.774	Meleagris_gallopavo
ENSCING00000003163	-	99	56.866	ENSMICG00000016714	GUF1	92	56.866	Microcebus_murinus
ENSCING00000003163	-	99	53.722	ENSMOCG00000011627	Guf1	94	53.722	Microtus_ochrogaster
ENSCING00000003163	-	99	49.111	ENSMMOG00000009682	guf1	90	49.111	Mola_mola
ENSCING00000003163	-	99	56.220	ENSMODG00000020592	GUF1	90	56.220	Monodelphis_domestica
ENSCING00000003163	-	99	53.958	ENSMALG00000011894	guf1	97	51.373	Monopterus_albus
ENSCING00000003163	-	99	56.149	MGP_CAROLIEiJ_G0027274	Guf1	92	60.075	Mus_caroli
ENSCING00000003163	-	99	56.311	ENSMUSG00000029208	Guf1	92	60.075	Mus_musculus
ENSCING00000003163	-	99	56.472	MGP_PahariEiJ_G0017055	Guf1	92	60.075	Mus_pahari
ENSCING00000003163	-	99	56.149	MGP_SPRETEiJ_G0028269	Guf1	92	60.075	Mus_spretus
ENSCING00000003163	-	99	56.220	ENSMPUG00000004975	GUF1	91	56.220	Mustela_putorius_furo
ENSCING00000003163	-	99	56.704	ENSMLUG00000002116	GUF1	91	56.704	Myotis_lucifugus
ENSCING00000003163	-	99	56.472	ENSNGAG00000012997	Guf1	92	60.075	Nannospalax_galili
ENSCING00000003163	-	99	51.378	ENSNBRG00000021743	guf1	99	51.378	Neolamprologus_brichardi
ENSCING00000003163	-	99	56.543	ENSNLEG00000017299	GUF1	99	53.323	Nomascus_leucogenys
ENSCING00000003163	-	81	40.828	ENSMEUG00000013023	-	99	40.828	Notamacropus_eugenii
ENSCING00000003163	-	75	43.469	ENSOPRG00000005400	-	73	43.469	Ochotona_princeps
ENSCING00000003163	-	99	56.726	ENSODEG00000000238	GUF1	99	56.726	Octodon_degus
ENSCING00000003163	-	99	54.120	ENSONIG00000015782	guf1	96	54.120	Oreochromis_niloticus
ENSCING00000003163	-	99	54.457	ENSOANG00000007142	GUF1	99	54.457	Ornithorhynchus_anatinus
ENSCING00000003163	-	99	55.897	ENSOCUG00000017915	GUF1	91	55.897	Oryctolagus_cuniculus
ENSCING00000003163	-	99	53.312	ENSORLG00000009541	guf1	96	53.312	Oryzias_latipes
ENSCING00000003163	-	76	57.547	ENSORLG00020019714	guf1	95	57.547	Oryzias_latipes_hni
ENSCING00000003163	-	99	53.150	ENSORLG00015014707	guf1	90	53.150	Oryzias_latipes_hsok
ENSCING00000003163	-	99	53.796	ENSOMEG00000016542	guf1	90	53.796	Oryzias_melastigma
ENSCING00000003163	-	99	53.195	ENSOGAG00000014573	GUF1	96	53.195	Otolemur_garnettii
ENSCING00000003163	-	99	56.058	ENSOARG00000015231	GUF1	91	56.058	Ovis_aries
ENSCING00000003163	-	100	54.473	ENSPPAG00000031418	GUF1	100	51.282	Pan_paniscus
ENSCING00000003163	-	99	55.574	ENSPPRG00000007366	GUF1	91	55.574	Panthera_pardus
ENSCING00000003163	-	99	55.574	ENSPTIG00000009828	GUF1	91	55.574	Panthera_tigris_altaica
ENSCING00000003163	-	100	56.390	ENSPTRG00000016022	GUF1	100	51.282	Pan_troglodytes
ENSCING00000003163	-	100	56.070	ENSPANG00000020532	GUF1	100	52.404	Papio_anubis
ENSCING00000003163	-	99	53.473	ENSPKIG00000000883	guf1	99	47.240	Paramormyrops_kingsleyae
ENSCING00000003163	-	65	58.765	ENSPSIG00000005099	GUF1	95	58.765	Pelodiscus_sinensis
ENSCING00000003163	-	99	50.725	ENSPMGG00000021369	guf1	99	51.047	Periophthalmus_magnuspinnatus
ENSCING00000003163	-	99	53.074	ENSPEMG00000021702	Guf1	95	53.074	Peromyscus_maniculatus_bairdii
ENSCING00000003163	-	70	47.619	ENSPMAG00000007928	guf1	99	47.865	Petromyzon_marinus
