EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003237 (Gene tree)
Gene ID: 100180196
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3433 bases
Position: chr5:3229305-3232737
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006629	PRP38	PF03371.15	2.7e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006629	-	1542	-	ENSCINP00000006629	323 (aa)	-	F6ZP02

Gene Model

Click here to download ENSCING00000003237's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003237's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003237	-	72	62.500	ENSETEG00000005105	-	80	63.596	Echinops_telfairi
ENSCING00000003237	-	54	58.960	ENSGGOG00000038620	-	53	58.960	Gorilla_gorilla
ENSCING00000003237	-	81	57.143	ENSMODG00000016780	-	69	72.500	Monodelphis_domestica
ENSCING00000003237	-	72	67.811	ENSMLUG00000001053	-	73	68.996	Myotis_lucifugus
ENSCING00000003237	-	87	52.560	ENSPTRG00000051767	-	56	65.318	Pan_troglodytes