EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003239 (Gene tree)
Gene ID: 100182540
Gene Symbol: -
Alias: -
Full Name: superkiller viralicidic activity 2-like 2
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 9260 bases
Position: chr5:3232044-3241303
Accession: 100182540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006656	rRNA_proc-arch	PF13234.6	2.4e-80	1	1
ENSCINP00000006656	DEAD	PF00270.29	2.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006656	-	3395	XM_002131133	ENSCINP00000006656	1030 (aa)	XP_002131169	F6Z5U4

Gene Model

Click here to download ENSCING00000003239's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003239	-	99	66.252	ENSG00000039123	MTREX	99	66.444	Homo_sapiens
ENSCING00000003239	-	99	65.613	ENSAPOG00000007814	mtrex	99	65.134	Acanthochromis_polyacanthus
ENSCING00000003239	-	99	66.380	ENSAMEG00000013856	MTREX	99	66.380	Ailuropoda_melanoleuca
ENSCING00000003239	-	93	68.750	ENSACIG00000015117	mtrex	96	68.750	Amphilophus_citrinellus
ENSCING00000003239	-	99	65.544	ENSAOCG00000011884	mtrex	99	65.134	Amphiprion_ocellaris
ENSCING00000003239	-	99	65.421	ENSAPEG00000019384	mtrex	99	65.038	Amphiprion_percula
ENSCING00000003239	-	99	65.255	ENSATEG00000015117	mtrex	99	64.436	Anabas_testudineus
ENSCING00000003239	-	95	68.916	ENSAPLG00000009694	MTREX	97	69.453	Anas_platyrhynchos
ENSCING00000003239	-	99	67.785	ENSACAG00000015200	MTREX	96	67.785	Anolis_carolinensis
ENSCING00000003239	-	99	66.508	ENSANAG00000023095	MTREX	99	66.444	Aotus_nancymaae
ENSCING00000003239	-	99	65.421	ENSACLG00000001921	mtrex	99	65.230	Astatotilapia_calliptera
ENSCING00000003239	-	96	65.000	ENSAMXG00000018751	mtrex	99	65.486	Astyanax_mexicanus
ENSCING00000003239	-	99	66.571	ENSBTAG00000010518	MTREX	99	66.571	Bos_taurus
ENSCING00000003239	-	91	52.497	WBGene00012342	mtr-4	93	51.871	Caenorhabditis_elegans
ENSCING00000003239	-	99	65.655	ENSCJAG00000001773	MTREX	97	66.181	Callithrix_jacchus
ENSCING00000003239	-	99	66.348	ENSCAFG00000006818	MTREX	99	66.444	Canis_familiaris
ENSCING00000003239	-	99	66.348	ENSCAFG00020024352	MTREX	99	66.444	Canis_lupus_dingo
ENSCING00000003239	-	99	66.348	ENSCHIG00000024413	MTREX	99	66.444	Capra_hircus
ENSCING00000003239	-	94	65.954	ENSTSYG00000007389	MTREX	99	65.954	Carlito_syrichta
ENSCING00000003239	-	90	58.278	ENSCAPG00000008696	MTREX	93	57.451	Cavia_aperea
ENSCING00000003239	-	99	66.444	ENSCPOG00000009797	MTREX	99	66.698	Cavia_porcellus
ENSCING00000003239	-	99	66.508	ENSCCAG00000014177	MTREX	99	66.444	Cebus_capucinus
ENSCING00000003239	-	99	66.252	ENSCATG00000042153	MTREX	99	66.444	Cercocebus_atys