ENSCING00000003163	-	99	56.726	ENSPCIG00000028571	GUF1	97	58.801	Phascolarctos_cinereus
ENSCING00000003163	-	99	55.250	ENSPFOG00000006450	guf1	90	55.250	Poecilia_formosa
ENSCING00000003163	-	99	53.440	ENSPLAG00000023710	guf1	91	53.440	Poecilia_latipinna
ENSCING00000003163	-	99	54.120	ENSPMEG00000014175	guf1	91	53.440	Poecilia_mexicana
ENSCING00000003163	-	99	55.250	ENSPMEG00000023603	guf1	90	55.250	Poecilia_mexicana
ENSCING00000003163	-	99	54.927	ENSPREG00000003893	guf1	99	51.053	Poecilia_reticulata
ENSCING00000003163	-	99	56.800	ENSPPYG00000014702	GUF1	91	56.800	Pongo_abelii
ENSCING00000003163	-	99	48.871	ENSPCAG00000016375	GUF1	99	48.871	Procavia_capensis
ENSCING00000003163	-	96	53.333	ENSPVAG00000010262	GUF1	91	53.333	Pteropus_vampyrus
ENSCING00000003163	-	99	53.958	ENSPNYG00000000062	guf1	99	51.702	Pundamilia_nyererei
ENSCING00000003163	-	99	53.623	ENSPNAG00000025157	guf1	99	51.373	Pygocentrus_nattereri
ENSCING00000003163	-	99	56.634	ENSRNOG00000002207	Guf1	92	56.634	Rattus_norvegicus
ENSCING00000003163	-	100	52.866	ENSRBIG00000042292	GUF1	100	51.603	Rhinopithecus_bieti
ENSCING00000003163	-	100	55.911	ENSRROG00000038444	GUF1	100	53.365	Rhinopithecus_roxellana
ENSCING00000003163	-	98	41.894	YLR289W	-	93	41.894	Saccharomyces_cerevisiae
ENSCING00000003163	-	100	56.230	ENSSBOG00000030808	GUF1	91	56.230	Saimiri_boliviensis_boliviensis
ENSCING00000003163	-	99	56.866	ENSSHAG00000003081	GUF1	91	56.866	Sarcophilus_harrisii
ENSCING00000003163	-	99	54.766	ENSSFOG00015004296	guf1	99	51.540	Scleropages_formosus
ENSCING00000003163	-	99	53.312	ENSSMAG00000013101	guf1	99	51.053	Scophthalmus_maximus
ENSCING00000003163	-	99	53.473	ENSSDUG00000013385	guf1	99	51.216	Seriola_dumerili
ENSCING00000003163	-	99	53.473	ENSSLDG00000022775	guf1	96	53.473	Seriola_lalandi_dorsalis
ENSCING00000003163	-	99	55.016	ENSSPUG00000002681	GUF1	91	55.016	Sphenodon_punctatus
ENSCING00000003163	-	99	53.473	ENSSPAG00000010713	guf1	99	51.216	Stegastes_partitus
ENSCING00000003163	-	99	56.866	ENSSSCG00000008807	GUF1	91	56.866	Sus_scrofa
ENSCING00000003163	-	99	54.927	ENSTGUG00000008453	GUF1	98	54.927	Taeniopygia_guttata
ENSCING00000003163	-	99	54.120	ENSTRUG00000007961	guf1	98	51.774	Takifugu_rubripes
ENSCING00000003163	-	99	53.537	ENSTNIG00000004218	guf1	99	53.537	Tetraodon_nigroviridis
ENSCING00000003163	-	57	44.681	ENSTBEG00000016947	-	70	44.681	Tupaia_belangeri
ENSCING00000003163	-	99	53.473	ENSTTRG00000016020	GUF1	91	53.473	Tursiops_truncatus
ENSCING00000003163	-	99	57.027	ENSUAMG00000026589	GUF1	91	57.027	Ursus_americanus
ENSCING00000003163	-	99	57.027	ENSUMAG00000001595	GUF1	89	57.027	Ursus_maritimus
ENSCING00000003163	-	99	56.704	ENSVPAG00000011078	GUF1	91	56.704	Vicugna_pacos
ENSCING00000003163	-	99	56.564	ENSVVUG00000023099	GUF1	99	56.564	Vulpes_vulpes
ENSCING00000003163	-	99	55.250	ENSXETG00000008432	guf1	98	55.250	Xenopus_tropicalis
ENSCING00000003163	-	99	52.427	ENSXCOG00000008816	guf1	99	52.427	Xiphophorus_couchianus
ENSCING00000003163	-	99	55.250	ENSXMAG00000004189	guf1	99	52.674	Xiphophorus_maculatus