EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003235 (Gene tree)
Gene ID: 100176468
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4828 bases
Position: chr9:1729005-1733832
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006624	ResIII	PF04851.15	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006624	-	4342	-	ENSCINP00000006624	1328 (aa)	-	F6ZP18

Gene Model

Click here to download ENSCING00000003235's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003235	-	99	61.849	ENSG00000021776	AQR	92	61.849	Homo_sapiens
ENSCING00000003235	-	99	61.943	ENSAPOG00000011277	aqr	97	62.780	Acanthochromis_polyacanthus
ENSCING00000003235	-	99	61.668	ENSAMEG00000005194	AQR	91	61.668	Ailuropoda_melanoleuca
ENSCING00000003235	-	96	62.119	ENSACIG00000015226	aqr	98	62.119	Amphilophus_citrinellus
ENSCING00000003235	-	99	61.870	ENSAOCG00000018671	aqr	95	63.805	Amphiprion_ocellaris
ENSCING00000003235	-	99	61.797	ENSAPEG00000015999	aqr	93	61.797	Amphiprion_percula
ENSCING00000003235	-	99	61.651	ENSATEG00000010820	aqr	93	61.651	Anabas_testudineus
ENSCING00000003235	-	97	63.444	ENSAPLG00000008144	AQR	99	63.747	Anas_platyrhynchos
ENSCING00000003235	-	99	62.381	ENSACAG00000000687	AQR	92	62.381	Anolis_carolinensis
ENSCING00000003235	-	99	61.189	ENSANAG00000035427	AQR	96	62.105	Aotus_nancymaae
ENSCING00000003235	-	99	61.814	ENSACLG00000012554	aqr	92	61.814	Astatotilapia_calliptera
ENSCING00000003235	-	99	62.079	ENSAMXG00000014751	aqr	99	62.006	Astyanax_mexicanus
ENSCING00000003235	-	99	61.877	ENSBTAG00000012712	AQR	92	61.877	Bos_taurus
ENSCING00000003235	-	99	61.849	ENSCJAG00000021021	AQR	91	61.849	Callithrix_jacchus
ENSCING00000003235	-	99	61.042	ENSCAFG00020006355	AQR	96	61.955	Canis_lupus_dingo
ENSCING00000003235	-	99	61.144	ENSCHIG00000025362	AQR	93	61.144	Capra_hircus
ENSCING00000003235	-	99	61.115	ENSTSYG00000004244	AQR	89	69.865	Carlito_syrichta
ENSCING00000003235	-	70	57.390	ENSCAPG00000016131	AQR	97	57.390	Cavia_aperea
ENSCING00000003235	-	99	59.134	ENSCCAG00000018954	AQR	97	60.000	Cebus_capucinus
ENSCING00000003235	-	99	61.663	ENSCATG00000040332	AQR	92	61.663	Cercocebus_atys
ENSCING00000003235	-	90	77.632	ENSCLAG00000007219	AQR	96	77.632	Chinchilla_lanigera
ENSCING00000003235	-	99	61.849	ENSCSAG00000007154	AQR	91	61.849	Chlorocebus_sabaeus
ENSCING00000003235	-	99	62.408	ENSCPBG00000023856	AQR	93	69.597	Chrysemys_picta_bellii
ENSCING00000003235	-	99	86.782	ENSCSAVG00000009111	-	99	86.782	Ciona_savignyi
ENSCING00000003235	-	99	60.822	ENSCANG00000042952	AQR	92	60.822	Colobus_angolensis_palliatus
ENSCING00000003235	-	99	61.849	ENSCGRG00001020556	Aqr	92	61.849	Cricetulus_griseus_chok1gshd
ENSCING00000003235	-	99	61.849	ENSCGRG00000007912	Aqr	92	61.849	Cricetulus_griseus_crigri
ENSCING00000003235	-	96	62.623	ENSCSEG00000004847	aqr	95	62.623	Cynoglossus_semilaevis