ENSCING00000003239	-	99	66.603	ENSCLAG00000006622	MTREX	99	66.603	Chinchilla_lanigera
ENSCING00000003239	-	99	63.489	ENSCSAG00000016445	MTREX	99	63.680	Chlorocebus_sabaeus
ENSCING00000003239	-	54	93.056	ENSCHOG00000010936	-	61	93.056	Choloepus_hoffmanni
ENSCING00000003239	-	99	66.857	ENSCPBG00000026551	MTREX	93	66.730	Chrysemys_picta_bellii
ENSCING00000003239	-	100	90.173	ENSCSAVG00000009304	-	100	92.708	Ciona_savignyi
ENSCING00000003239	-	99	66.922	ENSCANG00000035770	MTREX	99	66.922	Colobus_angolensis_palliatus
ENSCING00000003239	-	99	66.411	ENSCGRG00001024680	Mtrex	99	66.380	Cricetulus_griseus_chok1gshd
ENSCING00000003239	-	99	66.411	ENSCGRG00000000307	Mtrex	99	66.380	Cricetulus_griseus_crigri
ENSCING00000003239	-	99	65.388	ENSCSEG00000018621	mtrex	98	65.388	Cynoglossus_semilaevis
ENSCING00000003239	-	99	65.388	ENSCVAG00000004556	mtrex	99	65.484	Cyprinodon_variegatus
ENSCING00000003239	-	99	66.539	ENSDARG00000013457	mtrex	99	66.924	Danio_rerio
ENSCING00000003239	-	99	66.286	ENSDNOG00000015375	MTREX	99	66.286	Dasypus_novemcinctus
ENSCING00000003239	-	99	66.252	ENSDORG00000006782	Mtrex	99	66.444	Dipodomys_ordii
ENSCING00000003239	-	91	62.354	FBgn0001986	Mtr4	89	62.354	Drosophila_melanogaster
ENSCING00000003239	-	75	66.250	ENSETEG00000000727	MTREX	74	66.250	Echinops_telfairi
ENSCING00000003239	-	100	65.959	ENSEBUG00000012869	mtrex	100	65.959	Eptatretus_burgeri
ENSCING00000003239	-	99	66.061	ENSEASG00005013270	MTREX	99	66.252	Equus_asinus_asinus
ENSCING00000003239	-	94	71.759	ENSECAG00000023723	MTREX	99	71.759	Equus_caballus
ENSCING00000003239	-	98	59.961	ENSEEUG00000000527	MTREX	99	60.544	Erinaceus_europaeus
ENSCING00000003239	-	99	66.732	ENSELUG00000004898	mtrex	100	70.742	Esox_lucius
ENSCING00000003239	-	99	66.348	ENSFCAG00000010575	MTREX	99	66.348	Felis_catus
ENSCING00000003239	-	99	66.315	ENSFALG00000010850	MTREX	99	66.667	Ficedula_albicollis
ENSCING00000003239	-	99	66.475	ENSFDAG00000011199	MTREX	99	66.379	Fukomys_damarensis
ENSCING00000003239	-	99	66.118	ENSFHEG00000023014	mtrex	99	66.118	Fundulus_heteroclitus
ENSCING00000003239	-	99	64.541	ENSGMOG00000014702	mtrex	91	70.403	Gadus_morhua
ENSCING00000003239	-	99	66.989	ENSGALG00000014709	MTREX	86	66.989	Gallus_gallus
ENSCING00000003239	-	99	65.774	ENSGAFG00000012425	mtrex	99	65.772	Gambusia_affinis
ENSCING00000003239	-	99	65.038	ENSGACG00000016260	mtrex	96	70.130	Gasterosteus_aculeatus
ENSCING00000003239	-	99	67.274	ENSGAGG00000020036	MTREX	99	67.308	Gopherus_agassizii
ENSCING00000003239	-	99	66.252	ENSGGOG00000001867	MTREX	99	66.444	Gorilla_gorilla
ENSCING00000003239	-	99	65.421	ENSHBUG00000006229	mtrex	99	65.230	Haplochromis_burtoni
ENSCING00000003239	-	99	66.221	ENSHGLG00000019445	SKIV2L2	99	66.508	Heterocephalus_glaber_female
ENSCING00000003239	-	99	66.221	ENSHGLG00100011833	SKIV2L2	99	66.508	Heterocephalus_glaber_male
ENSCING00000003239	-	93	67.442	ENSHCOG00000019995	mtrex	100	67.442	Hippocampus_comes
ENSCING00000003239	-	99	66.763	ENSIPUG00000024348	skiv2l2	99	66.763	Ictalurus_punctatus
ENSCING00000003239	-	99	65.966	ENSSTOG00000010802	MTREX	99	66.252	Ictidomys_tridecemlineatus
ENSCING00000003239	-	99	63.158	ENSJJAG00000020975	Mtrex	99	63.558	Jaculus_jaculus
ENSCING00000003239	-	99	65.868	ENSKMAG00000012642	mtrex	99	65.725	Kryptolebias_marmoratus
ENSCING00000003239	-	99	65.706	ENSLBEG00000019367	mtrex	99	68.427	Labrus_bergylta
ENSCING00000003239	-	99	66.890	ENSLACG00000009075	MTREX	99	67.212	Latimeria_chalumnae
ENSCING00000003239	-	99	67.764	ENSLOCG00000010186	mtrex	99	67.764	Lepisosteus_oculatus
ENSCING00000003239	-	99	64.672	ENSLAFG00000010497	MTREX	99	64.689	Loxodonta_africana
ENSCING00000003239	-	99	66.252	ENSMFAG00000031610	MTREX	99	66.444	Macaca_fascicularis
ENSCING00000003239	-	99	65.935	ENSMMUG00000010379	MTREX	99	66.412	Macaca_mulatta
ENSCING00000003239	-	99	66.252	ENSMNEG00000032746	MTREX	99	66.444	Macaca_nemestrina
ENSCING00000003239	-	99	66.252	ENSMLEG00000041051	MTREX	99	66.444	Mandrillus_leucophaeus
ENSCING00000003239	-	93	69.199	ENSMAMG00000016753	mtrex	96	69.199	Mastacembelus_armatus
ENSCING00000003239	-	99	65.421	ENSMZEG00005000414	mtrex	99	65.230	Maylandia_zebra
ENSCING00000003239	-	91	52.698	ENSMGAG00000003980	MTREX	95	52.698	Meleagris_gallopavo
ENSCING00000003239	-	99	66.316	ENSMAUG00000010727	Mtrex	99	66.380	Mesocricetus_auratus
ENSCING00000003239	-	99	66.252	ENSMICG00000012779	MTREX	99	66.444	Microcebus_murinus
ENSCING00000003239	-	99	65.966	ENSMOCG00000019886	Mtrex	99	66.126	Microtus_ochrogaster
ENSCING00000003239	-	99	64.888	ENSMMOG00000002476	mtrex	99	64.888	Mola_mola
ENSCING00000003239	-	99	67.213	ENSMODG00000019494	MTREX	99	67.020	Monodelphis_domestica
ENSCING00000003239	-	93	65.816	ENSMALG00000002917	mtrex	98	65.816	Monopterus_albus
ENSCING00000003239	-	99	66.188	MGP_CAROLIEiJ_G0018896	Mtrex	99	66.348	Mus_caroli
ENSCING00000003239	-	99	66.092	ENSMUSG00000016018	Mtrex	99	66.252	Mus_musculus
ENSCING00000003239	-	99	66.188	MGP_PahariEiJ_G0015967	Mtrex	99	66.348	Mus_pahari
ENSCING00000003239	-	99	66.092	MGP_SPRETEiJ_G0019775	Mtrex	99	66.252	Mus_spretus
ENSCING00000003239	-	99	66.157	ENSMPUG00000007619	MTREX	99	66.348	Mustela_putorius_furo