ENSCING00000003235	-	99	61.696	ENSCVAG00000003393	aqr	96	62.519	Cyprinodon_variegatus
ENSCING00000003235	-	97	61.527	ENSDARG00000016775	aqr	87	61.377	Danio_rerio
ENSCING00000003235	-	99	59.491	ENSDNOG00000013414	AQR	98	56.468	Dasypus_novemcinctus
ENSCING00000003235	-	99	61.584	ENSDORG00000015152	Aqr	92	61.584	Dipodomys_ordii
ENSCING00000003235	-	99	57.822	FBgn0051368	CG31368	92	57.895	Drosophila_melanogaster
ENSCING00000003235	-	83	75.610	ENSEBUG00000015201	aqr	90	75.610	Eptatretus_burgeri
ENSCING00000003235	-	99	61.804	ENSEASG00005016758	AQR	91	61.804	Equus_asinus_asinus
ENSCING00000003235	-	99	61.877	ENSECAG00000016399	AQR	91	68.940	Equus_caballus
ENSCING00000003235	-	94	66.957	ENSEEUG00000003975	AQR	85	66.957	Erinaceus_europaeus
ENSCING00000003235	-	99	60.787	ENSELUG00000001544	aqr	93	62.074	Esox_lucius
ENSCING00000003235	-	99	61.804	ENSFCAG00000014069	AQR	92	61.804	Felis_catus
ENSCING00000003235	-	95	63.914	ENSFALG00000005683	AQR	94	63.914	Ficedula_albicollis
ENSCING00000003235	-	99	61.758	ENSFDAG00000000252	AQR	92	61.758	Fukomys_damarensis
ENSCING00000003235	-	99	61.156	ENSFHEG00000020202	aqr	97	61.231	Fundulus_heteroclitus
ENSCING00000003235	-	99	61.022	ENSGMOG00000009823	aqr	93	61.123	Gadus_morhua
ENSCING00000003235	-	99	62.188	ENSGALG00000009838	AQR	90	62.408	Gallus_gallus
ENSCING00000003235	-	99	61.448	ENSGAFG00000019657	aqr	92	61.522	Gambusia_affinis
ENSCING00000003235	-	99	61.919	ENSGACG00000010437	aqr	100	61.697	Gasterosteus_aculeatus
ENSCING00000003235	-	99	62.555	ENSGAGG00000019581	AQR	93	62.555	Gopherus_agassizii
ENSCING00000003235	-	98	62.249	ENSGGOG00000014073	AQR	94	63.040	Gorilla_gorilla
ENSCING00000003235	-	99	61.887	ENSHBUG00000017573	aqr	93	62.120	Haplochromis_burtoni
ENSCING00000003235	-	99	61.905	ENSHGLG00000013912	AQR	97	62.030	Heterocephalus_glaber_female
ENSCING00000003235	-	99	61.905	ENSHGLG00100005299	AQR	97	62.030	Heterocephalus_glaber_male
ENSCING00000003235	-	98	61.099	ENSHCOG00000001340	aqr	97	61.172	Hippocampus_comes
ENSCING00000003235	-	99	61.201	ENSIPUG00000006431	aqr	91	62.833	Ictalurus_punctatus
ENSCING00000003235	-	99	61.821	ENSSTOG00000024444	AQR	96	62.227	Ictidomys_tridecemlineatus
ENSCING00000003235	-	99	61.538	ENSJJAG00000018777	Aqr	92	61.538	Jaculus_jaculus
ENSCING00000003235	-	99	61.842	ENSKMAG00000011179	aqr	94	61.842	Kryptolebias_marmoratus
ENSCING00000003235	-	99	62.016	ENSLBEG00000028346	aqr	98	63.943	Labrus_bergylta
ENSCING00000003235	-	99	62.307	ENSLACG00000012039	AQR	93	62.307	Latimeria_chalumnae
ENSCING00000003235	-	99	61.999	ENSLOCG00000012184	aqr	94	61.999	Lepisosteus_oculatus
ENSCING00000003235	-	99	61.522	ENSLAFG00000017667	AQR	92	61.522	Loxodonta_africana
ENSCING00000003235	-	99	61.340	ENSMFAG00000030453	AQR	85	70.359	Macaca_fascicularis
ENSCING00000003235	-	99	61.849	ENSMMUG00000002337	AQR	92	61.189	Macaca_mulatta
ENSCING00000003235	-	97	62.556	ENSMNEG00000031809	AQR	92	62.901	Macaca_nemestrina