ENSCING00000003239	-	99	66.189	ENSMLUG00000001152	MTREX	99	66.476	Myotis_lucifugus
ENSCING00000003239	-	99	66.444	ENSNGAG00000011938	Mtrex	99	66.539	Nannospalax_galili
ENSCING00000003239	-	99	65.517	ENSNBRG00000011293	mtrex	99	65.326	Neolamprologus_brichardi
ENSCING00000003239	-	99	63.619	ENSNLEG00000001494	MTREX	99	64.286	Nomascus_leucogenys
ENSCING00000003239	-	83	86.275	ENSMEUG00000006496	-	67	86.275	Notamacropus_eugenii
ENSCING00000003239	-	99	54.650	ENSOPRG00000008009	MTREX	99	54.267	Ochotona_princeps
ENSCING00000003239	-	99	66.126	ENSODEG00000017234	MTREX	99	66.221	Octodon_degus
ENSCING00000003239	-	99	65.421	ENSONIG00000007587	mtrex	99	65.230	Oreochromis_niloticus
ENSCING00000003239	-	50	64.217	ENSOANG00000004885	-	99	64.217	Ornithorhynchus_anatinus
ENSCING00000003239	-	99	66.571	ENSOCUG00000004463	MTREX	99	66.858	Oryctolagus_cuniculus
ENSCING00000003239	-	99	65.292	ENSORLG00000005443	mtrex	99	65.292	Oryzias_latipes
ENSCING00000003239	-	99	65.197	ENSORLG00020006329	mtrex	99	65.197	Oryzias_latipes_hni
ENSCING00000003239	-	99	65.263	ENSORLG00015012924	mtrex	99	64.981	Oryzias_latipes_hsok
ENSCING00000003239	-	99	65.105	ENSOMEG00000008825	mtrex	99	65.105	Oryzias_melastigma
ENSCING00000003239	-	99	66.061	ENSOGAG00000002886	MTREX	99	66.826	Otolemur_garnettii
ENSCING00000003239	-	99	66.158	ENSOARG00000007764	MTREX	99	66.254	Ovis_aries
ENSCING00000003239	-	99	66.252	ENSPPAG00000039291	MTREX	99	66.444	Pan_paniscus
ENSCING00000003239	-	99	66.348	ENSPPRG00000019701	MTREX	99	66.348	Panthera_pardus
ENSCING00000003239	-	99	64.914	ENSPTIG00000009313	MTREX	99	64.914	Panthera_tigris_altaica
ENSCING00000003239	-	99	66.252	ENSPTRG00000016878	MTREX	99	66.444	Pan_troglodytes
ENSCING00000003239	-	99	66.157	ENSPANG00000009697	MTREX	99	66.348	Papio_anubis
ENSCING00000003239	-	99	67.726	ENSPKIG00000020833	mtrex	99	67.726	Paramormyrops_kingsleyae
ENSCING00000003239	-	99	66.889	ENSPSIG00000012150	MTREX	99	66.762	Pelodiscus_sinensis
ENSCING00000003239	-	99	65.731	ENSPMGG00000002582	mtrex	99	65.634	Periophthalmus_magnuspinnatus
ENSCING00000003239	-	95	58.224	ENSPMAG00000009668	mtrex	99	58.224	Petromyzon_marinus
ENSCING00000003239	-	93	70.964	ENSPCIG00000024730	MTREX	100	70.964	Phascolarctos_cinereus
ENSCING00000003239	-	77	68.176	ENSPFOG00000003141	mtrex	99	68.182	Poecilia_formosa
ENSCING00000003239	-	99	65.425	ENSPLAG00000021311	mtrex	99	65.275	Poecilia_latipinna
ENSCING00000003239	-	93	68.372	ENSPMEG00000010597	mtrex	99	68.580	Poecilia_mexicana
ENSCING00000003239	-	99	65.807	ENSPREG00000003089	mtrex	99	65.709	Poecilia_reticulata