ENSCING00000003235	-	99	61.189	ENSMLEG00000043611	AQR	91	61.189	Mandrillus_leucophaeus
ENSCING00000003235	-	99	62.016	ENSMAMG00000005722	aqr	96	62.899	Mastacembelus_armatus
ENSCING00000003235	-	99	61.887	ENSMZEG00005002419	aqr	93	61.887	Maylandia_zebra
ENSCING00000003235	-	99	60.293	ENSMGAG00000012303	AQR	96	60.293	Meleagris_gallopavo
ENSCING00000003235	-	84	63.417	ENSMAUG00000021062	Aqr	89	63.417	Mesocricetus_auratus
ENSCING00000003235	-	99	61.702	ENSMICG00000016979	AQR	92	61.042	Microcebus_murinus
ENSCING00000003235	-	99	61.115	ENSMOCG00000001431	Aqr	96	62.030	Microtus_ochrogaster
ENSCING00000003235	-	95	60.333	ENSMMOG00000009958	aqr	91	60.333	Mola_mola
ENSCING00000003235	-	99	62.013	ENSMODG00000001369	AQR	92	62.335	Monodelphis_domestica
ENSCING00000003235	-	92	60.489	ENSMALG00000016665	aqr	94	60.489	Monopterus_albus
ENSCING00000003235	-	99	61.775	MGP_CAROLIEiJ_G0024103	Aqr	95	62.707	Mus_caroli
ENSCING00000003235	-	99	61.522	ENSMUSG00000040383	Aqr	96	62.277	Mus_musculus
ENSCING00000003235	-	99	61.702	MGP_PahariEiJ_G0025546	Aqr	95	62.632	Mus_pahari
ENSCING00000003235	-	99	61.702	MGP_SPRETEiJ_G0025019	Aqr	95	62.632	Mus_spretus
ENSCING00000003235	-	99	61.775	ENSMPUG00000008166	AQR	91	61.775	Mustela_putorius_furo
ENSCING00000003235	-	99	61.775	ENSMLUG00000006223	AQR	91	61.775	Myotis_lucifugus
ENSCING00000003235	-	99	61.217	ENSNGAG00000017515	Aqr	92	61.217	Nannospalax_galili
ENSCING00000003235	-	97	62.146	ENSNBRG00000023535	aqr	98	61.880	Neolamprologus_brichardi
ENSCING00000003235	-	99	61.702	ENSNLEG00000011180	AQR	92	61.702	Nomascus_leucogenys
ENSCING00000003235	-	73	60.140	ENSMEUG00000011715	AQR	76	60.140	Notamacropus_eugenii
ENSCING00000003235	-	79	69.330	ENSOPRG00000016495	AQR	74	69.330	Ochotona_princeps
ENSCING00000003235	-	99	61.780	ENSONIG00000001395	aqr	93	61.780	Oreochromis_niloticus
ENSCING00000003235	-	99	61.922	ENSOCUG00000003488	AQR	91	61.922	Oryctolagus_cuniculus
ENSCING00000003235	-	99	60.832	ENSORLG00000013184	aqr	99	61.809	Oryzias_latipes
ENSCING00000003235	-	99	60.832	ENSORLG00020017700	aqr	93	61.809	Oryzias_latipes_hni
ENSCING00000003235	-	99	60.696	ENSORLG00015000439	aqr	99	59.446	Oryzias_latipes_hsok
ENSCING00000003235	-	99	61.724	ENSOMEG00000014207	aqr	98	61.404	Oryzias_melastigma
ENSCING00000003235	-	99	60.248	ENSOGAG00000016007	AQR	91	60.248	Otolemur_garnettii
ENSCING00000003235	-	99	61.877	ENSOARG00000020005	AQR	92	61.877	Ovis_aries
ENSCING00000003235	-	99	61.849	ENSPPAG00000030601	AQR	92	61.849	Pan_paniscus
ENSCING00000003235	-	99	61.804	ENSPPRG00000008641	AQR	92	61.804	Panthera_pardus
ENSCING00000003235	-	99	61.804	ENSPTIG00000018387	AQR	92	61.804	Panthera_tigris_altaica
ENSCING00000003235	-	99	61.849	ENSPTRG00000006891	AQR	97	62.105	Pan_troglodytes
ENSCING00000003235	-	99	61.922	ENSPANG00000019671	AQR	91	61.922	Papio_anubis
ENSCING00000003235	-	96	61.527	ENSPKIG00000003825	aqr	99	61.325	Paramormyrops_kingsleyae
ENSCING00000003235	-	99	62.821	ENSPSIG00000007656	AQR	92	62.821	Pelodiscus_sinensis
ENSCING00000003235	-	97	61.969	ENSPMGG00000000136	aqr	93	61.820	Periophthalmus_magnuspinnatus
ENSCING00000003235	-	99	58.824	ENSPEMG00000016395	Aqr	92	58.824	Peromyscus_maniculatus_bairdii
ENSCING00000003235	-	99	62.408	ENSPCIG00000021761	AQR	88	62.408	Phascolarctos_cinereus
ENSCING00000003235	-	99	61.522	ENSPFOG00000015147	aqr	93	61.595	Poecilia_formosa
ENSCING00000003235	-	99	61.522	ENSPLAG00000021235	aqr	97	63.234	Poecilia_latipinna
ENSCING00000003235	-	99	61.522	ENSPMEG00000004188	aqr	96	63.963	Poecilia_mexicana
ENSCING00000003235	-	92	63.808	ENSPREG00000007197	aqr	96	63.887	Poecilia_reticulata
ENSCING00000003235	-	99	61.595	ENSPPYG00000006319	AQR	92	61.887	Pongo_abelii
ENSCING00000003235	-	99	55.819	ENSPCOG00000021390	AQR	91	55.745	Propithecus_coquereli
ENSCING00000003235	-	99	61.814	ENSPNYG00000016598	aqr	98	62.247	Pundamilia_nyererei
ENSCING00000003235	-	94	63.693	ENSPNAG00000001173	aqr	99	63.073	Pygocentrus_nattereri
ENSCING00000003235	-	99	61.775	ENSRNOG00000008912	Aqr	92	61.775	Rattus_norvegicus
ENSCING00000003235	-	99	61.070	ENSRBIG00000038017	AQR	97	61.983	Rhinopithecus_bieti
ENSCING00000003235	-	99	61.849	ENSRROG00000044173	AQR	91	61.849	Rhinopithecus_roxellana
ENSCING00000003235	-	99	61.849	ENSSBOG00000000986	AQR	91	61.849	Saimiri_boliviensis_boliviensis
ENSCING00000003235	-	99	62.142	ENSSHAG00000016987	AQR	92	62.362	Sarcophilus_harrisii
ENSCING00000003235	-	99	61.780	ENSSFOG00015010484	aqr	96	64.173	Scleropages_formosus
ENSCING00000003235	-	99	61.724	ENSSMAG00000018736	aqr	96	59.451	Scophthalmus_maximus
ENSCING00000003235	-	99	61.724	ENSSDUG00000015005	aqr	96	63.050	Seriola_dumerili
ENSCING00000003235	-	96	63.126	ENSSLDG00000021156	aqr	98	62.491	Seriola_lalandi_dorsalis
ENSCING00000003235	-	99	61.943	ENSSPAG00000015693	aqr	95	63.126	Stegastes_partitus
ENSCING00000003235	-	99	61.804	ENSSSCG00000004802	AQR	91	61.804	Sus_scrofa
ENSCING00000003235	-	99	62.418	ENSTGUG00000011770	AQR	96	62.418	Taeniopygia_guttata
ENSCING00000003235	-	99	61.326	ENSTRUG00000014255	aqr	93	61.326	Takifugu_rubripes
ENSCING00000003235	-	99	60.873	ENSTNIG00000017238	aqr	93	60.873	Tetraodon_nigroviridis
ENSCING00000003235	-	99	61.217	ENSTTRG00000014800	AQR	92	61.217	Tursiops_truncatus
ENSCING00000003235	-	99	61.144	ENSUAMG00000015052	AQR	92	63.956	Ursus_americanus
ENSCING00000003235	-	99	61.804	ENSUMAG00000015725	AQR	91	61.804	Ursus_maritimus
ENSCING00000003235	-	99	61.555	ENSVPAG00000010622	AQR	92	61.555	Vicugna_pacos
ENSCING00000003235	-	99	61.849	ENSVVUG00000026312	AQR	92	61.849	Vulpes_vulpes
ENSCING00000003235	-	97	62.519	ENSXETG00000012901	aqr	90	62.669	Xenopus_tropicalis
ENSCING00000003235	-	99	61.302	ENSXMAG00000009596	aqr	93	61.375	Xiphophorus_maculatus