ENSCING00000003239	-	98	65.986	ENSPPYG00000015469	MTREX	97	66.181	Pongo_abelii
ENSCING00000003239	-	94	61.395	ENSPCAG00000013120	MTREX	94	61.395	Procavia_capensis
ENSCING00000003239	-	99	62.264	ENSPCOG00000018092	MTREX	99	62.369	Propithecus_coquereli
ENSCING00000003239	-	99	66.124	ENSPVAG00000002445	MTREX	99	66.316	Pteropus_vampyrus
ENSCING00000003239	-	99	65.326	ENSPNYG00000006164	mtrex	99	65.134	Pundamilia_nyererei
ENSCING00000003239	-	99	66.410	ENSPNAG00000008794	mtrex	99	66.506	Pygocentrus_nattereri
ENSCING00000003239	-	98	65.695	ENSRNOG00000010125	Mtrex	96	65.792	Rattus_norvegicus
ENSCING00000003239	-	99	64.532	ENSRBIG00000034930	MTREX	99	64.818	Rhinopithecus_bieti
ENSCING00000003239	-	99	66.157	ENSRROG00000039895	MTREX	99	66.444	Rhinopithecus_roxellana
ENSCING00000003239	-	91	53.556	YJL050W	MTR4	89	53.556	Saccharomyces_cerevisiae
ENSCING00000003239	-	100	66.796	ENSSBOG00000026693	MTREX	99	66.444	Saimiri_boliviensis_boliviensis
ENSCING00000003239	-	93	70.772	ENSSHAG00000004600	MTREX	95	70.772	Sarcophilus_harrisii
ENSCING00000003239	-	99	68.077	ENSSFOG00015014355	skiv2l2	99	68.077	Scleropages_formosus
ENSCING00000003239	-	99	65.673	ENSSMAG00000007572	mtrex	99	64.909	Scophthalmus_maximus
ENSCING00000003239	-	99	65.201	ENSSDUG00000023789	mtrex	99	65.201	Seriola_dumerili
ENSCING00000003239	-	99	65.167	ENSSLDG00000006301	mtrex	95	68.607	Seriola_lalandi_dorsalis
ENSCING00000003239	-	93	70.146	ENSSARG00000008387	MTREX	91	70.146	Sorex_araneus
ENSCING00000003239	-	90	67.216	ENSSPUG00000007071	MTREX	95	67.216	Sphenodon_punctatus
ENSCING00000003239	-	99	65.725	ENSSPAG00000011319	mtrex	99	66.018	Stegastes_partitus
ENSCING00000003239	-	99	66.348	ENSSSCG00000016911	MTREX	99	66.444	Sus_scrofa
ENSCING00000003239	-	99	66.411	ENSTGUG00000002480	MTREX	99	66.411	Taeniopygia_guttata
ENSCING00000003239	-	99	65.134	ENSTRUG00000014571	mtrex	99	65.670	Takifugu_rubripes
ENSCING00000003239	-	89	61.379	ENSTBEG00000007769	MTREX	87	61.379	Tupaia_belangeri
ENSCING00000003239	-	99	66.475	ENSTTRG00000008678	MTREX	99	66.475	Tursiops_truncatus
ENSCING00000003239	-	99	66.539	ENSUAMG00000023061	MTREX	99	66.539	Ursus_americanus
ENSCING00000003239	-	99	66.538	ENSUMAG00000009373	MTREX	99	71.575	Ursus_maritimus
ENSCING00000003239	-	99	58.891	ENSVPAG00000011174	MTREX	99	58.891	Vicugna_pacos
ENSCING00000003239	-	99	66.252	ENSVVUG00000021337	MTREX	99	66.348	Vulpes_vulpes
ENSCING00000003239	-	99	66.988	ENSXETG00000032798	MTREX	99	66.473	Xenopus_tropicalis
ENSCING00000003239	-	99	65.964	ENSXMAG00000004799	mtrex	99	66.059	Xiphophorus_maculatus